Gene
Gene Model ID | aug_v2a.17915 |
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Locus | scaf9399 : 24 ... 8595 : - |
To GenomeBrowser | scaf9399:24..8595 |
Genes list of scaffold | scaf9399 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 52-2 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 52-1. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.17915.t1 |
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Definition | - |
>aug_v2a.17915.t1 cttatgttttgctttgttttttttccaacaagcaaaaaaaaattaagttcgccaatagaacaataaccaatatagatttc agaaaagttatttatcaagtggcggaactttggtttctccttaaaaaattggtgttttagctgtgattgataagttcaat ttggggaacgaggcaaaatggagagaaagatgtcacctgacgtttgtgctttgattaaacaggatgacgatgatgagatc accttcaaggcggctagtgcacacagtccagcattccaaagcccgcaagctaccgctatatctgatacaccgtgctcagc ctatatcccgtctgattactcgccgttaacagaagcagaagagcagaatccaagagaccttctaaatgtctttttagcag caagagacattagtcccattagattccaacttgccacaccatggcatgaagccgcagaaagaactaagcgacgccatgct cgtaaagcaaagcaagttgtctttgcagctttagaagaaattgcacctgggagccccgaaatgctgttaaattcattgca gtcatcagctgaagaagacgagggcgttgatacatcactgatagacgcccttgttgaatgcttcaataatgcaagtcact ggagcgtaagaaggcagattttgtcgatcatggccgacaaagtatcattttcagcactgaagaagctgattcccggtctc actagataccggttcaatgtcgcccgtcaccacacgttactgcatggacgaggctctccagataccatcaccaagggcgc acgaatacgcatctccatggagaaacttgaccactttttgtctttcatcacaagtggtcaagtcattcaagatctgccat tcggagaaaggacattgaagttatctggtaacacagaggtcacgatcccgaatgttgtgcgcacactcattcctcaacac gtggtccagcaataccagggctattgtctagaaaccggatttgatcctatgagttgaagcagcctatgtagagtcttgaa agtatgcagtgcttccgtgagaaagtcactccaaggacttgactatttttctgcagagggtgccaaagcctttgatgacg tggaggaggtagtagagaagctgggtgatgaatttgggagaggacacacttgggcaaagaacctaacgattaaactgaaa acggcgaaacgttacttgaaaagtgacttcaaggtatgtagaacagtcgtttaccttttgaatcgttcagtatgcaccaa gttatcgttacaacccgacacatgccgcaaagtttgcatgaggctttactctatcacctagctgtcggttagcagattaa aacactgaaagacaagtgcgctctgcggctagattgctttttctagtaacagcaaagttttaactataccaaagatgcgg tcaattttgcccattgacatcattgatgtgcaagctaaagacaatggtgcaaactttatcgtgttaaataaattaagttt attaccaagaagggattatatacaaagggaaactcactgatataagcctttttgtcatgtggtttgtcacgttatgtcta gtgtgacatgccatatatggatattcgcgtcttttttccattgtgtaatttttgtgcattgatcaagaatataatatatt tgcttcgaagtaaacacctgttttctgagacttatcctttgacatcattctctgtttgtactcaggcgagtgctatgtgg gagttgcacagttgagcgtagccacgatgtaagatcagagcgtttacactcgaatattgcttgactcgcgctataaattt tcatgtcccaactagtatcaaagagtttgcgagcggttgcccttgattatcaaaatattaacatctatttcctggggtat