Gene
Gene Model ID | aug_v2a.15278 |
---|---|
Locus | scaf6468 : 13456 ... 22907 : + |
To GenomeBrowser | scaf6468:13456..22907 |
Genes list of scaffold | scaf6468 |
Manual annotation
Study field | Transcription Factor |
---|---|
Gene name | Adi-MITF |
Description | Named thus based on a BLASTP result against NCBI nr and molecular phylogenetic analyses (NJ and ML). |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.15278.t1 | gi|156393718|ref|XP_001636474.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.15278.t1 | gi|154147684|ref|NP_001093747.1| | microphthalmia-associated transcription factor [Xenopus (Silurana) tropicalis] | 0.0 |
aug_v2a.15278.t1 | gi|288557244|ref|NP_001165646.1| | microphthalmia-associated transcription factor [Xenopus laevis] | 0.0 |
aug_v2a.15278.t1 | gi|701370880|ref|XP_009963053.1| | PREDICTED: microphthalmia-associated transcription factor isoform X3 [Tyto alba] | 0.0 |
aug_v2a.15278.t1 | gi|556975178|ref|XP_005995278.1| | PREDICTED: microphthalmia-associated transcription factor isoform X1 [Latimeria chalumnae] | 0.0 |
Transcript
Transcript ID | aug_v2a.15278.t1 |
---|---|
Definition | - |
>aug_v2a.15278.t1 tttcttgttgccttcggtggcgaaaccttggctttctctactcgtttcaattaaggcattcaaatgagtgaatctggagt ggatctcgactttgatcttcttagtccagacggctacgaatcgcaagaagagacagaaatcttctacacgttgcagtcaa gatccttggatcgacggaggtaagacaagtcttagtcgaataatcccacaaatcaatcctttccttttccataagtatcc ctttttgaggttgatgttctctatgttatgaatctaaatggctttgcgtcattgaaactgaaatctataagagcttcata catctgatttataattatcttctgcggcgaacgtgtcatccattcccgtctccgcgaagtttcgcagaaaagcttatata acaagaaaatgcaaggctccagaggttttcaagtattatcatttgcacgatcaacgcgttcttaaatgccgcagaaaatt tcctttgcttttgggaaagattttccgcaccgcgcaatatattaatggtgtgtatttcagcgtttgctcttctgcatttt tggggccgacccctattgacatcttacacttgtgtggttggaatttatttgaacttgtccaggcggactgttctcggaga aaacatgttaatatttgtatgtacaagattgtcttcccccttttctgtacagtaactagcaactgtcaatgttcattcga aaacaccactaagatttattttcatcgacgttgtttttcgtgagatttaaggtgtttgttttctcacgatcttatgtgtt ttcactggttcgcctaagttcaaacctattcttagtttatggataaaaattttcggttttatttaagcatccatggtttt actttcaatacaaccttgattgaattgcttttaaggtttattaaaccgagtaaattggctacatatatttttttggaaca tgtttattgcacgcctactgcactacaatattttaaagggttttttccccgaacgttttcagtttctcatttcacaaaag cttctcgattttcgtaggatctgtgacgcaaatcactttttgtttaccattatgtaagagttgtgctgttaatcgatggt gcacgtggatagatgcgaaaaatataattgcgtactgttttgttcttgtctttaatcatccgttaagtacataagaaaat gcatgtgactttcatgaattacggtgtgtattgtccatctggtatagtgtctggttttcagttgttttaccagacttcaa agaactcgggttaatttgtttgccagaaaaatgtttttcttgtatttgcgtacttgatagaattacatcaataaatagtt cgcttactttttctttcttacccttttgaaagtaaaaatttgttttcaaatatttttcttagttttctcaggttaatgaa gttgcaaaatttagctttcctgtctgcaccagagctatcaaaaagccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcccaatttaaagtctgtcactttccttgaatctgatgat