Gene
Gene Model ID | aug_v2a.15176 |
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Locus | scaf6409 : 8726 ... 17242 : + |
To GenomeBrowser | scaf6409:8726..17242 |
Genes list of scaffold | scaf6409 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 53-13 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 53-1. This gene model contains BTB, BACK, Kelch_1, and Kelch_2 domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.15176.t1 |
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Definition | - |
>aug_v2a.15176.t1 tcgcattgtacttgctgcaaatagcgattatttccacgccatgtttgcaaacggaatgaaggagtctaaccaggaagtga ttgagctcaaagataaaaacatttctaacagtgcttttaagatagtgatggattctatgtacagtggagagatcaatgtg aatgatgaaactgttttcgaagttttgcttgccgcagatcatcttcaagtttcaagtgttgtgcaacagtgctgtgaata ccttatccagctgaattttgacgtgcagacattctgccgcgtcatcacgagtgccgatcgacacggcttgaaggacttga aagaagttatggaaagtaaaatggctttaatgtacaaggaaatttgtgagaaggaagagttttgctctgatatgaatgcc gatgtattatcagctcttctatgtcgagatgacctcagcgctccatcggagaacttcgtcttcaaatcagtgatacagtg gatcaagtacaggaaggaagaaaggatggatgtggcaggtaaagttattggagctgttcgtttgggactggtagacatct ctgttgtgatcgaggaactcgatactgaggaaatgcaggtgatccctgaagtaaacatgttgttgcaaagaacattaata tacaaccagaagccttcaagcagttccgcgttcgcaatggaaaaagggaaaccaagatcaatgagttcggtaggagagaa agtcnnnnnnnnnnnnnnnnnnnnnctttgcacgagaacctagttagtgtaagaagtttaattagttttcctaaggtccg gttcaagcgtcgcaattcacatgtgccgaatcgagaatgatctgcatgagaaaatgcgacgtttgaatcagtgtaaatta aattcgacttctgccgcatcttcgagttattcgaatattcgagtgacgttcgacactggtttcaaacgttgcatttcacg cgtgccgaagaaaggcataattttttgacaacataggacaagcagttcttaccagttgttttgtagtcagtcgtttcgta tccaggacattcgtacccaaactcagatgattcgtacccaagtaactggttgtttcgtacccattttgtttacatcttca tcaactgaaacagcgtttcactgtttcacttgtatttgcagaacactgaattccgcagaggaaaaaatcgcgttgatcgc gttatacactttggcaacaaattattacatgaaaatctgtaaactcagtaccatactgtacctttgataaagaggtattt tacaaaggttgtatactgtgtgcagatgatccggagactcaggacacaagaaaaatctcaaaacacttaaaacatgaaag aatgagggttatgtaaaccagccattatttacaggaatggctccaacctttaagnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgataaccactctctacctttaatgcactacaggccagtaatat gtaccccttcagaagtttaaagaactcttcatagccatacaaacccatacataaccctacatagccacgcataatgctac attgacatgcccaaccttacctagcactagatagccatacataaccttacatacacatgtacagcgctacatatccctac acacccgtacacaaccctacatagtcatatgtaagcctacatacccatgcatagccttacatagccatacctaacattgc atagttatacattttaagcgctacctaactctacacgcccatacataaccctacatagccatacacaacagtacataacc ttacttacccatacctagtgattcatagccatgcacagcccttaataaccctacatagccatacacaacagtacataacc ctacacacccatgcataaccctgcatacgcatacttagcgatacatagccatacacagtcttacatttcgaaattcaaaa