Gene
Gene Model ID | aug_v2a.17084 |
---|---|
Locus | scaf8364 : 14136 ... 18329 : + |
To GenomeBrowser | scaf8364:14136..18329 |
Genes list of scaffold | scaf8364 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 20-33 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 20-1. This gene model contains Rapsyn_N, TPR_1 and TPR_2 domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.17084.t1 |
---|---|
Definition | - |
>aug_v2a.17084.t1 ataagagaattccagtcaatgggtgactacagaaaagccattgattatcatgaacaaggattgaaaattgcaaaagaaat cggtgatcgggccggagaaggggcagcttatgaaaatcttggttatgcttaccagtcactgggtgactatcgagaagcca ttgagcatcatgaaaaaagtttgaatattgcaaaagaaatcggtgatcgggctggagaaggaaaagcctatggaaatctc ggtaataattaccggtcactatgtagctatcgaaaagccattgagtatcatgaaaaagacttgaaaattgctagagaaat cggtgatcgggccggagaaggaaaagcccatggaaatcttggtaataattaccggttactgagtaactatcaaaaagcca ttgagcatcatgacaaaagtttgaaaattgcaagagaaatcggtgatcgggctggggaaggaagagcctatggaaatctc ggtaatgttttccagtcagtgggtgactatcgaaaagctgttgagtatcatgaaaaaagtttgaaaattgcaaaagaaat cggtgatcgagccagagaaggacaaacctatggaaatctcggtaatgcttaccagtcactgggtgactgtcgtaaggcca ttgagtatcatgaaaaagatttgaaaattgcaaaagaaatcggtgatcgggccggagaaggacgagcccatggaaatctc ggtaatgcctattggtcactgtgtgagtatcaaaaagcaattacgtattatgaaacacatttaaaaattgcaataaaaat gcgtgatctggccggagaggaagcagcctgtggaggtctcggtaacgcttactgctcactgggtgactatcaaaaagcca ttgagtatcataaaaaaagtttgaaaattgcagtaaaaattaatgatcgggccgtagaaggaagnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcctatggaaatctcg gcaatgcttaccagtcactgggtgactctcgaaaagccattaagtatcacgaaaaacttctggaaattgcaatagaaatt gatgatcggggcggaaaaggaacagcttatggaaatttaggtattggttaccagtcactgggtgattaccgaagaggcat tgagtatcatcaaaagcatttgaaaattgcaaaagaaatcggtgatcgggttggagaaggaagagcttatggaaatctcg gtaacgcttacgaatcaatgggtgaatatcatggagccattgagtaccaagaaaaatatttgaaaattgcaagagaattc ggtaatcgagccggagaaggaaaggcctatggaaatcttggtaatgtttaccaattactgggtgactatcataaagccat tgagtaccaaaaaaatatttgaaaattgcagtagaaatcggtgatcgggctgcagaagcaaaagcctatggaaatcttgg tattgattccaagtcactcggtgactatcaaaaagccatttagtatcatgaaaaaagattgagaattgcaatagaaatag gtgatctggccggggaaggaagagcgtatggaaatctcggtactgcttaccaatcactgggtgactatagaaaagccatt gagtatcatgaaaaagatttgaaaattgcagtagaaatcgctgatcgacccgcagagggaaaagccaatggaaatctcgg cattgctttcgcctcactgggttactataaaaaggccatggagcatctcgaaatggatttaaaaattgcgatagaaatcg gtgatcaggccggagaatgagaagcctatggaagtctcggtaatgcgtacatgttactgggttactacaaagaagccatt cggtatcatgaaaaacatttgaaagttgccatagaggtcggtaatcgtgccggagaggaaattgcctatggaaatgtcgg tgttgcttacatgtcattggctgaccatccaaaagccattgattatcataaaaaagatttgaaaattgcaatagagatcg gtgatcgggctggagaaggaggagcctatgaaaatctcggaaatgcttaccagtcactaggtgactatcgaaaagcaatt gagtatcatgaaaaaggtttgaaaattgctttagaggtcggtaattgagccggggcaggaaaatcgtatggaaatcttgg