Gene
Gene Model ID | aug_v2a.19172 |
---|---|
Locus | scaf11134 : 81173 ... 88357 : + |
To GenomeBrowser | scaf11134:81173..88357 |
Genes list of scaffold | scaf11134 |
Manual annotation
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.19172.t1 | gi|501958502|ref|WP_012677220.1| | cell surface protein [Streptococcus equi] | 1.0e-21 |
aug_v2a.19172.t1 | gi|675416110|ref|XP_008921289.1| | PREDICTED: macrophage receptor MARCO [Manacus vitellinus] | 2.0e-21 |
aug_v2a.19172.t1 | gi|677969290|ref|XP_009070377.1| | PREDICTED: macrophage receptor MARCO [Acanthisitta chloris] | 3.0e-21 |
Transcript
Transcript ID | aug_v2a.19172.t1 |
---|---|
Definition | - |
>aug_v2a.19172.t1 gacaatgaaagcattctcctcaatcggtcagcgcggctttggcatcataacaaaaaacaaaattgccgtttagagtttcc atgtaaaacaacctcgcgcaaaaaatgaaccaacatgaacatacacgtggacggcgctttgcaaaaaacttcggcatcgc catggctgcattgtacatagcactgaccacagcttttatggtgactttgtatcgcgtagtagctttgcagacagttcgaa tacaatctctggagacagtcactggcgaactgaaagctcgtgttcaagtgttggaaaacagttccacagctccgataagt caacaggcatcggtgggtgaaacagaggaaaagtctaaactccataaaaacaaggttcgttcttttcaaaactaaacaat catattgttttgaactagggataaatcttagatctgctacatgtgtgagtaagtcataataatcacgatatgcgcatttc atttccagcttgtacttgccaatgcactggcacaagacagaaagaaaaggcagacgggttgcaaaggtataaaatctatt gttactcagtctacttgacctaatgaaaatgaaatgaaggctaatgacaaatctatctttaaaggaactgcttttaagta ttttgttccgcgatttcagtatttagctaattatccaaagccacaaatatgacatgaactctttaaagtaaagaggaatg gttaacggtcctttgaattgccgatggtttcatgcgattgatgcaagatgtccgatcagcctaaaaacaataatgatggg caaacttccaaaaataactgatttgcaataatgattatgacaacaagactccagacaaaggtaaggattaaaacgaggaa aaaaatctgatactttgcattccaggaaacaaaaaggaaattgagggaaaccaatcaggaggatgttttgtccctcccca tcaataaacttttagtttgtttacttccgtgttggtgccgttagttgtgactttcagtggacgaattgattaaactaaca ataacatggctgagggcaaagtaaaagtagaaacaacaccttaggaagtgtttattttggtcaggattcactgatgccag tatttaatcagatcagattcaccggccggtaatgttgactttatattcatgacctcgaagccaattactatttccgagtc acggcattttggtcatgttttgatacaatcgccaaaacaagcgcaacactcattgaagtgtcccacgatgcaaacatact gattctctttgatctaaaactcgaaaggcttaaaactttagctgccgcaggctttcaaagcaaaatcaagataaacgaaa ctcgcttcattcgtctccctaagggatcttttgttgcttcaaatttctggttgttttgacaatttgtgattttcctccct ccattctcccatcatcttgcattagttatcaaattcttcataatccgagacttctgcttattttttcatatctttgctgt cttgaagcaaaaccaatgttattttgcagccatcgatatggttttattagttcaggtcacaataggtacttttccggcca tcgagtttaaggttcgctatataacctaatatttagtcccattctacaagaactctttcatcgtttggagtgaattgttg acaacaacatgattgatcgtggtaaacaagtcttcatagtgactgccaaacaaatcacttgttttgacttgaccatcagg aaagttacagaggagctctaaaattaattttttatacataccggaaataagcatacttgaagttgaaaacgtatgtggcg