ttcaggtgcatgtgtcaacaagctcacgtgtccccgaccactgcaggccctttgcactcagccataaaagtgatgaagac tttacaactgagtgtgatcacctccatgatctaagatgcgacaggtgcgacctcattccttctgtgtttgatgaagtaga attggctttgaacgattccggtttagctcttagcagcgaggacaagaaagaaatggaatacgtcatttgtgaatccaaga agaatattcaggcatggaaagctcacctacttcgtgccattaaccaagatgaagcgcggttaaacctgcttcaaggtctt aacccagcctcagtgctggtagttctagattgggccatgaagtttttgcctaggaaataccgtgaaagtcaatctgattg gtttgggaagagaggcatttcatggcacattgcagtggctatgaccaagcgagaaggtctgttagagatgatgacatttg ttcatgtcttccaaagctgttctcaggacagtcatacagtactggctataatcgacgatgttgtaggacaacttaaagct gagaggcctgaaatcaaccaagtttctcttcgtcaagacaacgccggatgctaccacaatgcattcaacctgctggctgt gaaagaactagcaaaaagataccaagtcgaatttagagtggattttcagacccccagggtggaaaagggtcatgtgaccg aaaagcggccacaatcaagaaccatgtgaaagcatacctgaactctggcagtgatgttgaaactgccagccaaatgaaga gggccatagaatcaggcactggtatcccgggtgtgagggtgatgctatgtgatccgcccacagtgccaaagtcagagcct ttcaaatgggatggtgttagtttcattaacaacatttcatacagcaacgatggcataagagtgtggcaagagtatgatat cggcaagggcaagttgttaaagtggagtgaatttaacctgcctaaagagattcccacgccccagattaaagtaatagaag atgccacttctcctaaagcgacattcagagaggtgaaagcgagaaagagaccagccgcagaacatttaagcagcgcgagt caagcagaaaaagctgatagctctagctctgataatgaagagactgctcaagaaactaaactgttccagtgcccagatga cggctgcgtcagatcgtttcagcgattttcgtcccttcagcgccaccttgacgttggaaagcacaaatatgttctggaac gtgaaacacttcttgacaaagcaatgctgtcatatgccaccaaacttgtccaaggcaatgtaggtctagaaaaccagcct cgtgacgaaccgggtacttctcgtatcttagaatataccgattccccgtctaaaggctgggcgctcaagtcatcggctgt acaaaggaaaaggtttaatgatagtcagaagcagtacctcactaagttattcgatgtgggagagcagactggccacaaag tcgatgctaataatgtgtctcaatctatgagaaaagcaaggaacattgacggttctcttatgttcgatgcaagcgaatac ttaacaggaaagcaaatcacaagttttttttctcgcctagcgaaaaaaagaagagcggtaagagtagacgattcagaaga agaggatgaagaggaagcaaagctacacgaagaatgcattgaagatctttcaagaaatattatcagcgaaattggtctag ttcatccgataatgtttgattcacacaacctatgcaatctggcctcgagctcaaagcttgcaaagttttctatgtcaatg ctgcaagacatatgcaacttgtatgaactggacacctcgtcaataattgcaaagaggaagaagccatacattgacttaat attagatttaattggtaattgctcatgtcaaaggtaactattacgtttttgagacatcgcgttttattcaatggcgtctc gcggaattgttaaccccgataactaccgttgttaaaaaacttccatttccgtccgtcattctaatagcgacaatgcaccg tttcggccatttcagtccattagtgtagcggggcagttccgtcacctgcagctcagtcagtgtagatcatccgaactgct gaggtcgtagattcaactccagcaagggagcattcagatctacgtccaagtatccgcgagacaccgttggaaaaaaaaaa aagatcatcccttcatgtcatctgcaggggttagcaatttcaatctcacccatttcttacctttttattacggttagttt cttacgattagtttctcagtttagtgttgctatgactttctcgctttcttccaaattttgatagtgttagtttaacatca