aacatttgtgggactgaagttagccacgcaatttggtagaaaaacctctatcagaaatcaaatacacaaggaggggctca gtgcttaaaggaaataacaaaacaccataatcaagaaagctatgatcctcgcagttatcacttcacaaaacacaaaaata tattttgccttttgtgacacaataccagccatcagtgtccaacttaaaagaagccttactcacaaagtgacatttacttc aaaatcaatccctactctgccaaatttaaaagaaccatctatcatttcgtacaaaaaaggaaaatcctcaaaagatctgc ttgtgagagcaaaactatgaaagattctatacatgtttcacacaggaagggaatcagtgtggcctgtcactccttgtgtt tcttatccttatgtacggctatgtattgttatgtacgggattgtagggttgtgcagcattatgtagggctgtgtagggtt atgtatggacatgaagggttatgtatggctatgtattgttatgtatgggaatgtaggattacactgtatgtagcattatg tatggctatttaacgaaattattattccatgagcgcacgttggatatgagatgataaatagccaacgaggggcgtagcgc cgagttggctataaccagtctcatatccaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataataatagtatattttaccctc aaaactggttaggactgataagacccataggtattataatagctagtatgccaagctagactctcacttcatggcaaaaa atcatgtttcaccaaatcaaatgttggtccttgattttatttaagtctacctttacaaaagcaaaaatgacagagtgatg aaattcgtcatgatgctcaagcatgtgtgcaggggaattgaggttacaagtaatgttaaaggtctgcctgaaaaaaaaaa gtaatatttgaaacaaaatttcaaatgattctttagtacatagagaagaatcattgtaaataagaaatacaatttcttaa aagcttaatttgaaaaggcacttaatctccaaatgttcaaattcctcatttcacttatgcaacagcccactgcctttcct tgagatactgaaatttgttaaatgtaaagggagagggggaaatagagtgaggattaacagtgatagctgcatttatcaca ttgttggggcnnnnnnnnnnnnnnnnnnnnnnnnctacatcattggataatgcaattcaagactttttattggcttggcc attatggtatatcagccaatataccataatctacaaatatggtaagtgtacgcgtcagtttaaatttaaaattacgcgtc agcttaaaattaaaagggagccaaaaaatggtaaggttagccattatggtatatgagccaatataaaataacaaagtcga gaagatttgtctaatatgttgggaagttttgttggatatgagatgattaaagccaactcggcgctacgcgcctcgttggc tatctatcatctcatatccaacgggcggtcgggnnnnnnnnnnnnnnnnnnnnnnngtggtcacccttggaaactgatta ggactgattaggcctctaggtggtatatagtatacaactatcccccgaaggcgaggtgaatagtggtggatatatatcca ccgctcttcactaatcctgagggggatagttgttttagtatttaccaaatcagatggataaaaaaatgccgcttcattaa tggctacaatttcttcttctgaaactttcgcgaaacgacgcgccagtgaatatccaaggataatccaagttacgggagcc aatcaaaacgcgcgaaaattgctatccactgatttggtaaataataatagatattatgccaagccaggcannnnnnnnnn nnnnnnnnnnnnnnngttggtcacatgatttgaggggaaaatgagagaaccagggggaaaaattgcgtatgtgtcggatt aaggcgaatgctctcacactgagccaaaacaacctacctctcaccaccatggtccagccttggcataaagagctactaga gttgaatttataatgctatgttgaccatcatttttcaggtacttgttgccattcatcccaagagcgacatctgttatttt gacatcgagtccaagacatggaaacagttgtcatcaatgcaacaactaagtgaggccaaagaatgttattgtgcggagct tattggtaataatttgtatgttgcagccaaaggctttcgtggtgttgttatttattgttatgacacagttcgtaacattt ggagcacacttccaattcctggcttgtcagataatcaaattgactgcttatgccatgttaaagaacatctctatgtcatg tacaaaaattcttctgcacctcacaggtataacatagctacaaatcaatgggaatctgtggctggctggaaagctgtttg