Gene
Gene Model ID | aug_v2a.16727 |
---|---|
Locus | scaf7964 : 9921 ... 16685 : - |
To GenomeBrowser | scaf7964:9921..16685 |
Genes list of scaffold | scaf7964 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 2-5 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 2-1. This gene model contains DUF1759 and Peptidase_A17 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.16727.t1 | gi|585677025|ref|XP_006819072.1| | PREDICTED: uncharacterized protein LOC102802310 [Saccoglossus kowalevskii] | 0.0 |
aug_v2a.16727.t1 | gi|390334133|ref|XP_003723858.1| | PREDICTED: uncharacterized protein LOC100892634 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
Transcript ID | aug_v2a.16727.t1 |
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Definition | - |
>aug_v2a.16727.t1 gagagtttttatcgtaacacgatccagggaaacgggctggctcccctgtctcgctaggggatagacccgtgatgggggcg cgtcgtcaatttttagcgcacaagcaacgattgccaaccagtcaaggttgtactgataaatatgccttctgtgcaccgta tgatggtcatttcgttaacaataagcaaaatcactgccgtccagtggtccgttcaagttcccagtcccaaaagacagctc atgtgaattgcgaagaatttgcacgtgatgtttctaattcaaataatttgtgtgatcatgtcaaccaagcagagaatgct ttgactaagatgatagagtcattaactggggtcatagcaaaactcgagaatttagtcaatggtatgtcatgcagtaatga cgctaaaagcaagcaagatggcacagatttgccacatgtttttgcttcgtcttctcaaaatgaagataatgtcgaaaact tctctagtaaagactctcctaaaaatgttgatgagcgtgttgatccaattaaccccgttgtttgcaagaacgaagtgcat ttgattaatcaaaagagtcctgttcaaaacagtgtatgttacaatcaagggaaggaaatggattcaagtgctgttttgca taacgtagttgttgaagttgatcctcaagtgtttgaagttgccaatgtcgaagaaagcgatgtgatttttgaagatgcac aagtagatgtgtgtgatgttttggaccacgttgatgtcaagattactgagtttgtagttaatgattccatagttgctggt tcgcatttgaccaaaaacgttacccggactctccaccaattttgttggactagccgctatagcgagaggtatcgggactc taaaagcacctcaaatgcaccacctcaattgatatcttttgtattttgcgtttgcttcaacttacatcaactcttattct tacctctagtattgactgaaatgtaagtctttgttttttgttttcctttgttttattagatcgctttatttgtaatttct ttatttcgtatttctttcgctccggccgtttatatttttaatgtcattattcattttgttaattatagctgtaccgtgac taaagttacgcgtacaagattaaactttgtatgtgaagctttgtctgcgatttgttcaacatcgaaagtacagatatttt gtgagtggaggacctgagtaaaacgcttggttgccgttgtgtgaaaggcttgggaaattcaactctgcggttttttgcgt aggatggtattacatcttgcatgtttgttgcttgcaaaccgaatgtgtcttcgacatttgtggtctggatatttgttgtg cttggtttgaatttcgctagctaaatgtaccgtggaactggtggatgaaggagcttgtctgaagaaaatctacgcgcgag tgctcggcgtcgaaggaacaatgtgacattagacgaacattctgtcaagttcgagcgaatggcggagttaaaaaaagaac gtggcggctacgcgtcgcatctgacacgaaagcgagatgagctaaaatctttgttggacagtgggcctagtgttgaccgc gttcagaaagggattgctcaggtgagagcggctcttaggaacttatctgattgtaatgctaagtttattcagttattgga aggggctgatatgccggatgaggtgccccgggcacaaatgtactatgttatggctgagaacgatagcagtgaagtgttaa gattagcggagcaccgtgtgagtgtgtcgtgtgcgttaaatctctcaagtagccagttagaaagtgaagtgaaaccagag gacagtgtcagccaaagtagtcgaagtacaaagaagtcctcttccacagccgcgtccagggcacggttaaaggctgcggc caggaaggcggctttaatggcgcgtgcacatgtcctgaatgatggattagagcttaaacgaagacaattagaattgcaac aggaccaagagcagttgaatttaagagctaagatctcagaggttgaagctgaggcaagagtttatcagatgtttgaggag agagagagttggagtgatgatatcagccctaaaagagctcggttaagaagtcacctcccaatccaaatggagctgagtgg