Gene
Gene Model ID | aug_v2a.17218 |
---|---|
Locus | scaf8506 : 8646 ... 21273 : + |
To GenomeBrowser | scaf8506:8646..21273 |
Genes list of scaffold | scaf8506 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 39-61 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains Glycos_transf_1, NB-ARC, NACHT, and LRR_1 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.17218.t1 | gi|754352239|ref|XP_011270750.1| | hypothetical protein, variant [Capsaspora owczarzaki ATCC 30864] | 0.0 |
aug_v2a.17218.t1 | gi|470292368|ref|XP_004343609.1| | hypothetical protein CAOG_07735 [Capsaspora owczarzaki ATCC 30864] | 0.0 |
aug_v2a.17218.t1 | gi|470298815|ref|XP_004346276.1| | hypothetical protein CAOG_05603 [Capsaspora owczarzaki ATCC 30864] | 0.0 |
Transcript
Transcript ID | aug_v2a.17218.t1 |
---|---|
Definition | - |
>aug_v2a.17218.t1 gaatattcatacgttttccgatttcggtaagttatagtttgttatttctgcccatttgcttggttttgttcttatccgtt ggtattttttcttagtgtcgcctgcataaacaagtttccttccttacacttggttcactggttcgcgtcaacgttgctcg cattgcgcgcaagtgggaagagggacttaccaagaaacatctgatctgcagaccatagtaagtgatcgcgtttttcttaa gggataaattgcgggtttcataaagcaaaatacatttaaaatattcttgaaaaacctctagagtgcgtcatacatgcatg ggtgatttcaatggtcaaatcatcaacttttggtttgccatctgtagaagagcagcgaattcgctaggttatctcaggtt tgctagggttcaaattgtgttcagttagcctgaatatttgatgcaaggctttttaggaactgctaagtgtggttttattt acgagctagaataccgttccgcataacagtttcatctatttacttttaattataataatgaacgttggttgcaatattca ggtggagcgttatttaaaaacaatccaaaacgctgtgatatatttaggttttttatagtgaaattgcggtgtagagctac tgtatgcgacttgaggaaggatcaaacaatacgcgaacgatcttggttttttcccctcaaagtgacggagttacgcatga aaaatttggctccagggtttacagataattatgtcaaaaagaagacacgatttgatgtgatattaattatcggttaagtt tcgatcatgatgtttttctctcgcggtttcgcgagtgtacaagattaaggacgttcgcgcccattgctactgcgcatcct tacagggcacgcaaattcacatgccacgtcatgcatcgagcgcgcgcgctaagtactaaaaaataaacaatgatagggaa gatggccattgttataactttgcttcaatttaacgaccttggatgctcggtgacccctacttttcttttcagaaacagat tttattcacaattatctccacattatccaaaaatgaacaaaaaatcaatgtgggaagttaaaaaagtttcaagttttctg tcctccggacgttaaatcctgccatcttgcggctccaaggcgcaggaaactatggtggctacatgtgaacttgttcttta aggaacctcaacagttaacttaattcacttgatgggtccacttaaacaaagtttgttacagaaaatttcacttcaaaggt gtaattgcaatatttttgggcttagagacactatggccttactcgctaaagaagccggattttaaagattttgggtgttc ttccaggcaagttctctccgaaacgaagtcggtgacgcccccattatttttacatttctgacatcactaactcatcatct ttcaatgctaaaatttccaggaaaaaattaatgttagaaaaatttggcgcgaacgtccttaaggaaagaatacctttcgg taaaatggtgcatcatgggtaaccaaagcgttcgttttgagtgcacaagaagaacttacaggcattacacggagagaaga gtggtgaaaatatttccacagagcactgttttatttcgaggaagggttcccacaccagctaagatgcgttaggaactttc tcttctttcaacgaattagtagaaggctgcgatggatgtatgacttaaaaggaaaatccagtgcatgccgattcatgcag acagttggttttaggcagcgctagttttatgtgatgaaaaggggaaagctcacaactggaaacaagaaggaccactttgc gtttttagccttttcgtttatctacgaattatggaagtataaaaacaagccaagtaagaacttttaaagacaaaatcaac aaattattgcttttatagtaaaggtacatatttgcatacgctaacaaattatattgctgaagtcctagcaaatttcttgt