Gene
Gene Model ID | aug_v2a.14827 |
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Locus | scaf6251 : 3646 ... 10665 : - |
To GenomeBrowser | scaf6251:3646..10665 |
Genes list of scaffold | scaf6251 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 39-59 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains Glycos_transf_1, NB-ARC, and NACHT domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.14827.t1 |
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Definition | - |
>aug_v2a.14827.t1 nnnnnnnncccgggggggggggggggggaataaaaaaaagtacagttttgaggtactgtatgaaagtgccctacataggg aaaaattaggcagccttggtcaaatgccctgctttctttgggtggaggggatgcaggggcttccacttactagtgcttgg gtgagtgagtgagtgagtgtaagaatgtaggcttgcatcacgtgcatgaattggagaagtagagaagcatattcttgaac atttcagaaaatgagcttcgaaagcaagaattcttttttcagtaattttccaaaccctttgtgtagtttaccacatattt gcttcaaactgataaattcctggtgttgcctcattttccatgtttacatctttgacctgatcttgtcagtatcactgctc tgctgtactgacacattaactgctgatattgatactactaccattacttcagtggttccatgcttgctaaatgatgatct agtcattcagtgcgtttcagaagacaccacagttgatcactcctattacaaggaactagagaagctatcaatcaagagcc ttacaatgactgtgcacatcattgatcaactccaatactttatgacactttttacggttaccagggccttgccttttcta tgacttgatctcctcagtataactcagagttccaagacagcaaacagtagtgacagattactttaaataaattgtctgtg agacattttaagctaaaatttttagactgctgatgcaaaaaaggcctaagaaacttgataaaaggacaaaaaggagcacc aattgggacactaagaggggaaaccagagtaaccagagaaaacctctaggtgcagaatacagaaccaacaattttagccc acatatgaggccggatgtaggaatcaagcaaggaccacattggtgggaggggagtgctctcagcactgcaccatccctgc actccctacgcccaaggatgttttgttatatggatttgttttatataatttctgtctatgctaactcctaagaacactat atatgaactacatgctctctatattagagctagaactttgcattgctttgcatggactttaaaggtccaaatacagggaa gctaatgttttgtttccagtatttttgactttatcctcacgtgtgttaaattttcaacatgcgttttgctatgtgaaggc gataaaataatgttgactgccagccatttttttccaatttatatttttcctctattaagccaccagtttcataatctgag gatggcagcttaatagaggtccaactgtagtcaattctattaattttaattttgagacgtacatgtatgtacatctttgt gattagcttagttatcaatattttaatttttaactcaagtttcttatgatgattgctaacttatgaaatgcacctcttat gatttcgtgttctgtgagagtcaacttttttaatatgtttttccactatgcagtttggatcaaaacaggagcttataaaa tgtaaaacagttgtggaggtgcatgaatgaatgggcaactattcctttctcctttatcattcattttgaggcgttttaat gattcaatgtgtctttttgcttttctttatcaaggattttcagtgcattggttggatatgctattccagattgacatggt tcgtgatggcatctaatgtgagccagcttcaagagcgtgacactagtcaaggcctcagcaaagtccaagtcaccatttta gcttctgagtggggatccagtaaaggagggctttctaccataaacagagagttggccattcaattagccaaattttcttg tttggaagtcaccttctttttgcctaaatgctctgaggcggacaagaaagcagctgctagccactgtatttccattgttg aggcagcaagacgacctggttacaatgaactggactggctcagctttcctccagggcatttgaaaatagatgtggttgtt ggtcatggagctaaacttggtcgccaagcccaagtcatccgtgagtctcataactgtaagtgggttcaagttgtacacac tgacccagaggaactaggaatgttcaaatgttatgagaatccaatctcaacaggagaagaaaagcatcatattgaggtag agctatgccagatggctgattttgttgtaggagttggacccaagctggtggaagcctttcgcaagtaccttggcttttgt aaaaagaaccaagatgtttttgagtttactcctggtgtttttgatgagtttttcggtgttcaacaagttcctgatgaaag