atagtggtaacaatatcctcctagatttttactattatatgttccatttcctgttgatcttctttaagaggctttcatat tacccacccatctttgaatgcccttttatggaacacaaaccttgcgttactgtgcaggaagtagttgagtgcatgttaag tgagtgattggggtaacctttatacctgggtagtgttttcaattgtgagctcatcatttctatttttaactcactgtgtt atagatttattaaagaaacatgttcacatgtcctgattttatatcctataatacaacaacaaactcaggtgataagcatc aaacccatagatttgagcaagccactcttcctttgccaagcagcagtggtgtattttctctgcaacaattgcatcactga gccaacataccatgcctacagactacgctcctccaacttattcaagttattttgatcacataaagcatccgctcaaatgg atactaacttactccaattcttgcaaacccagtgcagacccaccgttgatttgcccgcctgtagaacgcagagagcccat caaaacaatgtccactcctatcacaaggaccaattttaagcagcaacttcaacggcaacagctccagcagcaagagttgc agtcgtaccaaactcagaaacaaggcacaaatgaggtgctgcagtctcaaggcattgctgttcccagaacttcatctcct accaccgttcccccggacgtcccatcaagtgttcttcaggtacgcccgtttttcgaattctctattttgtctttgcatac tgcaaacaggtaaattttgatctaggtgaaatgttgataactaaagtagttttttgtagcaacaaattccttttcaaatc atgtgatgttgatctatataagatggaagagtcgtaaaaagacaaaaacagatctcctcgatttaggtcttattctttgt ggtttgtttgaaagctctttttactttgaacaaacaatttgctattaactgtatgtgtcaaggtgtcaaacaaaacttgt ctaaatatggtttctgtcatttgagtgtgcttgaaaaaaaatgctcttgctttgagcacattgtgactattacagaatac agggaatgtctgatcttatttttttcaaggattctacattccatgatatgtaatgttttgaagtgatttgatgttctgtg cttggtgtccttggagaaaaagagatgtgccctaacaaataaggaaggattaagttttgaacatgtgggataggataaac tcatgaaaattattggcaattaagaggaacgtgcagatgtaatagtccaaagacaaactgtcaattatttcaagtattat tttacttgatgaatataggtttgacctttttggtctcctaggtatctattaccacaaagtttaggtttagattacagaaa gtgatccttttttccttctttggtcaaatgagtacatcaaaaatagaaggttaatctttgtggagggcaggcctttaggt atataattcaagcttcactcttaaagactcatagatcaggaagccaataggctagtgatatttctagactccacaacatt tttatttattgtagttcaggttatttaagctgaacgttatcagagtaaaatggtaggtgggagtgcatatattgtggtga agtgggtagccttgatttcctgtgttgaagagatgttgcatttccgtttcataggtgaagacacaacttgaaaatcccac ccgctacttcattgcacaaaaacagaaaaggcaactgaaggagtatcttaaaacacaaggatcccctactgcaagtgact tagcagcagtggttagcagtgctagtcaacccacgttaaatgctatcaatcaacaagcagttgcggccttggcatccggt catctgatgaggcaacctgagagccccatggcagtcatgagtcccgaagggaataacgcctcagaggtgagtggttcatt ttgcctaatccctctctttatattgtttttttttaaatcagagttcattttccccggagacatcttataaatttgattgt cattttgttggcatatgagttaattaaatcaacaggaagaaatactagtactgataagcagggttgtgagagtccttcct ttttaatagttgttttggtgttataagccacttattggaataggatttttgtcacattctccttttcttgacggaggtta ttgtgtctctcttgctaaaatgttttattttttatgtttaataattacaggtggataatttactagacgatataatcagg tgtgtactaagagcaagttcctgtttttgtctgtcagaagcagtatatgatttatttgaacttattgaagcatggttgag ctttcccaatagaaatgaatataaatgaattgtaactaaaactagatgtcttgactggaaatgaaagattcccttcagtt agtgatggtgaaagagagaataattactcgaggacaaatgcgatttgaatcaaggattttggattcatgttctttttgga aggtcaagccattagagatttagtttgagtaacacaacttcctttgaaattttggttgatcggcatgctaaaaatgtaaa catgtagtgacaaatggccatggtcaggaagcaatcagctgatagtcatattgctctaggatatgtgttggtcatttcaa