tgttgcttatcagtcactggatgactttcagaaagccaccgaatgctatgataaaggtttgaaaattttagtagaaatcg gtgaccgggttggataagggaggatttaccattgtattggttatggatactttgctcttggacaatttgaaaaagcggtg gagaattttgtttccgctgtggaaatctttgatactttgcgatctctcttgaagtctaaagatggttggaaaataaattt tcgtgagctttacgagacgacgtacactggcttatggatctcgttgctaaaaactggaaagatcaaggaggctttgcttg ctgctgatcaaggtagagcgcaaactctgtcagaacatttgttgattcaacatggaattgctccacccaaatcagctacc acatctctctccatgacgacattatctcgcctcttaacagggatttctacatcaattatttttctagcaattgatggact tacgatcaacatctggtatctgagcagaggaaataaaattacgtttcgacaaggaagactcaaggtagacatcacagaca aagatcccatacgcaccttgctacgaacagctttaaaagaaataggtgctgaagttagagtaatatgtgaagatcgcaca attgatgaactcactcgcgactgcccgtcaaccagagaagaatgcgaagaagtgaaaaagtcattccagccgtcagacaa tcctttcaaaccattttatgatgcagttattggtccaatttgtcacatgcttggacctcgagacgatgagttagtaattg tttctgatggagcgctgagccttatcccatgggtcgcagttgttgaatcaattaggattcgcactgtcccctctcttact agctaccaattgctctcaagtgtacccgaaggccatcacaagaagacaggggcgcttttggtcggaaatccatgcttaaa ggagttgaagaaacccctacacgacttaccgtgtgctcaaaaggaagtaaaaatgattgcatccattctcaacacgatac ctctaatggggagacatgcaacaaaagctgaagtgatgaaacagatgtcgtcagttggtttaattcatatcgcggcccac ggaaacaaactcacaggagaaattgccttgtccccaaatcctggatggacttcacaatttcctcaggaagaagatttcat tttaaagatgtccgatgtgcaggctgccaatattcgagctcgccttgtggtcttaagttgctgtcatagtggacggggca gaatcttgaagggtgagggtgtggtcggtatcgcacgcgccttcttggcagctggtgctcgttctgtgttgatggccctg tgggccatagatgacaaagctacaatggtgttcatgaggtgtttctaccaacacctaagggaaggaaaaaccgccagtat tgctgttcaccaatcgatgaaatatcttcgtgagtctgaggagttttctgagatgaggtactgggctccatttcaactta taggagatgacgtcaagattgagttcgagacaagtcacgtcaaaacatgcgagaaataaaagtctctcctgttcttttgt gactcatcactaccagtgtgacgtcacatagcaacaagtcaaatcttcgcttggcttggttaacgtaacgtaaagaagcc attgatgtagaacaaagaaaggacaaatactgcc |
Protein
Protein ID | aug_v2a.17084.t1 |
---|---|
Definition | - |
>aug_v2a.17084.t1 MGDYRKAIDYHEQGLKIAKEIGDRAGEGAAYENLGYAYQSLGDYREAIEHHEKSLNIAKEIGDRAGEGKAYGNLGNNYRS LCSYRKAIEYHEKDLKIAREIGDRAGEGKAHGNLGNNYRLLSNYQKAIEHHDKSLKIAREIGDRAGEGRAYGNLGNVFQS VGDYRKAVEYHEKSLKIAKEIGDRAREGQTYGNLGNAYQSLGDCRKAIEYHEKDLKIAKEIGDRAGEGRAHGNLGNAYWS LCEYQKAITYYETHLKIAIKMRDLAGEEAACGGLGNAYCSLEIDDRGGKGTAYGNLGIGYQSLGDYRRGIEYHQKHLKIA KEIGDRVGEGRAYGNLGNAYESMGEYHGAIEYQEKYLKIAREFGNRAGEGKAYGNLGNVYQLLGRIYHCIGYGYFALGQF EKAVENFVSAVEIFDTLRSLLKSKDGWKINFRELYETTYTGLWISLLKTGKIKEALLAADQGRAQTLSEHLLIQHGIAPP KSATTSLSMTTLSRLLTGISTSIIFLAIDGLTINIWYLSRGNKITFRQGRLKVDITDKDPIRTLLRTALKEIGAEVRVIC EDRTIDELTRDCPSTREECEEVKKSFQPSDNPFKPFYDAVIGPICHMLGPRDDELVIVSDGALSLIPWVAVVESIRIRTV PSLTSYQLLSSVPEGHHKKTGALLVGNPCLKELKKPLHDLPCAQKEVKMIASILNTIPLMGRHATKAEVMKQMSSVGLIH IAAHGNKLTGEIALSPNPGWTSQFPQEEDFILKMSDVQAANIRARLVVLSCCHSGRGRILKGEGVVGIARAFLAAGARSV LMALWAIDDKATMVFMRCFYQHLREGKTASIAVHQSMKYLRESEEFSEMRYWAPFQLIGDDVKIEFETSHVKTCEK* |