aaaacagtgcagtgttttggtctttggtcgtggagatgctgaagattttaagctgaagggatttgacattgcagcgagag ctgttgctaccttgtctgacaccattctagttttcgtgggagcacctcatggaaaacacggggagatcgtgaagcgtttc attgattctgggattcctgcaaaccgtctgaaggtgaggggttacatggacagccgagaagatctaaagcggttattttg tgaggtggatcttgtgctgatgccgtcaaggacagaagggtttggcttgacaggtctggaagcactgtcagctgggcttc ctgtacttgttagcaaaaactctggttttggagaagctcttggaagcgtaccatgttctttatttgtcattgctgatgaa gatcccagtgcatggagagcggccatagaaagcagctggaacaaagacagaaagtcacgacttgatgaggttaaagctgt gcgaggtttctatgctgaaagatacagttggtctaaacagtgcaagcatcttattgaaaagatggttaaacttgttgatg gtatgaattacatttagattctattcgtttgttgattaaaatgttaatttgaatacttgtacagccaaaaaaaatgcatt attccagagtactgtttcatcatatggaaaaaaattctgcctaagttggatcaatgttgtgcaataattgtgcacatttg gtttattgcaatgtttgtaagactggggatggaacaataagaaagtggatatggagtgagcaagctcaccagtatcataa tgaaattatcattattatggactgactttagagagcccatggggttgatttgtgattgaaactctgaatcattttaagct tttacttcacccatgttcaaagaaccatgatatcttaaccatgtaaaatttctggcctgaataggaccttcgtctgagct tgagatcacagcacgggcagtggaagcaaggaagcggaaactgaatgaggacttcacaggtatacactggaacagttcaa agtttgcagcttataggagtcgtagtatcatactattcttcatcatccaaaattaagagagaaaagttaaagtgaaaaca ttggatgactgacttttatgccccacactgagcgagtgagcacaaatacatttataagtaccttgtaaatgtcatgcgct tgtaaattaataatgtgcgatgatctctctaatatcaaaacatttatatctgtaatatttcattaatcatactcgtcctc aaggaagtttcccaagaaaaaaaactgacagttctttctcttgacaaagacgtacagtaagagatttctggtttttggaa cttggtgcatttcatgaaacataaacgttttacaaacaaattttcagtcacataacagcatttcttgtaatttttcacag ttttactgtcatgttatgttctatgcaatatcctcttttgctataggataacacattttgtttgacattgtccgtagact attctctaagtgttccacccgaaacgaaaagaattgaaaagaatgagagtgagcatccagcaggtacagtccatgaaatg cagcaataaaattagttgtcagggaaatgataaagattatcatttcaaaggaatttttcaatttttttattatggctttg acttcttagcagagcttgataaactcaaggaattttaggaatctttggctcgcgatgtccattttgtttgtgccacccag aaagcataatctcatgcaaaaaagcttttagttgtctgttttagttgtcctatacagaatgcgcacggtcattaattgtg agtgcttctaagttcctcccctgaaagaagtatgaaaagagcaaatgccattgaccctaaaaattatataagacatgtaa gttatgaaactagggcaacttgatctattgaaaaattgaaatcgaatatataaataactgcgtctctgtgtggaggttgg acgcctgagacatcgtggagcttccactattggcagccaactccaagatggagactgcatcgatagcaggcaaactttga taacccagccatgatcccccatggcaccttgaagaaaggcacccatcatactgatacacactggaaagcagagggtgggg aagggaggggaaaaacgggctaaaagctccacacataatgctccttcctctcgccacactgataaataagcgccacaacc caaagcacgtggaatgctaccaagtataccaaaaccacaggcaataattggtcgcagtcgcagagttgtttacatggttt atcacatgcgggacaaaatgagtgattccttacttgctgagacagacggcattttttcttaatcacaagggcaattttag taagcaagagggcatgattacttgatgctgatttgttaaacgttgcttggcaacgaagcgttattgtggatgaatttttt ttgcaaaaatggcttcccgtttcgtggaagccgacggaaccttatttgacgaataataacataatgaagccgccggtaac gttgtcaactgtatcttgagaataaaatgctcatggaatccattggtcagttacgtttgttttgacatttgtggcggcat tgaaagggcttcatcgcgcggacatcgtgcgcgaacttaattccctcaaaaacgttgccccttacgtgataaacaagtaa tcacaagcgcattgggatatcaaggattcatttcacttgcattttcaaagattacatatactaaacttcgtttaacccag ttgagcactggtgttctgattggtcaaagatttatggcttcttgtccgggtaaactcggacatgtaattactggcaatca