aactgaactacggagatggttttatatttgcccacgagacaagcgtgagtgaacacaagcctaaagtgcaatgaaatata aatcgattctgatccgatgatcactgctaacttaacacaaagtcatgtaacaccctttttgattttatgaaaaggtgata gatgtttcaagagaaaactaaaatgctgaaaagtctttgagacaaatattgttgatccaaaatgcagccaggcgtaatga gtaaaagcttaacaaaaggtgttgtacaatatggcccgatatttgctttaaaactaaacaaaggatatttgaattcaatg tagacagtgtaaaataatatgaatgtatgattaaccgagatgaccttggcatgacaaaagcttcaaaattgaaaacttac tactttttgcctgaccagaaaaaaagacgtacacgtcatgaaagaaacaatcaacaaaacctctcaacatattaaagcac tttacacaatagatcagtattgtaagtgaaagttgacatcacgtgataaatgcatgacagtttaagtggcttgtgttata aatgtcaaaacgtggacaggacttgtgggacagttgcttcgacggcaaaaaaaattcactaaagttggaagataaacaaa agttactgttttcattgttttcatttcttgggtaaataagctcttgcttgccactgacgacttattactgcatactattt tttttttgcagtgcacagaaagtgcaggagaggaaaaagaggtaaattttctctttgtaaattagcgcctccaatttttg aaatggacgtgaatggcgaaattttactggttactacagtgaaaggttttcataacaaaacaagaacctggtcaattcca aagaaaagtcaacatagtgctgtttaaaaagttagcgtttagaaaggagtagttgcattttgtaatgatgagcaatccag ttgaaaaaacaaactacaaatagcacttatgcttcaggtcacaaaggcgatcaaggtcccaaaggagaacaaggcccaaa aggtgaccctggcatggagggatccaaaggggccccaggaccgatgggacctaaaggagagccgggagagccaggtcagt agttcatgtaattctacatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtccctacaacccacgtttaaatataacggcggcataaaaaga aaaggttaagctagtcaaaagagatttgccaaagaacgaaaacctacctacgtttcttggaccctgtcttcatctgtctt catgttagtagtacacacagctttatctgacgatgcttcaaacaatgcacctctgttcagtgaaagtttcgtagctcctt actacaagagagaatggctaataaacataacatgaaacaaaatgcacactttggtgacaaacatttgaaacaaacgcata gtttgaagttatttacttgacgttccggcagatacaatttctttgtaattagtacgttactcatgttacacacaaacatt caagttttgtaattagcggtctcttctgaagatgtatttttaatccttcgaaacgtcaagtgcataacttcaaactattt gcttccaacgtttgtcaccacaatgtgcttttatataaaataacgtgaattttggaacatgcaacccttcgctagaatgc aatcatttgacgcaactgcaaggccggtgaactcaagtacggctgcccatttgagcagttttctgggactgtggtgggct gaaattatatctggggtccagtgtcctagctttcacctgctctaaattacttttcggttcgtccacaggtaaagctgggc cgcaagggaaccaaggaatcaaaggcgatccaggtttagccggaccacggggattcaaaggggaaccagggcaaggactg aaaggagaaagaggtattcaaggacccaaaggcgatcgaggtttagagggcgttataggtgcaacaggagctcctggtca taaaggaaaccctggtgtagatggtcctaaaggagacacaggtattgaaaattgtcttctgaatcttccagcaggttatt catggtagttgtgtcatctatcgaacgagattacttatctggtcgatcggtggcattgttcacagccaaaaaaacgtgga gaataatcgatgggtatctaaggacgaggctttaatatcatggtccacttttcaaagtaaaccacccgtgcgttatttgt tattctggtgtaaatcttttaattagctttgtccaaactccgaccaaacaagaaatctatttaaaattgatgccaatttg gaatgtttcattcaaataccgaaaaaacggtcataaaaaaatttcagatttacgcatgtaaccatttcagatgcaaaaaa gtagtttaactatgaccttgaacattcagcatctttctgccataacaagtgcttactcaagtttaagctgaaaatgttgc