aatcatatgatgatttcttgtagtacttttgaagcttaaccagtggtcttttgttcactttcaaccaaacttctccaaag tgtaatcgaatgttcttggtatctctcaccagccttgagtcaaatacagtagatgacggtcttccctgggatgcttcttt aagtcttggctcggtaagttaaagagttgttgtcactatgtcatcattgtagtaaactgtctatattgggaaaacaggct cttgtttctcaatttgattgaccaagttgtctgttaatgaaagcatgtcttttgatgaattcacattcagcattcaaatt attgatatatttttgagaggaactttgagtctgctgacacaagaaactatattaggatcattccttttatatttagtgta attttaataaaatttatagataagaatctttctaaattttaacttaagtgtaagagtgctgaatataagtaatcttctca ctctaaattagattctcttttttaaacttaattttaaactttcttttttggttttataattgtttttcttttggctttat tattggttgcttgctgtcaaagtttgaatataagcaaacactgtcattcactattgggtggagtacaaatgcaatttgtt cctggaattaaaattttgtgaacaatgcatgcagtacttcattaaagtaatttttgctaaaaaaaaatctaaaattaaag gagcaaatttcttgtttgaaattccaaggacttatcccagttttgcatgtttacctgggaattgtttgattgcgttattg ttaaggttgaatggtctagctaattattgttaaaaactgtttttaaggaattcctaaaaagcatctgtagcattctggtg aaatgccttaacaactttcccaactttttagtagttgagtgaagtatgatgtgcaatttttgtaagtttaagtacaaaag ttgatccacaagaagccttcttctcaacatttgatcatgaatgagagtgtgaatttacaaataaggtcccttgcgtgttt actttacctttgaaacatcttctcacataatttattttgcctttgccaaaaatgcttagagatttgacacacctaaatat tggtttcaagtaaatcacagattagactatagctgttaagatataacccctttgctaaccagcaaattgtgatgtaggaa aatttcagttcataaatggaaaaacaagaacttccaaaaatttctaaaaacatttcttcatactaataatcatttgacgc aacttcctaaaagttctggacattagaccgttaaaatcatagcacatgttataagcgtgatagtacatgcacgattgctt atgtattattgtcttgtgactccacttgacacttcttgttgaaaatccttgaaaacttttgtgaggtttttgttatcagt aaaaaataagttgaaggtgtcttggtcgcacattaaagtaggattaacttttgctggtcttaaagaagttttttttccgt ttaattttttatgtacatgcatatatgtgaattcaagggctgaaaatgagatagggtcagcgataatatgtgctgtcatg ccagagtttgtctgatcaatgaactctttcttgtaggttccacctgttaccaataacaacatgtttgatatttacaatgg cgctcttggtatggcacccttggtaagagctatgattgttgtctttttctgagtgaaaattgctattattattttcacat tgtgtagttcgtttcatttctgaaaatacaacttggtaaatgaaatgtgtcatttaaagtgttaattatgttggacaagt ttaaactgaagttgtgcccgacaggatcatgtgataatcatgtttttcaaactaggctgtacttttagaagggactggaa aatggcatgcttcagtatagattttgtcctgaacgtgccttttcaaaacttaataacgtatgcggcccccttctggaaat agtcaataaatcatagattgaaaaaaatatgaatacccagtggaattcctttttatttatgtttatcatgataatgagtc aaaatagtttttaatcggtttaattcgtatgctttgtgccattacctgtgcaaatttatgacagaaaacctggcttcttc tcttttagcagctccatgcacctccaccttcatcaagttgccctgctgtcataaaacaagaaccacaaggttagtggaca atacaaaaagtaatatgaatcatggttacatgaaaatgcgataaacctttaatagttgaattatacattacagagaaaat gaatatcaaaccaaaatagataaacagctgctgtgagatagaggaaccggagtgaaaacttaagctttagcttaaacctt ccctcactaacataaacgaaatttttttttcattttcagaattattgatggacccgcaatttgccaaagacagacagaag aaagataaccataatatgagtaagtgaaatcacggttctgttgttttccgttacggaatcgaaagttagaagcatcttgt acaacgtattccacagcaccatgggaatgtactgctcagtagttcagctgtcctgggaatatttgtcacacttaaggatt tcatccacagagacaaatttattagcatttttgtcaactcaaaacacagggagcttttatttaattcaggcatacgttcc