gaacaaaatactcttgtatcacaaagagcaatcattaacatgctaaatgtggttcgaaccatggtgaaattaaacgcttt ccaactacacattatgtctatcggagccttcaatattactttgttgaaaaaagaaaaagtcacttaccaaagctgttgtt ggaaaccttccttaaagtataacattgctctttagaaagagctttgctgttttgtgtacttgtaatccctggaagttctt cttgtgtgaacaattcaaataccctgcttagctatgatgcatggttttcctgaaagagcttattacagtggaaagcttga gtggtggtctcatgtttaaaggaagggaaattttcaccttaattgaaattttttcaattaaggtgggtaatagctggaat aatatttttgaccaaggatagatcattggttacaggcgcttatacacaaagttctttgtccacctatcatgactgcttac tgcatggacaaatgttgtatatactatatctgtgcacatcattgccggctaatcagaaaacagttaatgaggcaggtatt ctcccgttaaaaatgcttgtctgaatgtgacaaaatttcaagatgaccagttttatgtatcattaggtgaatatttttgc atcaagttttttgtataaataccaagctcccaaatattaaatttttgtcttaaattgaatttcaatgtagatgtacatgc atcagtacagnnnnnnnnnnnnnnnnnnnnnctttactaatgcaagtacatctacatcaagcctatttttttaggatttt gccaggggtggaactggaataaagggatcgagcctgttaagattttgtgaataaaagcacttcccatttacctttaattc cgtacagcatgtcaaataattaagttttatgatgttagtcagttcttgttttagtttgttttgcactatttttgtctggc aagagaacattaaagtacagcatattgatcatttgtgttaaaatgcctcctcttacacttttttgtggaaaatgttgatg cacaggtgaagtgaagtgtactggaatgaaatgtgtgaaaattgaaagtttcctgtgttcccctgttgagaattccagaa cattaaaggcataaaaggactgcttctacctctgctcatcatctgtaaggtaaattaggtaaatgtaccattttgcatat taggtgttttcttttttctagatcgaggaaggagcttgctcattaactcaaaattttagagttttcttgtgttgatggtg tcatcagccaatgatacatggtaatgttacaataatagcttttgcaaacaataagactgacgtaaagttacttttggtgc tcctccaatgtccaagcaatgttacaccactataacttcaactatatattagtatcatgttcacccatgctattgttgct tccattcctattgttctgcttctttcactgctcatgtcactgcaattgccactgctatttccactctcaatgctgatgct actgctaaaaatacgggattttctaataattattgatcaatcaagtgatacacttaacagaaaattacatccaaaatctc caacattattacaacacaatacctttgaggggaaggtgtttcaacagatgctgtaacattttaatgatgtttgtgagcct tttgcgcctagaaaatctcaaaacacttaaaatacatgaaagaatgaagttgcattaaagcgaacttgttgtaggactta gtttccagggtactgtagctcacactcttttgtgcttgattgcagaagcagaaactgttttctgcttgtgtattgatgaa tttcgtttgttataccaagtgttacttttccaccagctgggtaactgtgaaagtttttgttggcatataagtcaattaaa ttctcaagacccaaaaggtcgacttatgtactgtaaaaaattgtacctctgctattactattaacctctgttttgcattt ttgcaatgttggaatgttattgctattaccaatgcaactacactggttctttcacagctactgtcattgcaatcgccagt taatcctactgtttatgttgttgctgtagatacagctgctaagagacactgcccatgacattgcagcagactgattgcca ctgttactggcaaggcacaattacttcatctgcctccactagtgactgtcactatttttggcaatatcattaaacaaaac aatcttactgtttctgtggcaatgtctacttctgcagctattattttgatatcattttattgttgtctgctgcagagcta gtgctttctcctaatttttttcgtgattttagcttacatgaaggactgctgttaaatgtatagtgatgaaaccgtctctt tcaaattgtaataatgacaagcaagtgttcccttaattcctttaagccatcctccacacttgcattgcacatttggacaa cggaagggacaaaacacagggcacaggtcattgttttaccaatatagaaagtannnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnttagcttttatgaaggtttaggataccttctgtctttgtaaaacagtgacctgtgacctgtgttttgaacct gccgtactttcatatatagattttgcaattttttttggatcgatataccggatcattggataatgcaattcaagactttt tattggcttagctattatggtatctgggccaatataccatgatctacaaatatggtaagcgtacaagtgagcttaaaatt