Gene
Gene Model ID | aug_v2a.14606 |
---|---|
Locus | scaf6134 : 43536 ... 49226 : + |
To GenomeBrowser | scaf6134:43536..49226 |
Genes list of scaffold | scaf6134 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 39-31 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains Glycos_transf_1, NB-ARC and NACHT domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.14606.t1 |
---|---|
Definition | - |
>aug_v2a.14606.t1 gacgtggttcttgatggcatctaacatgtgccctcctcaagaacatgatccaattcatggctccagcaaactccaagtca ccattttggcttctgagtggggatccagaaaaggagggctctccactataaacagagagttggccattgaattagccaaa ttttcttgtgttgaagttaccttctttttgcctagatgctctgatgaagaaaagaaagcagctgctagccatagtgtttc cattcttaacgcagtgagacgacctggtttccatgatgaactggactggcttagctttccgcctgagaatttgaggatgg atgtggttgttggtcatggagtgaaacttggtcgccaggcccaagttatccgcaagtatcacaaatgcaagtgggttcaa attgtacacactgacccagaggaacttggaatgttcaaatgttatgagaatccaatctcaacaggagaacaaaagcatca tattgaggttgagctatgccagatggctgattttgttgtcggcattggacccaagttgtctggagcctttcgcaagtacc ttggcttttgcaaaagacaacaagatgtttttgagtttattcctggtgtttttgattacttttctggtgttcaacaagtt cctgacgaaagcaaacaatgccgtgttttggtgttcggtcgtggagatgctgaagattttaagctgaaggggtttgacat tgcagcaagatctgttgctgccttgtctgacactattctaattttcgtgggagcatcccatgggaaacacgaggagattg ccaagcgttttatggattttgggattccagaaaaccgccttagggtgagaggttacatggagcgaaaagctttgaagcag ttattttatgaggtggatcttgtgctgatgccatcaaggacagaagggtttggtttgacaggtctagagtccttgtcggc tgggcttccagtacttgttagcaaaaactccggttttggagaagttcttgacagcataccatttggttttttatttgtca ttgactctgaagatcccagctcatggacaacagagatcaaacgtatcaggaacagaaacagaacactgcaacttgaggag attaaggttgtgcgttgtttctatggtgaaagatacagttggtctgaacagtgcaaacgccttattgaaaagatgtttaa acttgttaatggtatgaacttcattttgattctactagcttgttgattaaagaggtagtttttaagaagtgcagcataaa acaaaattcatttttctgaagtactgttttgagcatgtgggaaaaagaaaagttctgtctaagttggatcaatgttgtac agtaattattgtgcagccacatgtggttagtgcagtgtttttaaggctgtggaccagtgaccaggctcaccagaatcata atagtagtatgagtgactggcattactgagctcataggtttgatttgtacctggaaatctgagacgttttcatcagtttg atcaagaaaccatgttatcttaaccatttaaatttctggcttggatagaaacttcttctgagcgtgagatcacagcacag gcagtgggagcaaggaagctgaagctgaaagaggacttcacaggtataaaaggaaattattcaaagtttgcaacttgtag atgtagtagtatgctttatttcataagtactgagatttatccacagagatgacagtgatgaaaaaatcgttctgttttta gtcgcagccaatcagcgaatttaacaatgaaatttcacgtctgaaaaatcatcgttcgcggcgtctgattggacgaacga tgtttttcactannnnngtgaaaagtgatccttggcgcgaaaactggcaagccgcccttttattttaaaggtgccagaaa ggtttgtggacgtcgggtcagttgaaaattttatcgcagaacaagaaaacaaagccacattacaaaaatcacgagatgta aaacttttgcaaacctttttaggaaccagaaatgaacttagaaaagttgaagaaattccagcattggagttaaacgaata tcattttggtcagaaccaaagataggaaagactatgagccttcttcgctccgaagtctgttgacaagtttttgtctcatc gctgttattgtcattattgttcgaaagaaatctcagtacctatgaaataaacacattacagcatggaaaatgctttgtac gatttttattcactcgttgtttcgtaccagaaaactcgctcgttcgctgcgctcactcgttcattttctgatactactca actcgtgaataaaaatcgtacgcgcgcattttccatgaagtaatctctttattcttgctcatccaaacataagaggggaa agttaaagttaggaaataggatacctgaattacaagcctagaaagtccaataatttttttaatgatatacatgcttggta ttttttttgctgaaaacactgtaaagggaagaaggatgatttagagaaacaagatgattcatgaacagataaaatttcat