tgacctgaagggtcaagaaatatttcttctcgtagaagctgctgtacagtacaaatcttgcctctatgtgttgtatgctc aaggaattcgggagtccctaaagatctatcctctaggaactgatgaggccatagtctgtggcaaaaaatgtaggccatgt aactctgttctattttgttttgatccgaagaataatgtttgggaacagaaagcgtcaaccaaaactccacattttgggtc cagtctgttagtagtaaacaaaaacctctatgttgctggggggcgttgctcattccatttatcatcgaataaacctgatg gcagtccagctgccattgaagtttacaatgaccaagaaaatgcttggtctgttgtaccacaaacatgcattccaccaaac aatctcggtgctgaagaaattgaagggaaggtatatttcatcatcaactctttcccagttgacagcggtattacgacccc accaggggaggtctaccctgctgttttgaatgactggaaaaatttaggaaatgttgacaaaaatgtagttttgtgctctg ttcctgtaaaaacagagaatcttgaaaaaaaaaaaaacaatgctcagggcgagctgaaaagttgaggcatcaatgagtac tctgatggcatcaaattttaaatgccttaggtttttgtgtttaccttttttctttattactatggtaatgtatgtttact gtactaattttaaaaagtaagtaaatccttatttatacgttattcgggtgtacttcgttgttatctcgatctcggtcaca cttgaataaattcaacgtctgtcacaccactcagctcgtgaaaaactattcattttgtactaaagttacacaaatcgact taacggcataacgtgacattctagaacgtttgggctaacctgaatataaaagcattacaacattcaaactttttgtaggg tcttgcgcaaacttgagaaagccacgaatctgctctaatggaatattcaaaagatccctagacagaaacacaaaagttct agagtgtcacgcgtgccacataattttttgtaacactcattaaattctaaaattttaaattctattagtatactagattt agttgtccgtgaaatccatgactattgtatagaacataagatgaaactaaatccaaatagagaaatgtacataaatttta tgacgaattcggttacttcattgcgaccgatatgtgttggatataaagaggtagaacgcgttggaacgtataagcttcta ggagtgataattagcgacgatcgaacgcaaatgttgaatatgcaattgctgaagcagcaaagagattatttgcacttagg ttactgaaacgcgcaggtgtaatgccaaaagacatacttaaagtatgcctttgtaatgttaggtatgctgcgcaggtatg gcagtttttccctgcatacttgtctgactctattgaatctatacaaagaagagctttgataataatatttcctaactcta gttatcaacaagcactagacctaactaatctgtcaacattagcaaatcgtaggatactcttgtgtaaaaagttgaaggct gatatgagagatgggagccaccccatatccttcctggctcccaaagtcacaacacgaactatgccacatcaattaagatc aggaagcactacagctccaaaaaatatgaaaaggacaaagagagcaaatgacttgtttagatttagattcgcatgaatgt ggactaattagtatcatttttattgtagttagacttagtttgtaaacattaattgtgatctacactgttaattcagtttt taactgccagaagtgttaataaactatnnnnnnnnnn |
Protein
Protein ID | aug_v2a.15176.t1 |
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Definition | - |
>aug_v2a.15176.t1 MFANGMKESNQEVIELKDKNISNSAFKIVMDSMYSGEINVNDETVFEVLLAADHLQVSSVVQQCCEYLIQLNFDVQTFCR VITSADRHGLKDLKEVMESKMALMYKEICEKEEFCSDMNADVLSALLCRDDLSAPSENFVFKSVIQWIKYRKEERMDVAG KVIGAVRLGLVDISVVIEELDTEEMQVIPEVNMLLQRTLIYNQKPSSSSAFAMEKGKPRSMSSVLVAIHPKSDICYFDIE SKTWKQLSSMQQLSEAKECYCAELIGNNLYVAAKGFRGVVIYCYDTVRNIWSTLPIPGLSDNQIDCLCHVKEHLYVMYKN SSAPHRYNIATNQWESVAGWKAVCDLKGQEIFLLVEAAVQYKSCLYVLYAQGIRESLKIYPLGTDEAIVCGKKCRPCNSV LFCFDPKNNVWEQKASTKTPHFGSSLLVVNKNLYVAGGRCSFHLSSNKPDGSPAAIEVYNDQENAWSVVPQTCIPPNNLG AEEIEGKVYFIINSFPVDSGITTPPGEVYPAVLNDWKNLGNVDKNVVLCSVPVKTENLEKKKNNAQGELKS* |