ttccttcaagaaacaattgcggcggaaatcactgcgcactggagttgaatggaaaggaagtcattgaactgttagaaaac gcaacaccaggcagttcaaggaaaaccacaaagtatgccatgaaaataatttatttcaaggtaaaaacttaaaaacttga ttttgacaatttaagcagacatgttagtcaaagcaaaacaatgcaagttgaaataattatctgtacattgtaacatacgg tttcgtctcacaaaataaagtcgaaaagatttttctaatatcttggggacatttttaataaaacaattattccactcgca cttgttggatatgagatgattacagccaactcggtgctacaccactcgttggctatccatcatctcatatccaataattg tcaattattgaaggtattcaccatatttatttatcagtctgtctttaccatttgcctttttgttagtgatgtctcagtcc gtttgtctcacattttttttgttcttttcattttcaaggagcttctacacttctgtccaagatgccccttcactcggtgt agtgtcctaattgatattcctcttcatggcatcaagtttgaggcaacctcaagatcatgatagaactgttgaacttcaag tcaccattttggcctcagagtggggatccagtaatggtggactttccaccattaacagagagctggccattcaattagcc aaatttcctgacgttaaagtcactttctttttgccgaaatgctcccacgagagtaagaaggaagcacagcgccatggcat attcattgttgaggcagagaggcgtccagggttcaatgaagaactggattggctcagctttccaccggaaaatttgcaga tagatgtagtggttggtcatggtgtgaaacttggtcgccaggctcaatttatccgcaattctcacaaatgcaggtgggtt catgtagtacacacagacccagagaaactgggaatgcacaaatgctataagaatccaatctcaaagggaggacaaaagca tcacaatgaggtagagctatgccagatggctgatttagttgttggagttggacccaagttgacagaagcctatcgcaagt accttcgctggtgtaaaaaagatgaagatgtttttgagttcactcctggtgtttttgctgattttgcctgtgtggaacaa gctcttgttgaaagaaaacaccgcagtgttttggtgtttggtcgaggagatgataaagattttgagttaaaggggtttga tatagcagcaagagctgttgcagcactgcatgatacagatctggtttttgtgggagcacgtgatggaaaagagcaggaga tcgcagaacgattgcttgattcaggaattcctaaaggacatctaactgtgaggggtttcagggatcgaaaagctctgaag caagaattctgtcaggcagatcttgtgctaatgccgtcaagaaatgaagggtttggtttgacagggctagaagctctgtc agcagggcttcctgtaattgtcagcaagaactcagggtttggagaagctctggacagtgtaccatttggttcttcatttg ttatagatcctgaagatcccagtgcatggacagaagccatcaaaggtgtctggaacaaagacagacagaagcgacttgat gagactaagcttctgcgtgactcctatgaaaacaaatacagttggtctggacagtgcaaaaatcttcttgagaagatgtt cagtctacttgagaataaacaaggtattttgatagtgctttttatgaaaactgttgcgataaaaatttgacgtattgaaa aaatcccagggagggagaggcaggtgtcgcttacttgggtgaccagtcacttccatttttttatatctttatatactgct tgtaattttgttttttgaaagagaaaatatcaaaataccagtaaacagtagtgcattttaaattgcattagcacttagag ctccctcattgtttattctttatttctctgtcatttattcaagcaatcaaggtcttgttaagatcaacacattttttatc atttaaacctaatgcatcctccttagcaatttagaaacatgtcattcatgtgaagcagtgttaagaatttaattgatttt catgagttctatgctgtccatggttacgataggtagaatagtttaggtatgttctgtttgaaaaacgaggactgtatgac taggtttgaaaactcgaggcgaggccgagaagtttagacctgataatacgggactgcgagttttttgaacggcttcaaaa atgtgtgttcagacgcgtgtattgaggaaattggcgtactagaattaagtgagtgcacctcataagcaatatggtaattt taaaagcatgcttctttttcctttagtccttattctgtgttttctgtggttggaagaggttggttaaatacatatgtcgt gtaagagaaggttcagagaattgaaaactgtcgatgaagaaaaaactctgttggaaaaatccaaatcaacacaatatcgc acaaagtggtcttgctataaattgtttccacattcagcccagaactctcctggcactgaaaccaaatctgccaccaggag gttcatgttaataggtataagggttcttatacacgtgatcgatttgcgtcttgtgataggctaatatgctcttaaattat