Gene
Gene Model ID | aug_v2a.14504 |
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Locus | scaf6077 : 13230 ... 17855 : - |
To GenomeBrowser | scaf6077:13230..17855 |
Genes list of scaffold | scaf6077 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 75 |
Description | This gene model contains Retrotrans_gag, SCAN and RVT_1 domains. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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uncharacterized protein loc100372741 | GO:0005488 GO:0044260 GO:0090304 |
Transcript
Transcript ID | aug_v2a.14504.t1 |
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Definition | - |
>aug_v2a.14504.t1 gataattgaggaaattagaaatggaggcggaactcgtgagacagaaggaggctgctgaggccgccaagagaggccacgaa ctagaacttaaccgtttaggacaaggaaatctcgatgatcgtcctcgtgacagggaggatcgagctaaagcacctaaact cccctcgtttgtggatgggaaggatgatctggacgcatacctgcagagcttcgagagatttgcggagacagctaagtgga ataatattggatgggcatcaaagctaagtgctcttttgtcgggacgagcactggaagtgtattcacgtctatccgaggaa gcagcgaaagattatgacaaagtgaagattgcgttgatgaagagatacgatctcactgaagacggctatcgtcgtaagtt tagagcatctaaacccgaagctgatgaaagcctggaacagtttattgtgcgactggacagatacctgctacggtggttag agctctcagatactgaccaaaccttaggcggtctcaaggacttaatagtgaaagaacagttttttgactcctgtcctaaa gatctggccattcacctgcgagaaagggcacctgaaactctaccaaaaattgcgaagatcgctgaccagtacttggaggc tcatggtaaacatttgttcagcccagcgagcagaaaaccaacagtacagcctgagagagacgaagccaagaatatgcaga gcaatcaaacagctctccattgctttaagtgcaacaggtcataaagtcataaagctgtcaactgcccaatcatagcaaag aggtgttttctgtgtggcaaacaaggacacgaagctaggaactgtcgtttaggcggacggagatcaggaggacaaagtac ggatggtaaccctgtgcagcgcggtcaagtgagcgccagttgtctggttcagccacctgatgttaaacctacagaagaag aagttaagtcctgtattaaagatgacaatctgctgttagcctgtggtaagaagatcccattgttgagtagtgcttgtgtt gaaccgttaactggagtgagaagtaaaatgcctgttgtgaaaggtagggttggagagaagcctgttgatgtcctgagaga tactggttgcagtggaattgtagtgaagagggaccttgtgtccgaggatcagctcaccggcgagtttaatgttatgttgc tcattgacaatacggcaaggaaagtacccatcgcaaagattgatgttgatacaccttatgtcaagggccaagtggaagcg cagtgtcttcccgatgctgtttatgacttaattattggtaatgtgccagacgctagagctgctgacgacccagacccagg ctggcgagatcatgtacaagaagcatgtgctgtaactacgagaagtcaagcaaagaaggacggtgaacgcatcccgctga agataccgagtatcaatgaaagtcctgttgtaggtagtgaaaagcttaaacaaatgcagcgtgatgacaagagtttacag aaatattgggagaaaaatgatgtagttgtgagaggccaggctgagaactcatttgaagtgaaaagtggagttttgtaccg cgtctacaagcacccttatgtgaacggaggcaaacctctgaagcaagtcgtggttcctgagcagttgagaaaccgaaaaa tggaactagctcacggatcgattatgggaggtcacatgggaataaagaaaaccgttgataagattcagagcgcattctat tggccaggtattcaaggagacgtgacttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnncgcagttcgtatctgagtgtatgaaggaagtgacgcggcttttgagcattaaatagctcactatgactccttatcat cccatgtgtaatggtctgacggaaaaatttaatggaactatgaagagcatgctaaagagactgtgcagcgagcagccaag acaatggcaccgctacatcaacccgttattgttttcgtatcgcgaagttcctcaggagtctactgagttttcgctgtttg agttgctgtacggaagagctgtcagaggaccgatgcttattctcaaagagctctggacgaaagaggttgaggaacctgag gtaaagaacagctatcagtatgtgtttgagctacgacagaaactggaagataccctcaagttggtgcacaccgagcttca gaaagcccagctcaaaggcaagcattactacgatcgcaagaccaaagttaggaagtttgcaccaggagataaagtgttag