Gene
Gene Model ID | aug_v2a.14569 |
---|---|
Locus | scaf6119 : 17174 ... 18654 : + |
To GenomeBrowser | scaf6119:17174..18654 |
Genes list of scaffold | scaf6119 |
Manual annotation
Study field | Transcription Factor |
---|---|
Gene name | Adi-Hand1 |
Description | Named thus based on BLASTP results against NCBI nr and molecular phylogenetic analyses (NJ and ML). Adi-Hand1 and Adi-Hand2 are aligned tandemly in the genome. Adi-Hand1 forms single clade with Nematostella Hand (Nem6). Nematostella Hand (Nem6 and Nem21) are also aligned tandemly in its genome (see Simionato et al., 2007). |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
---|---|
predicted protein [Nematostella vectensis] | GO:0046983 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.14569.t1 | gi|156383509|ref|XP_001632876.1| | predicted protein [Nematostella vectensis] | 2.00386e-43 |
aug_v2a.14569.t1 | gi|733930327|ref|XP_010725869.1| | PREDICTED: heart- and neural crest derivatives-expressed protein 2, partial [Meleagris gallopavo] | 1.0e-31 |
aug_v2a.14569.t1 | gi|593735567|ref|XP_007113203.1| | PREDICTED: heart- and neural crest derivatives-expressed protein 2-like, partial [Physeter catodon] | 1.0e-31 |
aug_v2a.14569.t1 | gi|397506058|ref|XP_003846179.1| | PREDICTED: LOW QUALITY PROTEIN: heart- and neural crest derivatives-expressed protein 2, partial [Pan paniscus] | 1.0e-31 |
Transcript
Transcript ID | aug_v2a.14569.t1 |
---|---|
Definition | - |
>aug_v2a.14569.t1 gctaataatgttccattcgcaagttagttcccagtcaggtatcacctctacgaacgtgggttatcactttgacgcgtata tttcacagcggagacgcaagccatttcttgagcagtcagaggacaaccagtttggaagacatcagatttttcggggattt ttctcctcgttgtaggtcgtctaagaaaatggagaaagtcactgcaggcgaagcgcctcaaagactgaaatcagaaccac gcgaagatcatcaaccgagtgcttctacagaaccaagtgatgtcccgcgaggttctgcaaatcgcaaggagagaaagcga actttaaccatgaactcagcatttgctgagctcagagaccatatcccgaatgttccgccggacacaaagctttcaaagat aaaaactcttcggctggcaataagttacatcaagtttttaacggagattctggaagaaagcaacgacggtaaaccaggac ggagcaacaacaacttcgtggtcgatttggcccttcagagtgaagggagagagaaaagaaagagggaaaacttggtaagt tgattgttttatgttggtaaacttaaacagaatttacgaaacgctgacagcgttgaaagcttgggcgcaattacggcata tcgtttgtattgtctttcacagacctcatcttcgagccaagatgcttctcaaagaaagcgagggagaactgggtggccac agtatgtttgggcaatggagctgaggaactgatactccacagtgaatgtcgcaaatcttcatgtggaagtttcacgcctg atgctggcgacaaacaagacggcgacaaacaagttccgtggtgatttataacataacgccttccaactgacgcgagagtg tcctaagagaaaaaactgatgctcgtaagccctaaaattaagctttgttaaattatcgtgttagaactgtgttaatcttt aatttagggcatttaggacaaaatttccaaagaacgccattctgacaagtttgtcccgtcccattgtgtatataatgact ccatttatcacacctcggtgatagacatttgtattgtttgcgaaatatcgccaccgaatttgtcattttaaccagtcggg aaagaaatattaaatcgttcttagaaaaaaaaagaatcttggctgcaaatagtccgttcttaacccgtcgaaattttaat atcccttcgttattattttataccactttgacttccaaatattacatacttaaacgaaagttcctctttatttatttgag gtcataaaatgcttgtttaagttttcactaccaagccgtaaaacgttaaagagaccagaaaactacttatcaggggaact cagtgtatatttaggtatatttaagaaaatacgaaatatttccagctgtttcaatatctactttgtattagctagattac attcactttatagatttaattgatgttaagtgccaaatcat |
Protein
Protein ID | aug_v2a.14569.t1 |
---|---|
Definition | - |
>aug_v2a.14569.t1 MEKVTAGEAPQRLKSEPREDHQPSASTEPSDVPRGSANRKERKRTLTMNSAFAELRDHIPNVPPDTKLSKIKTLRLAISY IKFLTEILEESNDGKPGRSNNNFVVDLALQSEGREKRKRENLTSSSSQDASQRKRGRTGWPQYVWAMELRN* |