tgatgtcttttgcatggaagttaaggttaagtcagatgaatctgccatgtcagnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnntatgattcttatagttattgatgaaaataatttatttcatccaattgtcttgttggactgtacatccggaa aatagtgattactgaaaatacttgatttcaagatgagtttgatcgacacttaaaacacgtgaatcatattgtgtatgtaa taaggggaacctacatctgcccttaccagagataagtgattggtgaacattacaacttatcttatcgcctatatgggtct ctgaaattagccttaaagttgcaagaaacgatgttcaacaacaaaactgaatccaaaagatgtcataagggagatgtcaa agacgagcagtgacaaaaaagtgctgtggtttcggtctaaacccgatatcccttgttctccgaataaacaataccaatac caccttgtgagctcgatttaagcaaatggagattgatttcccctaaaaaactacaacctgtttaattttctctttttact tagattgctcagtggccaaaactctgcttggagcattattaataatgactgatgcttttgttattattgttattgctatc attattgatatttggtgttttttataccgcaactgtttcattaggctcttctgaccaggatgaggacattcagggaggaa tgaagaggaaaagaaaagaatgcagcgatcaggaaaaagcaggtgaactaaataaaagttttcaaagcttggtgtcaatc ccgccagttttcttggtatttgtctctaggaatatgtgtcttttgaatagttgataaaattttccactttggagccaaac attcacagacattggacaaattggaaaatggcggaaaagcagaattattgaacttctggtcatttgacttttattttagc gttgtactttacggtaaacaatacttacaccaccttgggagctcggtttaagcaaatggttattgtttgtcccctgcaaa attgacaatttgtaatattttctctttttacgcgggcacataaaagtgtctcagaggggccatgagtatcggtttttttt taccgtaactgttttaattgcagcgatctggacaaggcaggtaaactaaattaaagttttcaaacctggccggccatccc gcaagtttccttgaaattttgtctcttggaatgtaatttttggaatagtagatataaagtttccacttgggagccaaacg atcatgcaactcggtgaaataataattgcaaaaaaggtaaaacggtggaccaatttttgaacttttggttattttacctt tattgaagcattttacttcacgatactctgggcttaattcttttcataggcgcttcatagcggttgaacagggagttttt ggtcacgggtgccctagtaggatctgagtagcctgtggccacctatctacctccaagttttattttgtttgttatgtgat gtatcaaaaataaaaaaaagtcaagttggatgtgttttcgcctctaaaaccttatcttacattttatccaggaggtcaaa ggcgcgtcataaagtggatacaacaaatttacgaaaagtgtgaaggggtgattttgccagttccttggtatgacagatcc agctttcagatcgagaaaattttcaccagacttagaatcgttgcaaaagaaaagacacgcgaaaaagtgacaaaagaagt gacgagcatgtcaagtatctttataccacaccaagattgccaacgaccaatggttgtgttgattgaaggcgagcctggca ttggaaaaaccacctattgccagaagctagcatatgattgggcaactagacatggtcgcgaatggcatgagtcttttcca agagttgaagtgcttctgctcctcagatgtcgtgacattgaatctaactgtatatggaaagcaattgaggatcaaatttt acccgagggcattgaaccagaggtaagacaaacgtttatccagttcgtccaagaaaatccttccaaggtgttgttggtgc tcgatgggttagatgaggcagacccagaaaaactgaaactcttgcgtaaactgattcaaggaaagctgctccctggttgt ttcgttgttcttacatctcgccatgaagctggaagtaacataatgccgcacaccgacactctgttggagatcgtgggatt cacgacaactgatgcggaatgttttataagaaggtactttcaacaatcggacaatgaacacttagcagcgacactcattg caaaactgaagtcagatagtctatatgaattaacaagaaaccctctaaatactctcctactctgtgttatctttgaggat cttaaaggggttctgccaaacagcagaacagagctgtacatacagattgtcctctgtgttttgagacgttatgaaaacaa gaatggcttgtcagttaatgataaagacctccttttagtttataagaaggaattgatgatccttggcagaatggcgctag attctctgagaaaaggagagctgtattttgaagaccatcaaagcgatttcgagcaaagtttgttacctaaattaggcttt gtgtccatccaggctggaggtggcaagagagcaccctgtcctcgttacgcattttttcacaaaagttttcaagaattctt ttctgcctttttccttgccttttctatgattgacggtacaatggactgcaagtcagtggctaataaagaatacgaagagg aattaagtgaagtgttcacatttatgggcggaatcatagccatgcattctgaagcaactgctgtatcaattgtaaaaagc