tgctgctacggaccgaccacaacaagctcctaatgcagtggaaaggtccatttgaggttagtgctgtaattggtctcaat gattataaagtgagagtcaaaggaaaagagagagtatatcatgcgaacctactgaaaaagtattttgagcgagaggattc cgttggagcagttgcttttgaagcgaactctaacatttgtaagcacgaatacgctgagagtgaaatagaagaagttgatc ctgcggagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttaccagaatcgatttaagcaagggctactgg caaatttctatacccgagggagatataacgaaaactgcttttgtgacgcctgacggatcgtacgaatttctgaagatgcc gtttggtatgatcaactccgctgcaacattaaagagagctatgaagaagctattgcatggactggacaacgttgaatttt actgggatgacattttggttcatacccgtacgtggaaagagcacatcaaggcgcttcgagagttgtttagcagattatta gcagctggaatgaccataagaccgactaaatgtctttttggcgtcaacaccattgattttcttggtcaccgtttggagga agggttaattggtcttcatgaagataacgtgacaaagattagagacgctctaagaccaactaccaagaaacaaataaaat cgttcatgggtttggctggatattacagagattttatccccaacttcgcagcattagcagccccgctgtcagatctcacg cgtaaaggccaaccgaacaaagttgaatggggcgaggcacaagagaaagcctatcagagcatcaaggctaccctaacaaa ggaaccagtccttcgactaccagatccaaggaaaacctactttctgcagactgatgcttccgacagtggtattggcgctg tattaatgcagaaatatgatggcaagttattccccgtttgctacgcaagcaagaagttgtcaagtgtggagcgtaattat tcaaccatcgagaaagagtgtttagccattgtgttgggattcaaaaggtttcatctctatttgtatggagtttcctttgt actacaaacagatcacgagccactgaagtacatgaacagtgcgaagtttgctaatggacgcctaatgcgttgggctatgt ttcttcagagttagaacttcagagttgaggctatcaaaggatctgagaatgttggagcggattacctaagcagagtagag gaataacttaagaggcattagactacctcctctcttggcatcatttaattaatttttcgttgttagtagaaatttaggaa atttcttctcgagagggggttatgttacgaaaaactgttgcgtgactcgtgaagattcgcgaatatgctaatttagtctc gagtcttcttcggttcagtaattctattttaggccgtttgcgtatgttgctacaaatagtttgttattgtaatattactt tatatagccggaaagttctagaaccttttctcgtaaagtatataagcgaatcgctgtaatatttagaagaggttttttcc aggagtgtttactcaagtgtgacagaggtcgcgtgtaaagctttgaagtgtgacagaggtcgtgtttgttcgagtgtaac agggaggttacgagaatatctaggcagaggccgtgggattatacaagagtgacggagttcaagtgcagttacaagcctag cgtgtgctgttgtggagtcttgtgtggaattattgcgttcgagtggaataaatatctttgttgttg |
Protein
Protein ID | aug_v2a.14504.t1 |
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Definition | - |
>aug_v2a.14504.t1 MEAELVRQKEAAEAAKRGHELELNRLGQGNLDDRPRDREDRAKAPKLPSFVDGKDDLDAYLQSFERFAETAKWNNIGWAS KLSALLSGRALEVYSRLSEEAAKDYDKVKIALMKRYDLTEDGYRRKFRASKPEADESLEQFIVRLDRYLLRWLELSDTDQ TLGGLKDLIVKEQFFDSCPKDLAIHLRERAPETLPKIAKIADQYLEAHAKRCFLCGKQGHEARNCRLGGRRSGGQSTDGN PVQRGQVSASCLVQPPDVKPTEEEVKSCIKDDNLLLACGKKIPLLSSACVEPLTGVRSKMPVVKGRVGEKPVDVLRDTGC SGIVVKRDLVSEDQLTGEFNVMLLIDNTARKVPIAKIDVDTPYVKGQVEAQCLPDAVYDLIIGNVPDARAADDPDPGWRD HVQEACAVTTRSQAKKDGERIPLKIPSINESPVVGSEKLKQMQRDDKSLQKYWEKNDVVVRGQAENSFEVKSGVLYRVYK HPYVNGGKPLKQVVVPEQLRNRKMELAHGSIMGGHMGIKKTVDKIQSAFYWPVPQESTEFSLFELLYGRAVRGPMLILKE LWTKEVEEPEVKNSYQYVFELRQKLEDTLKLVHTELQKAQLKGKHYYDRKTKVRKFAPGDKVLVLLRTDHNKLLMQWKGP FEVSAVIGLNDYKVRVKGKERVYHANLLKKIDLSKGYWQISIPEGDITKTAFVTPDGSYEFLKMPFGMINSAATLKRAMK KLLHGLDNVEFYWDDILVHTRTWKEHIKALRELFSRLLAAGMTIRPTKCLFGVNTIDFLGHRLEEGLIGLHEDNVTKIRD ALRPTTKKQIKSFMGLAGYYRDFIPNFAALAAPLSDLTRKGQPNKVEWGEAQEKAYQSIKATLTKEPVLRLPDPRKTYFL QTDASDSGIGAVLMQKYDGKLFPVCYASKKLSSVERNYSTIEKECLAIVLGFKRFHLYLYGVSFVLQTDHEPLKYMNSAK FANGRLMRWAMFLQS* |