Gene
Gene Model ID | aug_v2a.14536 |
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Locus | scaf6098 : 1302 ... 3995 : - |
To GenomeBrowser | scaf6098:1302..3995 |
Genes list of scaffold | scaf6098 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 52-1 |
Description | This gene model contains zf-CCHC and RVT_2 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.14536.t1 | gi|542255002|ref|XP_005463193.1| | PREDICTED: uncharacterized protein LOC102077769 [Oreochromis niloticus] | 4.0e-37 |
aug_v2a.14536.t1 | gi|698558356|ref|XP_009771264.1| | PREDICTED: uncharacterized protein LOC104221828 [Nicotiana sylvestris] | 2.0e-34 |
aug_v2a.14536.t1 | gi|747069190|ref|XP_011081378.1| | PREDICTED: uncharacterized protein LOC105164425 [Sesamum indicum] | 5.0e-33 |
aug_v2a.14536.t1 | gi|514823871|ref|XP_004986594.1| | 3.0e-32 | |
aug_v2a.14536.t1 | gi|590611570|ref|XP_007022140.1| | Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao] | 4.0e-32 |
Transcript
Transcript ID | aug_v2a.14536.t1 |
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Definition | - |
>aug_v2a.14536.t1 gcagctgcaccgctaaaatccgccagtgagacagtcagcgacagccttttgatagctatggtgttgaaaggtctacctgc ggagtacaaaacgttttcagcgatcgtgtcgatcgcagcgtgacgagaaagatgacaagatgaagtttcaagaatttaag gtcgcactaaggagttacgaggagaccgaaaaatcctgttcgctacctcaagctgaagaggacaacattatgaactgcaa gtcgaaaagcacagcggcagatggttccataacgtgctattcctgcggtcaaccgggacacaagtcatcagaatgtcgat cgaaggacaagaagaagaagaaaggaaacagatggtgtagccactgcaagtcgaaaactcacaataccgacgtttgtcgc aagaaagactcagcgaaaaccgtgagtgatgacaagtctgaaaaaagggatgcttcatttgcttttaaagtgactgtagg taattttgattcggttagagaaacctctttgctagttgacactggagccactgctcatattcttaatgacaaatctaagt ttctgaaatttgacgaagatttcaaaccggagaatcattatatagaattagcagatggtagtagggcatgtggtgttgta tctgccaaaggcagagcaaaacttatcctacatgatgtagaaggtgttgcccatgaagcttttcttgaaggtgctttgtt tatacctagctatagacagaatattttttctgtttaatcagcaatcaataagggaggtgccataaatttgacaccaaact ctgcagagctgagtgcaccagatggcacaaaatttgccataaagaaacatggcaagctgtattatctcaacagcacaatt tctagcagtggagctcacactgctgagacatggcacagaatactagggcattgcaatatgaatgatgtgttcaaactaga gggtgtagttgaagggatgaaaataacgagtaagggtaaacctgaatgtggcacttgtgtgcaaggcaaaatgtcacaat accaaaatagggaaccagatcgcgtgcaactgctcccctccaattagttcatagtgatcttgcaggcccaattagcccag tatcgaaggagggtcacaagtatgccatggtttttgtagacgacttttcaggtgcttttggggtgtatttccttaaaaac aagagtgatgccccaagggcaactgagcagtttctagctgatactgcaccctatggttctgtcaaacggttacgatctga caatgggggtgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnncgagctgagaaaggtatttttgtgggatatgacaggtctagtcctgcattccttgtgtattgccca caagcaaaaactgtcaggaaagttcgatgtgtcaagttcactgagaattttggtaatgtcgatgaaactgttgaattgtt gcctgattctgttaagccaggggaacctgaaataccaacccatgggaatgaggatgctaatgttaggcgttaccctacta gagatcatgttaggccaaaatatcttgatgactatttaacaggggaggacattgatgatgcaattgatgatactgcaaat tgtacaattgatttttgttacggattagccaatgttcctcaatcataccaagatgcgatctcatccccagaggccaataa gtggagggatgctatgagtgaagagttgaatgctctatgggataatgaaacctatgaactcacccctctaccagaaggtc gaacattagtgttgggtaagtgggtctatgccgtaaagctgggtcgtaatggggaagaaaagtataaggcacgttttgtt gcgaagggttactcccaggtcccaggtatagactaccatgaaaccttttcaccaactgcccgtatatcctcagttcggat gctaatgcaactggctgtgcaagagggtatggtagtatatcagatggatgtgaaaacagcctatttgaatgctccaattg actgtgaattgtatatggaacaacctgaaggttatgagagaaaaagccccaatg |
Protein
Protein ID | aug_v2a.14536.t1 |
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Definition | - |
>aug_v2a.14536.t1 MKFQEFKVALRSYEETEKSCSLPQAEEDNIMNCKSKSTAADGSITCYSCGQPGHKSSECRSKDKKKKKGNRWCSHCKSKT HNTDVCRKKDSAKTVSDDKSEKRDASFAFKVTVAINKGGAINLTPNSAELSAPDGTKFAIKKHGKLYYLNSTISSSGAHT AETWHRILGHCNMNDVFKLEGVVEGMKITREPEIPTHGNEDANVRRYPTRDHVRPKYLDDYLTGEDIDDAIDDTANCTID FCYGLANVPQSYQDAISSPEANKWRDAMSEELNALWDNETYELTPLPEGRTLVLGKWVYAVKLGRNGEEKYKARFVAKGY SQVPGIDYHETFSPTARISSVRMLMQLAVQEGMVVYQMDVKTAYLNAPIDCELYMEQPEGYERKSPN |