Gene
Gene Model ID | aug_v2a.17213 |
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Locus | scaf8496 : 46116 ... 51415 : + |
To GenomeBrowser | scaf8496:46116..51415 |
Genes list of scaffold | scaf8496 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 39-3 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains Death, VirE, NB-ARC and NACHT domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.17213.t1 |
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Definition | - |
>aug_v2a.17213.t1 ttaacattgcgcgtgagcttggtcctttatggaaaatgtttggccgagtgctggaagtcccggatgctgagattgatctg attgaagcagacgagtctaaagtctctgaaaagtgctatagtaagtgtaattgtgtagtttccatagtttgcatagtttg catgggttaacatatgattttgcgatgttgaggagtattattgttttcagaggtcatcagaatgaaaaagctgtttggcc tcaataatgttttttatatcctccaaaaaaaaagggctagttaacttcggtcttctttcattctggaaatagagttttag tgactgtttttttctgctttagtcaaaatgagtgataatttcaaacaattataattatgtaaaatgttttgtgtaggtgt tttaagagtctggcaagagaggtactcacatgatgcaacataccactgcttggcacgtgcattgcagcatcccgctgttg gacgaaaagatttggctgccaagtactgccgtcttcaaataggcaaggatgatgtagtagttgcgaagtattattagtat atgctcactcagtgatcttgtggtttcaagcatctgatcggtgcactatctatctcacagtaattgagaattattcactc cctttggagtgaataattaacaattattccatcaccgcgcgttggatatgagattgtaaatatggatgggaaacaactgt aaatatggatgggaaacaactggaataataaattattatttgttgctgaagggattattgccagatttgcttgaatgtca aatgcatgtgtggaccaatatgtaactgctttttggatggttttgactccaaggaaaccagtgtttgggcttgcacgata aacagagagtgggcactgaactgaaattaatgagtaagttagaacattggataaccagcctcatatccaacaagcgcgaa tggaataattgttttattaaattccttaaactccaaaaatttgaagtgggaaatatgagcgaaaaaagcgagaaaatccg agcgaaatcgaaaacaaaattgatggagatgcgatgttgtgtaacacctcgtggtcagacagacgtaggctcatcacaaa aagcatttcttgccttttagcgttcttctaaacgtcggcattgatccaaactttccacaaaacagtttttttttggcttt attcagagaaaaattgtgctttccggcgaaaacattttagcttagcaacacatagcgcaatcatttaccatataaggtca aactaaggtatatgagctgataaccaagactgagtgaaccaatcagagtacgcgaaatgcattatccaaggttgagaatt taataatgttaaatatatttgatgctattataagaaattcgcagattgagataaatcggtttaaagaatatggtcctcgc aggttttaacgctacttaagaagtagcgagaaaggggctgaacatttagtcaaaactgttcatgcctttcttgctactac ttacaaagtgcaagaagcaaaagctgaaaattcctatcatgtatttatataactaaaattccgaaaataaccccgtcctt gtactagccccaagaaatgtaagccccccaaactcgtaacgcaaaaaacccttggttaaattgccccttcgaaaataagc caccatgggcttttacttggaaactgccctcaactacaaaataaaagaaagcaagaacggtacggtaccacatatttttt tatttgccttctaactataagctaacccaatcaattttgtaacgtacatttcccactgtatataagcccctccacaaaca agcccctcaaaaagggccttcgaaaatataagccctgaggcatattttgggagttttaccgtatgtgatatttcatgaat tgtattcgtcctcgaagaagtttcccttaaaaaattaaaaagctttggcgttttacaaagctttcaaaaacttgaacaac gaaacttgatgcagttcttagaaaattaagatttgaagttttcagcaccccacaagcacttctgttgtcttttacaagtg aaattcatgttttgttctatgtagtgacatttttttacctaggggttaacaccttttgtttgacgttgtccgcaggcctt tcttcatgtgttccacccaaaagaaaaagagaaattgaaaagaacgagactgagcagccagcaggtacagtccatgaaat gcagcaatgaaattagtgagggttaggattacggttggttggataattatcgtttgaaagattttttttttcaagtttat cagtagctttgacctctcagcagagctcgataaagccattaaaagtgagacaaaatctgatgcataaataaaggtttatt tatcccaatgagaaggcgctggtcatttattgtgatttgttgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnngatctatttttggctttcacgcgtcgtgtattgaacataaagagaaattaa accttgatcattgtcagggctggaggctaacttttcagcttgctaacccagtggctagtgacgggtttgatccaccagct aaatcaaatttttcacaagccagacgcagaactttcttttctttcaaaataccgattcacgatcaaaataattcgttcca ccttaactctatatgttgcaaagataggcatcgatgttataattatacaggcgtcgctcaacaacgaaaaccgaagttct