aactaagtatatgttaaggtaaatcggctaagtttctatgtattaaaattctctctgactaaaggtggattcccactgtc gcgtaatttttacgcacgtaaagccagttaaagtttacatccgttcgtacgtagaaattacgcgacagtggaaatccacc ttaaggatctgcagcaaaaaaccaccgatgtcgtttctcagagtgtcaaaacactccattctcaccagggtttttcgact gtcagttgatggttacttatgccggacctactgtgccaaagagaaaactcaattcaaagttaacagttttgagctgaaaa gtaactctcaatttttaaatgaaaaaagagaatttttaatgtttgtatgtgaaccactagaatccccaaagtaaatagga cctggcatgatcgatgagcctgtcacgcgttgcattgaatttttataaccagtacagtaaccgcaaaatgcttgtctcgc gtttgtgaagtagtctcattttacgacagtaaaaactccttggccactctcaaactagagaagcctgcatgagggcgtaa ttttaacgaaatggtggtaaatgaaatattttcaaaacttttataccgtaataatacgcaagcacaaaatgaaggtctgg gtccgtgcacaattcgaagtccttatttttttccgaaagcaatttcttctgtgggaagagggcgggtaggaatattgtga gaatcgaataaaagctcacataacactgatttactactctgcttctttgttccctcagaagataaaaaacaatcccatgt cgcttttccgtgtcacgtgacttcgtgactctctgactcatcgcggtgaaagggataccgttctcagctgcgagcaaagt ttgcaatcacatagattttgaatacatttgtaatattatgaggttgtcagaaaaagttagagccttctttgaccgtaata aaggaaagccaacattgttaagtgaacgctaggacaaggacacagttaatagtcatcggaagtgtaccaactgttggccg acattaatacaagcatttatggaacttgtggtaaaattggaggttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnttacatctggacaaagtttgagcaaaatcgatttttgagctgtggccaactcttgttcgatttttgtagacatccac tcttaaagcgtatttcgttaggatcctatttattatttctttttgactgttattatattattacattatctctttttatt ctagaattattcatatgttactgcgcaattaactatcttttaatttaagcaattgatgnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnctgcaatagtattcagtgttgtgatggtaaccttgatattccctcctttttttgctttta cacgatgattacgcgaaaatagtgatgctatcaatcaataaaatatccgaaatttttcggcttatattataacagtattt tatttcatttaggtattccggttctcaggttggctaaatatctagatattaataacatggtaatataacatgacaaaaga tggctaaattatgtatgggtacattagacagtgtagtgtgcagcacgtagaagaaatcaagagcagaaaataggagtcag taagaaggaacaaatttaccaaatgaggaaattctactgaaatctgtgaataagatagaggaccacaagtacttaaggat tttggtatgtcataccatgagggaaccctcccaaaacaagaagaaggtaaagagaacttgttagaagcgcaaggaattct gtaaggtcaaaattgaatgcagagaatggcacataagatatgggccagggatcactcgaatactcgaaggacaagcaaag cgtattaaactggaaggcaagggatatattgacaatataaaggtcaatgaactggacggacgacgggcataaattatttc agaaacgactcataaacgctgaccaccttcattgccaaggccaagtttggcacatggagtcaaggaagtgtcgattaacc acgcctaccggagcagatttcttaagtaaagaactttctcttataaatagggagcctatgcaaccacgaggaaaccggcg atattaatttcatctctagcagtaataatagtaacgaaagggacattgatgtgaaatggcctgttcctgcagttgtgtgg acaacgggatcacttgaagacaaaattccattcttttcttcttatccgaactgctcaggaaattttattgcaggagagtt gattgcagatcgaaacgtcattttacattttcaaatgaatttctcgctgtcgtctatatcttccttggttaaggaaggaa