attatagtgtaagtgttatatttattcaacctcccttattatggggagacttgcttgaacaaggtagttatttgcattgt actagagaaacctttgcacgggaataagtaacttatgcagttatgcaaagaagcccagctgaaaaaaaaattcaaggcta aacggggcttgagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnntatggttcattgtacaggtaaactcgcacctgtaattactggcgatcacgcttcatatgatgggtag cttaaatttcatcactccattagaatatatggttttataaactgctctctgtttttattctttgtttgtggcagctcgtg cggcgtatccaagccttgtcatagagggtatacgacaagtttaccagaagtgcgaaggggtgattttgccaattccttgg tgtgacgggttcaatttccagatagaggacattttcaccagacttaggatagttgaaaaagaaaagacacgtggagtagc gaccataagagaagtcaccaagatgacaagtatcttcacaccacacaagtgttgcaaacaaccgctgattgttttgattg aaggcgaacctggcatgggaaagaccacctattgccaaaaactggcatttgattgggcaagtaaacaatgtggcgaatgg gatgagtcttttccaagaattgatgtgctcctgctcctaagatgtcgtggaatcaaatctaccatctgggacgccattgt agaacaaattttgcaaaaggaattgaagccggaggaaagtgagatgtttttccagttcttgaaagaaaatccctccaagg tgttgcttgtgctcgatgggttagatgaagcagaccctcaaaagctggaaatgtttatgaatcttattcaaaggaagcag cttcctggctgttacattgttctcacatctcgcccagaagcggggagtaaagtaagggggtacaccgacacattgttaga gattgtgggattcacaagaactgatgcaaagtgttacataagaaagtattttcaacaagcggaacacttggcaatagcac ttatttctaaagttaagttggataaggatttaagggaactaacaaaaaatcctttaaacactcttttgctctgtgttgtc ttcgaggatttaaaaggaattctaccatccaacaggacgcagctttacgtggagattgttctctttgttttgagacgtta tgaaagcaagaacggcttatcaaatagaggtaaagatcttttattagtttacaagaaggaattgatgatcctaggagaaa ctgcgctagattctctgcgtaaacgagagctgtatttcgatgaccacaaaggggatattagggaaagtttgttgatgaag tttggctttttctcgatccagcctggtggttgcaagagagctccttgcgaccgttacggtttctttcataagagtatcca agaattcttttccggttacttccttgccttttctgtcattgataatgttactaactttcgctcagtactgactgatgaga gatacatgagcgaactatttcacgtttttaaattcatgagtggaatcgtagctctgcgatccgcgaaaactgcagtgtca attgtacaaagtattgcttcagttgttaatgagacaggcggcacacatcagggggctgataaattcttttccaccctacg ttttgctcgcgagttaattaacggatgcaaaacttgttcgggagacaaaatttcggcaaaagtagatcgtacctttggcg agagtcttgagttggttgacatagaattgaagggtctccccatctcctctctacgggacattgaagctattgagacattt ttccaggccctcacctttaactccaccgtctcaagcctgaaattgtatcactggcgatttagtattagggttacaaactt acttgctgagg |
Protein
Protein ID | aug_v2a.14606.t1 |
---|---|
Definition | - |
>aug_v2a.14606.t1 MCPPQEHDPIHGSSKLQVTILASEWGSRKGGLSTINRELAIELAKFSCVEVTFFLPRCSDEEKKAAASHSVSILNAVRRP GFHDELDWLSFPPENLRMDVVVGHGVKLGRQAQVIRKYHKCKWVQIVHTDPEELGMFKCYENPISTGEQKHHIEVELCQM ADFVVGIGPKLSGAFRKYLGFCKRQQDVFEFIPGVFDYFSGVQQVPDESKQCRVLVFGRGDAEDFKLKGFDIAARSVAAL SDTILIFVGASHGKHEEIAKRFMDFGIPENRLRVRGYMERKALKQLFYEVDLVLMPSRTEGFGLTGLESLSAGLPVLVSK NSGFGEVLDSIPFGFLFVIDSEDPSSWTTEIKRIRNRNRTLQLEEIKVVRCFYGERYSWSEQCKRLIEKMFKLVNARAAY PSLVIEGIRQVYQKCEGVILPIPWCDGFNFQIEDIFTRLRIVEKEKTRGVATIREVTKMTSIFTPHKCCKQPLIVLIEGE PGMGKTTYCQKLAFDWASKQCGEWDESFPRIDVLLLLRCRGIKSTIWDAIVEQILQKELKPEESEMFFQFLKENPSKVLL VLDGLDEADPQKLEMFMNLIQRKQLPGCYIVLTSRPEAGSKVRGYTDTLLEIVGFTRTDAKCYIRKYFQQAEHLAIALIS KVKLDKDLRELTKNPLNTLLLCVVFEDLKGILPSNRTQLYVEIVLFVLRRYESKNGLSNRGKDLLLVYKKELMILGETAL DSLRKRELYFDDHKGDIRESLLMKFGFFSIQPGGCKRAPCDRYGFFHKSIQEFFSGYFLAFSVIDNVTNFRSVLTDERYM SELFHVFKFMSGIVALRSAKTAVSIVQSIASVVNETGGTHQGADKFFSTLRFARELINGCKTCSGDKISAKVDRTFGESL ELVDIELKGLPISSLRDIEAIETFFQALTFNSTVSSLKLYHWRFSIRVTNLLAE |