attgtatcagttgtaaatgtgtcagactgcaaatccagcgaccatcggacctacgtgaaactggctttaagcttaatcag tgaattcaaacttttttcaaaaaacctgtacgcagagttagctcatgtatttggcaagagtcttgagctcgtggacttga acggaagcgatttctcccaccgattattcagtacgctattcttggccttaagagtaaacacctctcttacttctttggat ttgtctgagaactttattggtgataagggagctaattccctatctgaggccttaagagtaaacatctctcttacttattt ggatttgggtgggaactccattggtgataaaggagctaattctctatctgaagccttaagagtaaacacctctcttactt ccttggatttgcgttataactccatttatgctggaggagctcattctgtatctgaggtcttaagagtaaacacctgtctt acttctttggatttgtgtcataactccattcatgctgagggagctaattccctatctgaggccttaagggtaaacacctc tcttacttctttgaatttgtcggagaactccattagtgataagggagctaattccctatctgaggccttaaaagtaaaca tctctcttacttatttggatttaggttggaatttcattggtgataaaggagctaattctctatctgaagccttaagggta aacacctctcttacttctttgcatttggatgggaactccattcctgctaagggagctcattccctatctgaggccttaag agtaaacacgtctcttacttttttggacttgggtaagaactccattggtaatgagggagctcattccctatctgaggcct taagtgtaaacacctctcttacttctttgaaattgtttcggaactccattggtgtgagggagctcattccctatctgagg ccttaagagtaaacacctctcttgtttctttgcatttggaggggaactccattggtgatgagnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnataactccattggtaatgagggagctcattccctatctgaggccttaagagtaaacacctctcttactt ctttgcgtttggatggtaataagtgagttaattccctatctgaggccgtaagagtaaacacctctgttgttgttttttta acatttgtagggtctttttcctctccatgtataggtcaaggatttttaataggagcctccgatgttgctcgtaaattaga tgaattacagttaacagttaaatttatatttggacacgaatacagtgaagatccatagatagggtgctctcgaacctaac gcgacagaagggtctacttttatttttaatcgaagtgcgtggtgtagcacatgttattttcatcgtttggatcaaaccga gttcctttcccaaagataactcaactgaaattcaagaaatttctgctgtataaaattatattttaaag |
Protein
Protein ID | aug_v2a.17218.t1 |
---|---|
Definition | - |
>aug_v2a.17218.t1 MASSLRQPQDHDRTVELQVTILASEWGSSNGGLSTINRELAIQLAKFPDVKVTFFLPKCSHESKKEAQRHGIFIVEAERR PGFNEELDWLSFPPENLQIDVVVGHGVKLGRQAQFIRNSHKCRWVHVVHTDPEKLGMHKCYKNPISKGGQKHHNEVELCQ MADLVVGVGPKLTEAYRKYLRWCKKDEDVFEFTPGVFADFACVEQALVERKHRSVLVFGRGDDKDFELKGFDIAARAVAA LHDTDLVFVGARDGKEQEIAERLLDSGIPKGHLTVRGFRDRKALKQEFCQADLVLMPSRNEGFGLTGLEALSAGLPVIVS KNSGFGEALDSVPFGSSFVIDPEDPSAWTEAIKGVWNKDRQKRLDETKLLRDSYENKYSWSGQCKNLLEKMFSLLENKQG SSDQDEDIQGGMKRKRKECSDQEKAGGQRRVIKWIQQIYEKCEGVILPVPWYDRSSFQIEKIFTRLRIVAKEKTREKVTK EVTSMSSIFIPHQDCQRPMVVLIEGEPGIGKTTYCQKLAYDWATRHGREWHESFPRVEVLLLLRCRDIESNCIWKAIEDQ ILPEGIEPEVRQTFIQFVQENPSKVLLVLDGLDEADPEKLKLLRKLIQGKLLPGCFVVLTSRHEAGSNIMPHTDTLLEIV GFTTTDAECFIRRYFQQSDNEHLAATLIAKLKSDSLYELTRNPLNTLLLCVIFEDLKGVLPNSRTELYIQIVLCVLRRYE NKNGLSVNDKDLLLVYKKELMILGRMALDSLRKGELYFEDHQSDFEQSLLPKLGFVSIQAGGGKRAPCPRYAFFHKSFQE FFSAFFLAFSMIDGTMDCKSVANKEYEEELSEVFTFMGGIIAMHSEATAVSIVKSIVSVVNVSDCKSSDHRTYVKLALSL ISEFKLFSKNLYAELAHVFGKSLELVDLNGSDFSHRLFSTLFLALRVNTSLTSLDLSENFIGDKGANSLSEALRVNISLT YLDLGGNSIGDKGANSLSEALRVNTSLTSLDLRYNSIYAGGAHSVSEVLRVNTCLTSLDLCHNSIHAEGANSLSEALRVN TSLTSLNLSENSISDKGANSLSEALKVNISLTYLDLGWNFIGDKGANSLSEALRVNTSLTSLHLDGNSIPAKGAHSLSEA LRVNTSLTFLDLGQGFLIGASDVARKLDELQLTVKFIFGHEYSEDP* |