agtctggaacttcacaactttcatcaggtgaatatgatcagctaaattaataatttctgttaatcccctcaacgtagctg actgcgctagaagcattttttagtgaaagaaacttctctgaaagatggccaggaaaggaaagaaccaatgggcattcact tgtcagtttagagtgttagatacaaacacatatgtaccagaagcctaacaccacgtcgaggctcgaagcattgcaccatc cttctgttgttgttaaaaacatcttacttatatgttagtgaaaataaagatggctgtgttactgatgttggcaatcagct ttttgaattgatccaccaaaagaacaactggtggccacgctcgcaacaggttaggggcccattcaaaggctattgttcga tggtgatgaggccaagtatgagctctgggaaacaaaacgttttcagcgatcgtgtcgcagcgcgacgagaaagatgacaa catgaagtttcaagaatctaaggtcgcacctaggagttacgaggagaccgataaatcgtgttcgccacctcaagctgacg aggacaacgttatgaactgcaaatcgaaaagcccagcggcagatggctccataacgtgatattcctgcggtcagccggga cacaagtcatcagaaggtccatcgaaggacaggaagaagaagaagaaagggagcagatggtgtagccactgcaagttgaa aacacacaataccaacgtttgccggaagaaagactcagcgaaaaccgtgagtgatgataaaagggatgcttcatttgctt taaagtgactgtagataattttgattcggctagagaaaactctttgctagttgacactggagctactgctcatattctta atgacaagtctaagtttctgaaatttgacgaagatttcaaactggtgactcactatatagaattagcagatggtagtagg gcagagaaaaaattatcctgcatgatgtagaaggcgttgcccatgaagtttttcttgaaggtgctttgtttatacctagc tatagacagaatattttttctgttcaatcagcaagggaagtgccataaaattgacaccaaattcagcggaactgagtgca tcagatggcacaaaacttgccataaagaaacacgcaaagctgtattatctcaacagcacaatttctagcagtggagcaca caccgctgagacatggcacagaatactagggcattgcaatatgaatgatgtgttcaaactagagggtgtagttaaaggga tgaagataacga |
Protein
Protein ID | aug_v2a.17915.t1 |
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Definition | - |
>aug_v2a.17915.t1 MERKMSPDVCALIKQDDDDEITFKAASAHSPAFQSPQATAISDTPCSAYIPSDYSPLTEAEEQNPRDLLNVFLAARDISP IRFQLATPWHEAAERTKRRHARKAKQVVFAALEEIAPGSPEMLLNSLQSSAEEDEGVDTSLIDALVECFNNASHWSVRRQ ILSIMADKVSFSALKKLIPGLTRYRFNVARHHTLLHGRGSPDTITKGARIRISMEKLDHFLSFITSGQVIQDLPFGERTL KLSEGAKAFDDVEEVVEKLGDEFGRGHTWAKNLTIKLKTAKRYLKSDFKVHVSTSSRVPDHCRPFALSHKSDEDFTTECD HLHDLRCDRCDLIPSVFDEVELALNDSGLALSSEDKKEMEYVICESKKNIQAWKAHLLRAINQDEARLNLLQGLNPASVL VVLDWAMKFLPRKYRESQSDWFGKRGISWHIAVAMTKREGLLEMMTFVHVFQSCSQDSHTVLAIIDDVGGKGSCDRKAAT IKNHVKAYLNSGSDVETASQMKRAIESGTGIPGVRVMLCDPPTVPKSEPFKWDGVSFINNISYSNDGIRVWQEYDIGKGK LLKWSEFNLPKEIPTPQIKVIEDATSPKATFREVKARKRPAAEHLSSASQAEKADSSSSDNEETAQETKLFQCPDDGCVR SFQRFSSLQRHLDVGKHKYVLERETLLDKAMLSYATKLVQGNVGLENQPRDEPGTSRILEYTDSPSKGWALKSSAVQRKR FNDSQKQYLTKLFDVGEQTGHKVDANNVSQSMRKARNIDGSLMFDASEYLTGKQITSFFSRLAKKRRAVRVDDSEEEDEE EAKLHEECIEDLSRNIISEIGLVHPIMFDSHNLCNLASSSKLAKFSMSMLQDICNLYELDTSSIIAKRKKPYIDLILDLI GNCSCQSKGSAIKLTPNSAELSASDGTKLAIKKHAKLYYLNSTISSSGAHTAETWHRILGHCNMNDVFKLEGVVKGMKIT |