tctgcatgagtggaaagaagaatgcggtgcctagcaagcaggatcggggagccagcgtcaaagaagagaaggaaagttgt agtgcagaagtgggtgtaaacgtttaacttgaggagcagaatccttcgctggacaaggtacaaaatgttggtttaagtga cacactccctgatgaaacacgcctccttcagatgattaacatcatgcagttgccaaaggctgagcttatgacgttcagtg gggaccctctggacttctggatgtttatgtgtagttttgataacagcattggtagtgccgctctagatgatagtgcaaag ttgaacaggctcttccagtattgcaaaggagaagccttcaaagtcatcaagtgctgtgctgttatgagcccgtcaaaggg ttatgcgagggcaagagtgctactgaaagaaagattcagggatgattacaagatctctgaaatgtgggttaggaaagtca cagaaggacctgttataaaatatggtgaggggcgtcgtcttcaagaaatggctgatgatcttagaagttgtaaggagact ttaggagctatgagtaagcttgaagaaattgacactagtaggagcatggtcaagattgctgaaagactaccacagcccct ccagagtcgatggaggaggtttgtgagtaagagctttgaaaaaactaatagatacccatcgattgctgaattggtgtgtt tcgtctcagaagctgctcgtgaggtcactgatcctgtgtttggcgtttcggagaacaaggtgcgcaagcctgaaaaaggc agaggagctagttttggagtgcaagccgatgagtcccagcaagatccaggacgttggggtagaggtagtgaccctaaggt taacgacgctaagatcaaacatgatgtctgccgtttgtgtagagacggacacagcttgcgtgtctgttcccggttcagag ccatgtcgccaggagaaaagctatcgtttaatttgtttggggaaaaaggctttgcttcagctgttttgatggtagacatg ttgcaagtcagttcagagcgggtgttgtatgtggtgtggaagggtgtaccgaaaagcattccaaattgttgcaccaatcc tttatgcgtccagcgaaggagaactttggagaacagcaggcgactcctaatccaggagcaagcagtcaccttattgagag ccatacccatgcttgcagctcaccaagacaaagacagaccaaattagcacttcccatagttcccgtgaaggcgagagcca agggccagagagcttatcactgcacgtatgccttgcttgattcaggaagcaccaagaccttttgctctgagtctttgatt gagaaacttggtgtgaaaggcaagcctagaagtctttccctaacctcagtcaacagcaatgaatctgcagatgtggagct ggttgctttggaagtagtagcggttgagagtggagcaggaagacctagcgttatccagctgccaaaggtgtacgcgctgc ccaacctacctaccttggagaactgtattgcctcggatagcgacttccgtaagtggtcttatctcaaagatcttcgagct gataagttgataagtcgggtgttaccattttgattggccaagatgttcctgaagccctttggtccctggagctccgaaag gggaaggaaggacaaccttataccactaggactcgtttgggttggtcccttaatggcccagttgagtcggagcccttggt tgaggagcctgcattctccaactatgttcatgctgacgagagactgaatgcacaagtggagcagttttggaaccttgaaa caagtgaagccttggctaacagtttgccacagtttttagttgatgacaagaaagctgttgatatgtgggaacagtcaatt gagctagtcaatggacattaccaaatggatatccccttcaagtccaagaacccttatttccctgacaatccagttatcgc tgagaaacggcttcggtaattaaccaggcggttcctgagagatcctgagctgcatgccaagtaaaaaggtgggattcaag aactgcttgataaaggttacgcagaaagggtgcctgagcaggagttagctgccacgcctggacaaacttggtacctgcct caccacaacgttgtcaatgaaaacaagccggagaagctacgaattgtatttgactgtgcagcaacctttgatggcacctc cctgaacaaagaggtcttgcaaggccctgacttcacaaacaacctcgtgggggtcttacttcggtttagagaagctccgg ttgcagtgatgggacatgtcgaaggtatgttccatcaggtgcgggtgtcaccgaaggaccgggatgtcctgcggtttctt tggtggaaggatggtaagataggaagtgaggttgaggtctacaggatgtgtgtgcatctgtttgggggtgtatggagtcc gaggtgtgctagatttgctctgagacatgtggccgtagatcataaaatgaattttcctgaagagactatacgaactgtcc tcaagaatttttatgctgatgattgtctcaaggccgttggtactacagaaggggccattaacattgtacgcagtctatgc cagctgcttgcgcttggagggtttcgactcacaaaatgggttagtaatgaccagaaggtgctggaggcagttcccgtaga agaaagagcgaagggggtcaaggacctttatcttgactgtagttctctgcctgctgagagagcgttggggatccactggg acattgaggtcgatcagtttagtgtccagattaagagaaagcacagggagtttacccggataggactcctgagtgtagtt agttctgtttacaaccctctgtggctggtatgtccgtttgttcttggtgccaagataatcttccaagatgagtgtaagtc