Gene
Gene Model ID | aug_v2a.15906 |
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Locus | scaf7152 : 48516 ... 50270 : + |
To GenomeBrowser | scaf7152:48516..50270 |
Genes list of scaffold | scaf7152 |
Manual annotation
Study field | Transcription Factor |
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Gene name | Adi-clock1 |
Description | Named thus based on BLASTP results against NCBI nr and molecular phylogenetic analyses (NJ and ML). Adi-clock1 and Adi-clock3 are aligned tandemly in the genome. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.15906.t1 | gi|675630555|ref|XP_008943825.1| | PREDICTED: circadian locomoter output cycles protein kaput, partial [Merops nubicus] | 0.0 |
aug_v2a.15906.t1 | gi|698418810|ref|XP_009695085.1| | PREDICTED: circadian locomoter output cycles protein kaput, partial [Cariama cristata] | 0.0 |
aug_v2a.15906.t1 | gi|701313315|ref|XP_010017687.1| | PREDICTED: circadian locomoter output cycles protein kaput, partial [Nestor notabilis] | 0.0 |
aug_v2a.15906.t1 | gi|752895697|ref|XP_011266081.1| | PREDICTED: circadian locomoter output cycles protein kaput isoform X1 [Camponotus floridanus] | 0.0 |
Transcript
Transcript ID | aug_v2a.15906.t1 |
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Definition | - |
>aug_v2a.15906.t1 cggcatggtgtttggtcacgcttaggtggaacggcgaccggtgtcgataagcttcttgctaaaatgctgaatatagttgg aagcaagttcagcccattttacgatgagaaaggaagacgatgaagaactcgatggcgaaggcgggctaaaaaggtccaat cgaaatttgaacgagaagaagcgaagagatcgattcaacatacttttatctcaactcgcaggaatcgtttcaaataagaa cgagccgcgaaaactcgataagacaacagtactcaggcaagctataaacttcttagagaatcaccaatcacacgtccgca ctcgcccggataccagccggttcagtgcaacttggcagccgtcatttacgactgatggagagtttaacctgatcgttttg gaagcgttggattcctttgtactttctctggataatgacggacatattatgtttgcctctcaaagcgtgcttcctttgtt gggttatctccccgatgaattacaaggaaccagtttagttaaatacatggatgatcgcgatgcctcaaggatatggcccg agatgcgtttggctttagaacgcgaaaataccggaggcgacagtaagaactcgttccattttcaaatgttgtgtggtaat cattactctaagatctcaagaaaggttgttaattgtgaaacgacagtcatttcaaataatgattttaatcagagtgaaca aaggaattcgaaggtgataattgttgttggaaaagttctgcatcctccacaaccggaccgcgttgttattacagccgatt gtcaggataaccaattctcgtatcgccttactatggattggaaatatgtccatgtggatcatagagcatcttctattatt ggatttcttccatttgaggttctaggaacatctttttacgagtactgttgtggtgaggagttattcaacattgctcaata ccatagaattttaattcacctgggaaaagtgacaacttgttacttcagacatttgaccaaaggtcagtcgtgggtttggc tccgcagtagttgttatatttcatacaatcagtggaactctaaaccagagtccatatctggaactgcaacagttgtaagt tttgaagaagtttgtgccgagcaatcaaagttactgaaacatgatcgtgagtatttcagcagagtggtgccaaccaggaa ggggggagatccgttgtcttccatttgtagttggccatcatcaccagttaatgaaaagaatgaaacaatgcaacatgaag ttcacttggaggagagtgatgatgcagttgaagtcacaagttatgagcagaaggaaaccaagaaatccattttcatgcca catgatgttcttaaatctcttatgacaacccctagtgatcagttattagaaattataagcacgcatagtgatttacacct tgagtcagatgatgaacaaacagacaatcatcttcgttggttggaaaatattaaaattccatctggtctgtcaagaatgc aactaacaagacacctgaaattgctggaagagtataggaagatagcagaacaaattaggaagcaagagaagcaattgaaa ttgattaggaagctcattgagtggggcaatttacttttggaagttgacagcaatattggagttgttggagaatcatctgc tgattctgaagcatcttctatgtcaaatttaagctagtatcgtcattctgatatgtgccacctaaccaaatactg |
Protein
Protein ID | aug_v2a.15906.t1 |
---|---|
Definition | - |
>aug_v2a.15906.t1 MRKEDDEELDGEGGLKRSNRNLNEKKRRDRFNILLSQLAGIVSNKNEPRKLDKTTVLRQAINFLENHQSHVRTRPDTSRF SATWQPSFTTDGEFNLIVLEALDSFVLSLDNDGHIMFASQSVLPLLGYLPDELQGTSLVKYMDDRDASRIWPEMRLALER ENTGGDSKNSFHFQMLCGNHYSKISRKVVNCETTVISNNDFNQSEQRNSKVIIVVGKVLHPPQPDRVVITADCQDNQFSY RLTMDWKYVHVDHRASSIIGFLPFEVLGTSFYEYCCGEELFNIAQYHRILIHLGKVTTCYFRHLTKGQSWVWLRSSCYIS YNQWNSKPESISGTATVVSFEEVCAEQSKLLKHDREYFSRVVPTRKGGDPLSSICSWPSSPVNEKNETMQHEVHLEESDD AVEVTSYEQKETKKSIFMPHDVLKSLMTTPSDQLLEIISTHSDLHLESDDEQTDNHLRWLENIKIPSGLSRMQLTRHLKL LEEYRKIAEQIRKQEKQLKLIRKLIEWGNLLLEVDSNIGVVGESSADSEASSMSNLS* |