gggttgcattgaatttatttaattttacttcctttcagttgaaagacgaagaagatttaacattaatgacagaataaagg aattgggaacactccttccacgccaagattcgtaagtcgtgtttcctttgtttttaacttggttttgtgccttaagttta attctaggtcgtgtttgttgtgttggcaactttaaacaactggctaagtgtctgatatagttttaattgctttctttaga gacgtgcgccaaaacaagggaacaatattaaaggcatcggtagattacattagaaagttgaagcgagagcaagagcgcat caggcaactcgaggaggacaaaagaagcacagaggatcttaatcgaaaacttttactacgagttcaggttagtttgaggc gaaattttgcgcatgggttatttgtgtcggactattaagtctccagaccgttacttatgccaatcacagctatcatttga gaagtgagccaatcaaagcgcgagaaagcgtggagcgaaaaaaatgcaccgaacaattgaaatttgattgaatgacaatt ttgttttgtcgagggggggagggaaagagaatttccagccaatgatgtaactgaattcatcgtaggttgccgacagcggt actaagcgcgggaaagcgctagtgagcacagtcggcatgtgatttttctcaagtctctgattggctgaggacttagcggc aactattgcccaatcaatttcgtcacaaaggcgggaaccagcgaaaagctgtcaattggcgcgggaaaacgcgagtgagg aagcatatatatttggcttccttttacctgctacaggaaaaaaataaggtgtgaggcaaccataatttaaaatgacatgt cttcttgtctaatcctaggagcttgaaatgcatgctcgcgcacatggaatccctacaacaccgttgacatcagacacaag cacagcactgttgtcaacgattctctcagcgaaacaagcggcgaacgaccacgttaaagtcaaacaggagcttgcacaaa gcagtaggtgtgcagcagcgaaaggcagccaagaaagtcaggagcctatggaggactattcactaccgtcatcaagtaat cctagtccacgctccaacatggacgatgagatgaccgattaagtagaaattgctgttttcaaatctcggcatatatctct cgttgaggatcctagggcacgatattgagttggctccaggtattgaacctgcttgtgaatcttgacagagcgctaaagga cacatgcttttgggtgctggattttattgagctaaggaaaaaaaaaaagagcgcactacatttaacaaggttgaaagtgt tgtttgtgggacacaagattctgcttcctcatggtgcttacgagacgaacattctaagcgataaacgcttcgacgcaaag cagtgtgaaaatggcgggttatgttgacgtatttatgggtattaaactcctgttcctcgttgtggtattctcttcatgtg actaatgatctgctcttcatgtcgcactcggcaaggaaggtcattttccccttcaaaatggacattgtttttatccaagg cagtaaagccgctcgcgacaattggtgtgtgcgtacgtaaacgcgttcaactgatcatgacatcgttaatgacgtcgttg tggcacgtgacatttacgttccttacgccgtacatgcagcacgatttcttcccctccaatttattttcatttcgcttgga aaagcaaaatctccgaaataagtttcttatttcaaggcaagtcgtccgaaaataaggaaactttttcaggagtttgaaaa atcgtagggggaaaattaggaaattttacaagtgaaccgatagacagttttgtatttaaagaaagcaagataatttaaca ttggtgaattttttaaagacacgcgctcaaggcttgttcttaccaaatggggcttcaaaaacgattcagctgttttatag ctgagagttcaaaattaaatttataaaataggtattttaagaaacatttgtattttcattggaaatcaaaccaggacaat agaaatcgactcttagttcatgtgtgacgcgagcctaatcttatttacgcatccgtgattttaggtaatgtcaataaaca atttgaatattt |
Protein
Protein ID | aug_v2a.15278.t1 |
---|---|
Definition | - |
>aug_v2a.15278.t1 MSESGVDLDFDLLSPDGYESQEETEIFYTLQSRSLDRRSADPPLICPPVERREPIKTMSTPITRTNFKQQLQRQQLQQQE LQSYQTQKQGTNEVLQSQGIAVPRTSSPTTVPPDVPSSVLQVKTQLENPTRYFIAQKQKRQLKEYLKTQGSPTASDLAAV VSSASQPTLNAINQQAVAALASGHLMRQPESPMAVMSPEGNNASEVDNLLDDIISLESNTVDDGLPWDASLSLGSVPPVT NNNMFDIYNGALGMAPLQLHAPPPSSSCPAVIKQEPQELLMDPQFAKDRQKKDNHNMIERRRRFNINDRIKELGTLLPRQ DSDVRQNKGTILKASVDYIRKLKREQERIRQLEEDKRSTEDLNRKLLLRVQELEMHARAHGIPTTPLTSDTSTALLSTIL SAKQAANDHVKVKQELAQSSRCAAAKGSQESQEPMEDYSLPSSSNPSPRSNMDDEMTD* |