cggcaaggactgggatgatcaactgagtccagagaatcaagtggggtggagtaagtggttggatgagatccctctactgg gtcagttcaaggttgaacgttgctgatgcctgcagatttcggaaggccggtgaaatatgagctgcatcacttctgtgacg cttccctgtcatgcagcttatggttctgtctcctatctccgtgcggtgaatgctgaagggaagattcgttgcaccctgct gctgggaaagtctaggttggccccgatcaggcagatgactataccaagactttaattgtgtgccgctgtgattgctgtga gaatggatcgaatgttgtcacgtgaacatactttggagatttacgattcggtgttttggactgacagtatgattgtcctt cagtatatatacagtcgcagtaagaggttccaaacctttgcggcaaatcggttgtcggtcattcatgatgggtcagtacc aaatcagtggaggaaggttggcactaaggagaaccctgctgatgatgtctccaggggtttgagtgggttcgaaatggttt ccagggatcgttggaagcgggtcctgaaggggtgtatgatgcgtagaaagctcagaggaaacccacaggttcaacgaatg gcagatcttccctttgacagggtaactccagggaagccaccattctcgttcgtgggtgtggactgtttcggcccttttgt ggtgaagacgggccggactcaaaccatatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccccttagcagcctctcatatgggaggcatatgggaaaggca aatcagatcggtcaggaaggtgctgaatatcattctgagagagcagaccttagatgacgaatgcttatcaaccttggtct gtgacgtggaatcgatcgttaatggaagaccgttgacagtctcatctgatgacccgaatgatgaaagtccactgaggcca aatcacaaatcatttgctgctccttcggggaggaccttacctaccccccggtcagtttgataagagtgatatccacggaa gacgctggagacatgttcaatttctctctgactagttctggaaacgctgggtacgtgagtatttacctattttgcaatta cgcaggaaatgattgaccccagagagaaatttgcagatcggagatgttgtgctcatcatgggagagaacaccccccggaa gaactggccgatcgggtgtgtaatccagaccttcccaggaaaggacggactagtcaggactgcccaagtgaggacaaggt ggtcgattctgaccagaccagtagccaagctgtgcctattggaagctgtgggtgaaagcatgtgaacatttatatttcat tactgtattccggatatgccttgacaatgaatactgatttaaaga |
Protein
Protein ID | aug_v2a.16727.t1 |
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Definition | - |
>aug_v2a.16727.t1 MGARRQFLAHKQRLPTSQGCTDKYAFCAPYDGHFVNNKQNHCRPVVRSSSQSQKTAHVNCEEFARDVSNSNNLCDHVNQA ENALTKMIESLTGVIAKLENLVNGMSCSNDAKSKQDGTDLPHVFASSSQNEDNVENFSSKDSPKNVDERVDPINPVVCKN EVHLINQKSPVQNSVCYNQGKEMDSSAVLHNVVVEVDPQVFEVANVEESDVIFEDAQVDVCDVLDHVDVKITEFVVNDSI VAGSHLTKNVTRTLHQFCWTSRYSERSLSEENLRASARRRRNNVTLDEHSVKFERMAELKKERGGYASHLTRKRDELKSL LDSGPSVDRVQKGIAQVRAALRNLSDCNAKFIQLLEGADMPDEVPRAQMYYVMAENDSSEVLRLAEHRVSVSCALNLSSS QLESEVKPEDSVSQSSRSTKKSSSTAASRARLKAAARKAALMARAHVLNDGLELKRRQLELQQDQEQLNLRAKISEVEAE ARVYQMFEERESWSDDISPKRARIGSAALDDSAKLNRLFQYCKGEAFKVIKCCAVMSPSKGYARARVLLKERFRDDYKIS EMWVRKVTEGPVIKYGEGRRLQEMADDLRSCKETLGAMSKLEEIDTSRSMVKIAERLPQPLQSRWRRFVSKSFEKTNRYP SIAELVCFVSEAAREVTDPVFGVSENKVRKPEKGRGASFGVQADESQQDPGRWGRAKENFGEQQATPNPGASSHLIESHT HACSSPRQRQTKLALPIVPVKARAKGQRAYHCTYALLDSGSTKTFCSESLIEKLGVKGKPRSLSLTSVNSNESADVELVA LEVVAVESGAGRPSVIQLPKVYALPNLPTLENCIASDSDFHVPEALWSLELRKGKEGQPYTTRTRLGWSLNGPVESEPLV EEPAFSNYVHADERLNAQVEQFWNLETSEALANSLPQFLVDDKKAVDMWEQSIELVNGHYQMDIPFKSKNPYFPDNPVIA EKRLREAPVAVMGHVEGMFHQVRVSPKDRDVLRFLWWKDGKIGSEVEVYRMCVHLFGGVWSPRCARFALRHVAVDHKMNF PEETIRTVLKNFYADDCLKAVGTTEGAINIVRSLCQLLALGGFRLTKWVSNDQKVLEAVPVEERAKGVKDLYLDCSSLPA ERALGIHWDIEVDQFSVQIKRKHREFTRIGLLSVVSSVYNPLWLVCPFVLGAKIIFQDECKSGKDWDDQLSPENQVGWSK CMIVLQYIYSRSKRFQTFAANRLSVIHDGSVPNQWRKVGTKENPADDVSRGLSGFEMVSRDRWKRVLKGCMMRRKLRGNP QVQRMADLPFDREMIDPREKFADRRCCAHHGREHPPEELADRVCNPDLPRKGRTSQDCPSEDKVVDSDQTSSQAVPIGSC G* |