cgcgtggtatgatgagtggctaaatttgataactcaattagaatatatggctttataaattgatctctctttttattccn nnnnnnnnnnnnnnnnnnnnnnnngcagctcgtgcttcgtgtccaaaccgcattatagaggggatacgacaagtttacca gaagtgtgaaggggtgattttgccaattccttggtgtgacaaattgagcttccagatagacgacattttcaccagactta agatagttgaaaaagaaaagacacgcggaataacaaccacaagggaagtcactaacatgacaggtatcttcacaccacac aagggtagtaaacaaccgctgactgtgttgattgaaggcgaacctggtataggaaagaccacctattgccaaaaactggt atttgattgggcaagcaaacaatgtcatgaatgggatgatacgtttccaagaattgatgtgctcctgttcctcagatgtc gtggaatcaaatctaccatctgggaggccattgaagaccaaattctgccagatgaaattgagccagaggaaaaagagatg tttttccaattcttgaaagaaaatccctccaaggtgttgcttgtgctcgatgggctagatgaagcagacccacagaaact ggaaatgtacttgaaacttgttcaaaagaagcagcttcctggctgttacattgttctcacgtctcgcgaagaagcggaga gtaaagtgaggccgtacaccgacactttgttagagattgtgggattcacaatcggtgatgctgagggtttcataagaaag tattttcaagacgcgaaacacttggcagaaagacttatttcaaaagttcataattttgattttgtttttgacgaggacga ggacgaggacaaggatgaggatgaggatgagaatgaggacaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgagcatacggatttatg ggaactattaaaaaaccctttaaacactcttctgctctgtgttatcttcgaggatttagagggaactctaccaaccaaca gaacgcagctttacgtggagattgttctctttattttgagacgttatgaaagcaagaacggcttatcaaatagaggtaaa gaccttctattagtttacaagagggaactgatgattctaggagaaagtgcgttagactctctgtgtaaacaagagctgca tttcgatgacctcaaaggggacatcaagaaaagtttgttgatgaagtttggctttctctcgatccagtctggtggtagca agagagctccttgcgaccgttacgggttttttcataagagttttcaagaattcttttcgggttacttccttgcttttgct gccattgataatgttactaactcacactcagtactgaccgatgagagatacgtgaaagaactatctcatgttcttaaatt catgagtggaatcgtagctcagcgatcgaaagaaacagcagtgtcaattgtagaaagtattgcctcaattgtaaatgaga caggcctcatatcccctaatgtcgattttttatttcgtgttgcgaacatcttaattgaggaatgcaaaacttgttcaaga gacctttacacagaagtagttcgtacccttggggagaggcttcagtgggttgacgtggaa |
Protein
Protein ID | aug_v2a.14827.t1 |
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Definition | - |
>aug_v2a.14827.t1 MASNVSQLQERDTSQGLSKVQVTILASEWGSSKGGLSTINRELAIQLAKFSCLEVTFFLPKCSEADKKAAASHCISIVEA ARRPGYNELDWLSFPPGHLKIDVVVGHGAKLGRQAQVIRESHNCKWVQVVHTDPEELGMFKCYENPISTGEEKHHIEVEL CQMADFVVGVGPKLVEAFRKYLGFCKKNQDVFEFTPGVFDEFFGVQQVPDERKQCSVLVFGRGDAEDFKLKGFDIAARAV ATLSDTILVFVGAPHGKHGEIVKRFIDSGIPANRLKVRGYMDSREDLKRLFCEVDLVLMPSRTEGFGLTGLEALSAGLPV LVSKNSGFGEALGSVPCSLFVIADEDPSAWRAAIESSWNKDRKSRLDEVKAVRGFYAERYSWSKQCKHLIEKMVKLVDGP SSELEITARAVEARKRKLNEDFTDYSLSVPPETKRIEKNESEHPAARASCPNRIIEGIRQVYQKCEGVILPIPWCDKLSF QIDDIFTRLKIVEKEKTRGITTTREVTNMTGIFTPHKGSKQPLTVLIEGEPGIGKTTYCQKLVFDWASKQCHEWDDTFPR IDVLLFLRCRGIKSTIWEAIEDQILPDEIEPEEKEMFFQFLKENPSKVLLVLDGLDEADPQKLEMYLKLVQKKQLPGCYI VLTSREEAESKVRPYTDTLLEIVGFTIGDAEGFIRKYFQDAKHLAERLISKVHNFDFVFDEDEDEDKDEDEDENEDXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHTDLWELLKNPLNTLLLCVIFE DLEGTLPTNRTQLYVEIVLFILRRYESKNGLSNRGKDLLLVYKRELMILGESALDSLCKQELHFDDLKGDIKKSLLMKFG FLSIQSGGSKRAPCDRYGFFHKSFQEFFSGYFLAFAAIDNVTNSHSVLTDERYVKELSHVLKFMSGIVAQRSKETAVSIV ESIASIVNETGLISPNVDFLFRVANILIEECKTCSRDLYTEVVRTLGERLQWVDVE |