Gene
Gene Model ID | aug_v2a.15817 |
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Locus | scaf7038 : 23688 ... 27785 : - |
To GenomeBrowser | scaf7038:23688..27785 |
Genes list of scaffold | scaf7038 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-ropporin |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See human ropporin (AAI32747). This protein is a component of outer dense fiber and/or fibrous sheath in mammalian sperm. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.15817.t1 | gi|156399712|ref|XP_001638645.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.15817.t1 | gi|221129017|ref|XP_002165717.1| | 0.0 | |
aug_v2a.15817.t1 | gi|676492723|ref|XP_009066013.1| | hypothetical protein LOTGIDRAFT_204839 [Lottia gigantea] | 0.0 |
aug_v2a.15817.t1 | gi|260792597|ref|XP_002591301.1| | hypothetical protein BRAFLDRAFT_279482 [Branchiostoma floridae] | 0.0 |
aug_v2a.15817.t1 | gi|115908504|ref|XP_793854.2| | PREDICTED: ropporin-1-like protein [Strongylocentrotus purpuratus] | 0.0 |
Transcript
Transcript ID | aug_v2a.15817.t1 |
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Definition | - |
>aug_v2a.15817.t1 catcaacgtttttcatgtttcagtgccctttagaagctcatcagaaaaccaaggtgcatgaggccttaaagttgtagaac actctttgattggggagtgaaaaacaaactaaagaatgaatttgataagtaatcttcgaacaaaagagtaataattattg gctgaaattatctaatcattaggtactttgatgcactctcaaaaggagagacacctccagtaaaagaccgtcttgaattt cagctgggacagcctttggaaaaacccctgacgcaaggattgctttcagttttacacaaacaggtaaacttttcttaaat gaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnggtagtaccctaaccctattgtaagggcgtttgaagttggcccaatgtctttcccatgaaagac atggatttcaccctgaataaatgcgaatttcgggatgctgttaaactgcattatgattggccaatccctgaatgtccatc tatttatgtgtgcggcaccaacttctctgtagaccacgccatggtgtgcaagtgtggaggatttgtgatccaatggcaca acgaactacatgatttagaggcagagttattggagatggtatgctgagacgtgcaaatcgaacccagtctacagcctgtt accggagagaagctcaatagaggagcaaacaaagaaagtggagcaagactagattttcatgtgaggggtttctggaaaga cagagatccacctttttttatgtataagggtatgttcacccaaacgcggacttccacagagagatgatcccacagcaaat ttacaagcagcatgaaacagaaaagaagaggcaatattcataaggggtaatggagatagagcatagggcatttacgccac ctgtatttactacaacaggtggaatggcaaacgaatgttgtagatatcattgccgattggcggagcttatatcgacaaag aaaggagaaccccacgctccaacaatatcgtagataagaactaaactgttgtcgaatacttaaaggcaccctgttatgtt tacgagggtctagaacaccgcgaagacgccaaattgcaaatataaggaacaatgatctagaatggcttagctgaattgaa catggtttttttttaaggaacacctttttaattgattattttttataacagctgctgtaccttttaaagcaatcaggatg ttttattggcatttttattttactaactaataaattagttattgatcagtttctacctatttgtaatgttttcataaaat tcatgtattgtgaaatttactgtcgtggcatgatttcatctcaatttatcattacnnnnnnnnnnnnnnnnnnnnncagt gttctccttatcaggtggtaaccggtaaaatttaccgcctcaagcaacagttctaagaacttcttaccgcctgcaacctt ttgaaggttcactaaaactatataagttgttttaaaaaatactggccaggaattgttccttacctgctgagctaaaactt ggggagaacactgttattaaaattgtatctggtagcctattgtaattttatgaagatactttataaaatcagattattat tattatatgtcaaaaaatttaaaatgaaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnaaaccattaaaaactttaattttagaagtttcaaaatttgaaccatattcataaaattaatgtataat atatgaccttcaagattttgaacttaaaacaaatacgcagaagtggagcagtccgatttagaagaaatttttcagacaca aagggtgctccaaacttggttgtctggggaatggtctgccagaaaatttcattgacaaaattgctctcaggacatcattt ctttttggctgtaagcttgcacattcatgcacatttagactctgcagatacaatttgacaaagtttattggttgagtgat gttttactgaaacactgctttaatatgcaatttcttagctgggtggaaaaccaataattgagctgtcgtctttggaagag aaatggaaacatttgtctttaccaaaggacactttggaggagcttcttaggtaaggacactaaactacaatcttttgtga ctttataatctgcactgtactaattcaacatgaatttcttgtgttcatttgatagtaatataactgtgctctcatgttag gattggaagttttccagaggaactcaaatggcttgatttccttgctctggcatgcagtgctgtcagtgaggtattaacat ttttaacagccaaataactgacacttttctatgctagctgtttgctatgattattaggctcctttgttctgatacttata aaaaattagtttgaaagtacttttcttgttgttgttgttttttttttcagagtctgacacttgccatgaagactgtttgt gagatattgacaacagatctggaaggtggtcctgcaaggattcctttctccctcttcaaagaactctacacatatctggc ggagattgatggagagataccaaaggagcatgttagcacagtcattgaccatcttaactatgacatgtaagttagctctc tctctctctaatggatttgtaagtgttgaagagtaataattgagtagagatctcttctcctgtgaaatggaaactggaat taagatttcagaaggttgttgatggctagttatccaaagcatagaaacttactttcttgtatttgctttgtcaaatttga cttcttttgcttccaacctttgtcaaatccagatcctgcttccctgttgagagacagttatggcaacagggaaatattat attctaagtttagcctctgtagttattttatttcctctttgattctccaattttttttgttgtcagattcatcttcagtt gtaccctgtaattagctgcttgtttctcattaatcagttggaccgttttgcaagcatagtttttttgacttttgaagaca taaaattaatgtaatcggttaggatgtgctcttatgagattgaaatactgtactctctgtcaatacttagcaaagtgttg cttctctttcagggaaaaacaagatggtcaaatttctccacggaattttatgagcgacagctgtccacctctctcaccaa atgaaagctcgtaaagtaatattattattgcctcttttcataccaccttctgtacatgtttcacaaatgccacaaaatct ttctgaactcagtttcacagttgtttcttgcctgattcatttatacttgtcaccaagttttcaatcggttatctcagtca aaaaaactagactgggttgtcttgagaagtattaaactttgcgtacctatcttcagaatgtgactatacatactggtagg ttttgctggaacaacaataactatcggaagaaccccaagtgttgtacatgtgttagtgaataagtgatcactggtttgga gtgacacagtgaagttttagtcatttagactttaagcgcacatgaaataatacttacagtacttacaggtttaaaaaaaa aactatattcaacaacaaaataaaaaataaaaagggaggaggtagttttttacaacatgcacagtggccaaagtagcaaa tgcttttgagatggtaaagccagatgtagggaatgctacctaaataatgtaagaggttgaagttgcaagtttcaaaagtt tgttaaccacagccatagttagtactaactatgccacaaccaatgagtttcaagttagttgtcattttccagcaagacat ttaaccgtccaaacagtccctgtgtgaaaattaaagggctgtcagtttgataagacactattcattaaatataccgaaag gaaagttgaaaagcctggttttggaaaaaaaaacggacaaagcagggataaactttggataagccaatgccaatttacat cggatgtcgtgtaacgaa |
Protein
Protein ID | aug_v2a.15817.t1 |
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Definition | - |
>aug_v2a.15817.t1 MNLIRETPPVKDRLEFQLGQPLEKPLTQGLLSVLHKQLGGKPIIELSSLEEKWKHLSLPKDTLEELLRIGSFPEELKWLD FLALACSAVSESLTLAMKTVCEILTTDLEGGPARIPFSLFKELYTYLAEIDGEIPKEHVSTVIDHLNYDMEKQDGQISPR NFMSDSCPPLSPNESS* |