cgcttccgggagaaattctcacggaacttctcaactcgccgccgaaaaacattccttgctttcaaaatgccaattcacaa tatctcgtgaacacaataatgcgttccattataacttatttccaagttgcaaacataggcatcgataatatataggcatc attcaaattttcgaacaacttcgattttttaattgtttgaaagcgtgtgtgacctccagatgctgcgtgcatgaaacatg tccgtagagttccgcatgatttcacacatgactaatcattagcggcaagcagttcatttgtcagtcgccgctctgtacaa acaaaaaagtcaaccaatctttcgtcgtttaattagtaatttaaagttcttgtttgggcaaagaaattatatatgatatt tattacagctgatgttttaaattccgcagcctttgactcaatttcgttttgtgaacaatttgaaattttatgaattggtt tcctctgggcctccagtgctcataaagtttcactagccaaaatggctagggaagcgctgaaaccactatccaaaatggaa tttttactagtctgtggctcgttggctaccgttagcctcgagccctgactgtattagaaagaatatggctttcaaattaa tgtccatgtttaatgaatcttttctacagctcgtacttcgtgttcaagccacatcacagaatggatacgagaagtttgcc agaagcgtgaaggggtgattatgccagttccttggtgtgaagagttcagctttcacataaaggacattttcaccagactt agaatagttgataaggaaaagacacgcggaatagtgacctcaagagcagtcaccagcatgacaagtatctttacaccaca cgaaggttgcgaacaaccagtgattgtgttaattgaaggcgaacccggcatgggaaagactacctattgccaaaaactgg tgtatgattgggcaagcaaacaatgtcgcgaatgggacgagtcgtttcctagaattgatgtgctcctgttcctcagatgt cgtgaaatcaaatctagtaacctttgggacgctattgaagatcaaattctgccaaaaagaattcaaccagaggcaagaaa aatgttttttcaattcttgaaagaaaatccgtccaaggtgttgcttgtgctcgatgggttagatgaggcagacccacgaa aactcgaaatgtacttggagcttattcaaaagaaggagcttcctggctgttacattgttctcacatctcgccaggaagga gggcgtagagtgaggcggtacactgatacattgttagaaattgtgggattcacaccgactgatgcggagagttacattag aaagtattttaaacaagacaaagcacacttggcagaggaacttatttcaaaatttccgtttcataaggaattaagggaac taacacaaaacccgttaaacactcttctgctgtgtgttatctttgaggatttagaaggagttctaccaaacagcaggacg caactttacttggagatcgttctctttattttgagacgttatgaaagcaaggaaggcttatcaaatagaggtaaagacct tttattagtgtacaacaaggaactgatgatcctaggaagaactgctctagattctctgcgtaaacaagagctgtatttcg atgaccataaaggggatatcaaggaaagtttgttgatgaagtttgggtttctctcgatccagtctggtgttagcaagaga gctccttgtgaccgttatggattttttcacaagacttttcaagaattcttttctggttacttccttgccttttctattat tgatgatgttgcgaactttcagtcagtgctaaccgatcctcgatacatgggtgaactatttcaagtttttaagttcatga gtacaataatagccaaggaatccgtagaaacttcattgtcagttgtaaaacgtattgcttcaattttaaatgagacaggc ctaacatctgatgaactcgtttcgcacttcaaggttgctcattgctttattaacgaatgcaaaacttgttcaggagacct tgacaaaaaacttgcttgtacctttggcgaaagtctagagttggttgacgtggtgttgcgctcaccctggtttcttgtgg gggatgaatatattgggacgtttttcaagagtctcgccgttaattctaccgtaacaaacttgaagttgtgtgaggagact ttgagtactgaggatatcaatctgcttaccgaggccctcacagtaaatacgtctcttttttctttgaatttgtctgacag ctccattggtgatgaaggagcaaactcacttggtcaggcactcagagtaaacacctctctttcttctttggacatgtctt tcaataattcggttggtgctgagggagcagattcacttgctcaggccctcaaagtaaacacctctctttctcgtttgaat ttgtctgacaattccattgg |
Protein
Protein ID | aug_v2a.17213.t1 |
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Definition | - |
>aug_v2a.17213.t1 MFGRVLEVPDAEIDLIEADESKVSEKCYSVLRVWQERYSHDATYHCLARALQHPAVGRKDLAAKYCRLQIGLSSCVPPKR KREIEKNETEQPAARTSCSSHITEWIREVCQKREGVIMPVPWCEEFSFHIKDIFTRLRIVDKEKTRGIVTSRAVTSMTSI FTPHEGCEQPVIVLIEGEPGMGKTTYCQKLVYDWASKQCREWDESFPRIDVLLFLRCREIKSSNLWDAIEDQILPKRIQP EARKMFFQFLKENPSKVLLVLDGLDEADPRKLEMYLELIQKKELPGCYIVLTSRQEGGRRVRRYTDTLLEIVGFTPTDAE SYIRKYFKQDKAHLAEELISKFPFHKELRELTQNPLNTLLLCVIFEDLEGVLPNSRTQLYLEIVLFILRRYESKEGLSNR GKDLLLVYNKELMILGRTALDSLRKQELYFDDHKGDIKESLLMKFGFLSIQSGVSKRAPCDRYGFFHKTFQEFFSGYFLA FSIIDDVANFQSVLTDPRYMGELFQVFKFMSTIIAKESVETSLSVVKRIASILNETGLTSDELVSHFKVAHCFINECKTC SGDLDKKLACTFGESLELVDVVLRSPWFLVGDEYIGTFFKSLAVNSTVTNLKLCEETLSTEDINLLTEALTVNTSLFSLN LSDSSIGDEGANSLGQALRVNTSLSSLDMSFNNSVGAEGADSLAQALKVNTSLSRLNLSDNSI |