tgtcggttgatttgttaacaggtgcaattggattgaaaggcgagagaggtcttaacgggtcaaaaggagaaaaaggttag aaggattagtaagtttcctcacgagtaaaaaaaaatggtgcccactaagtttgcccggggaaagatttactgtctttgaa caaccgagaagaacgaaacagaagatgtaaaaacgaatgggtcagcctgccaagcgacaaggtggcgttttctgtgttca taaccccagctttcgacatttcgaccgaatgcatacgataaggcatgagcaactaaaacattgaaatatcccgtcccatt tctgtggaagcgccttattcgatgactannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnntattcattacgtagtgtattcttttctagaattgggaattcatagaattatggtttcctttccagggtcccaacgg ataactcactggcgcttggggcacaaagaaggcagtattgtgtaccgcagctcaactggacgcgtagaggtcaagaggac tgggtactactacatatacagtcaaatgtattactctgatggtagtaccgcacaaatgggtcactttacattcatcaata acgacaaggtcctggaaagcatgggtagtgttgtgagcagcgtcaggaaatacaacaccaagtaccacggcggtgttttc ctcctacacgaaaccgacaccatctcgattggaatcccgtacaccaagacttactacatgaacagtgagggaagcttttt cggagcatttttgctccaccccatgtgatctgatgagtaaagtatgccccattctttcgacagcgagactttcaacaccg acttaacataagaacacagtcaccaaggttcgctttaaatgaatccattaaggagtcttgtaaaatgcctctgttcaatc ttttcgtaaaactgacttagatttagctccctcagggagagatagaagaaggtatccagttggttggcctgtggtcatga tactgcccgatgtgtgcctcttgccagttcccgttggcatcacagtcgaacatcatcgaatcagccagtgatgctagata cattgcgcactggaacagctgttattttcggcgttgctacgttcttccgcttcttgcgcggccctaacgtttctctcttc agtttccaggcgcacagttaacaactggcaagtacggcacaaatcaggcagccttatatacagtgatgggaaagtgcata taaaaacagctggatactactatgtctattctcagatgtattacaatgacgacagagcatttcaaatggaacatcagttg aatataaacagacggacatttatgcaaagtagaagtgctgttgatggttctcctgctaccggaggcagtgggtaccatcc aggatacaaaaccaattacaacggcggagtagtgtttttaaacacatctgattacatatctgtgcgaactccattttcaa ggttttattccatgaaggctgagtacagctattttggagcatttctcattcatcccgcgtgaatttcattcagtctacct ttaactaaaaacagccattagaagactccatccacagagcttcttttaaatacttgtgcaatgacatgacatggagccga gttaccgagataaaatcaattccacgtattggatcaaaatcgatcaggggtatcaacattggagcagatttccttgaagc gtctccataaaaccgaataattgctctaatcaaacaaatcaaacagaaactcggtatgaaattgctgcgaaattagaaga atctctttggaatccaaagattgtaatttatcattgatgatcatcagatgtaaatattttgatatgaactgatttttttt aaatgtgcaatatttaaaacaccactaaggcttgtagtttaatagataagaaaatcgcatgctga |
Protein
Protein ID | aug_v2a.19172.t1 |
---|---|
Definition | - |
>aug_v2a.19172.t1 MNQHEHTRGRRFAKNFGIAMAALYIALTTAFMVTLYRVVALQTVRIQSLETVTGELKARVQVLENSSTAPISQQASVGET EEKSKLHKNKLVLANALAQDRKKRQTGCKVHRKCRRGKRGHKGDQGPKGEQGPKGDPGMEGSKGAPGPMGPKGEPGEPGK AGPQGNQGIKGDPGLAGPRGFKGEPGQGLKGERGIQGPKGDRGLEGVIGATGAPGHKGNPGVDGPKGDTGAIGLKGERGL NGSKGEKGSQRITHWRLGHKEGSIVYRSSTGRVEVKRTGYYYIYSQMYYSDGSTAQMGHFTFINNDKVLESMGSVVSSVR KYNTKYHGGVFLLHETDTISIGIPYTKTYYMNSEGSFFGAFLLHPMRTVNNWQVRHKSGSLIYSDGKVHIKTAGYYYVYS QMYYNDDRAFQMEHQLNINRRTFMQSRSAVDGSPATGGSGYHPGYKTNYNGGVVFLNTSDYISVRTPFSRFYSMKAEYSY FGAFLIHPA* |