Gene
Gene Model ID | aug_v2a.19290 |
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Locus | scaf11292 : 2419 ... 9562 : - |
To GenomeBrowser | scaf11292:2419..9562 |
Genes list of scaffold | scaf11292 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 20-7 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 20-1. This gene model contains Rapsyn_N, TPR_4, TPR_1, TPR_2 and DUF2977 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.19290.t1 | gi|704326372|ref|XP_010170742.1| | PREDICTED: tetratricopeptide repeat protein 28, partial [Caprimulgus carolinensis] | 0.0 |
Transcript
Transcript ID | aug_v2a.19290.t1 |
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Definition | - |
>aug_v2a.19290.t1 agatggtgaggcagcttcattcagttgataggagcaccatagatgagcaaggttggttgtaacactctcaggattgaagt atcatgaatttcaacagcagtgtttgtgtcgaaagaagtgaatgaactctaacataactgatggggaaactagtagtagt cttagattatcaaagtgcgttcgacggtcagtcaaggaatgaaataaaatgacgcgccatctgtttcatacacaccactt tgcagatttttcattttctgattcgtagcttgcaatgatagttcgaataaattaatacatttttacttaccgtagagaaa actgctaaaaggagaaaaaatcttagaaacaattccagaaaattgtgtgatcgccaggaagaaaaagcagatagaataag atttcctaggctaggtgtacacgataccagacgaattttcgacgatttgaaaaaaataacctgacatgttcgtacggaac tgtccaatgtttacgttgtgcccacatggaccgaacataccaaggggtgaatttgatcacgtcaaataattcagttggtc gcaggcctttcgcgtcgacaaagtttctgttgtggccacttgcagggtggtctgttgaacatttcaatataaggaagtaa acagatcagaaactccacctctttctctcttcattaagctttttttccatgtgccattcaaccattcctttaccctacga aaattcatttggtcaaggtgttcacactgtgcggttcaaattataaaccgtaaagactaaaaatcggtccccgattttgg cgttcaaatttgaaattcaaaacgtaggatgagtacattcatttacctattttttgtggttgcattgttagggctgcttg cgactagatctgcttaatatatgcatgtgcaaaaaaacaaacaaacaagcaaaagcagaaaaaaaaggaaaataggaaat ttcaactaaggcaagttcgtcggttcgcctcatactggccacggccctgcatcttgtaccgtgtaaacgaagcctgaatg ctgaaagcccgaatgctaggcaaggaaccaatacaattctagggccaagaaaagtaatgacatgaggttatttgcgccaa aacaagatggtttaaatcgaatgacaagatgatcgatacccgcggtatatcgtaaaaccagcggaaaaattagctgaata gacttccttcaattttcataactattgaaagaatttaataaactgactactttagttatagtagcgcacctgcttatgtt caaaacaagccagtcaaaaggagaaaggatcaaatgtgcaaaaagtcccttttgaattgtgctctctgaattaatcggaa tcatacctagacatcattgcaaaacaatatgatttgagaaccttaactatttccccccttctaaaggtttcatttttttt atagggaagcaagttgtctctcgtacagcatctcaagaccagcattccttcataaagtatagaggtgtgagaaacttggg tttaagcaaaccagttctgtttcggagatgtacagaatgttgatccctcaaatccgctgaaatttgattaaggtcaacat ttatgtacagaaatgcacgtaatcaattgcaatttcatgctcaattttgataaaagtcaggatgtgtccgctacgtctaa gagtcaaccacctcgtcataacttaacgagttcgaaaactttaaaatttactcataaaatttcgaactatacatgctcct aatgccttcacttttctcacatattttgaagacttccaagcattcagactgtgtgaaacactttaagaaaaatatcttct acaatacagtgtaaagccttcgttacttaatccctctgtacacgttgttttgaatgtgaaagtaacacccaaatttagcc gccaaaaatgcatcttggtatgttccaaaaaaaaaagaagttaaacttcatgaaagaacggctacttcatttgcaagaac tgaaatttcagctctagaaattaaaaccatgacgtgtaatgaagtgttaacaggagccctttggacgccctttgtgacaa ccctttgagtgttatatcaggctatgcaaacacgggagaacaattttctattgcttttataaaaactgcaacgcgggaaa agataaaaaaaatccttttactggtcaaaacgtatcttcctacaacattaatttgacaatgacattctcaactggacaat gaaaacttcaaaatctggtgatgccgtgttgacaactcacgcatctttacgttacacaaccatgttaacatactttcatg caaccacgcctctcggccaatgggagcgcgcgttgttagttattttataaactatattgtaaatgtatattttgcttaag cgtttcacagtcttgaaggcttggatgtcttcgaattatgtgaggaaaataaaaataaacaggagtttttacgcgctctt ggtgattctttgaaattgtttatattatttatattttcttccgaattttctaaattttctaaatttgtccaaacgtaaag cgcctagggatttcttaatatcattccttcaaacagtgatatgaaaggattgtttgggtggcatcagctaaaattcaatt tttcgaaattgatttgagacccttgatcttttgttacattggctgcactcaacctgaaattttcacggggaaattgatta caaataccgtctttcctaaggaacgtgaacggtcacgttttcgtggaaattcaacgcgtagcttctcaacccgagtttca agggaccaaagtacgagaggacaaaatgtgtaaaaaaatatataccctgttttgagacatcaatttttggtctctataaa ggttgtttacttttaattctgtgaggtacatcagctgattattgcttatgcagtgcgtggtatcttgtatagggggctga gtctagctgcttcggttatttaaaaatgatgttgagttgggctatgaaacactctgcctgaggctgagtttgggaattct agtgcaaaatatatcaaaactaatatatatttcagcgcctaagtgaagcatacatttgtgagtgcctcctggtgatctca tcagaccaatatcttcacgccactgttcaaccaattgcgtatgtaagaggcatacattctgccctgaaatccatgtctta cagattatcattaactcacaaaattattaatgcctagttggctattaaaacgtacttcttctcttctccggttttcttac attatacattttctctatgtgcgaatttgtctgcttgttcttgaaacctgacaattccttttaatttgtattttccagat gacgtaagcgccattgctgtttcaaaaaattgcccttgtaacgacaagaaaggtgtatcatattattatgtgtatcatta tttacgataacagtaaaaatgacaatcacaatatttttaaagtttatgatagtaacataacagcgatatttggtagattt tttttttctgtttgctatttgcaaattctagaaagcaccatgatggggaacaagaaaacgacaacaattttaactaaatt aaaataagtaagaagaaagcaacattaattaagatgcatttcaaatgcaggggaaattcgtgtattatcatcataaaggt ggttgataggttttaaatgcataatgtaaacactagtcatgagtccaaaaacggatcccggaatcttaactgcttccatt ggcacacaggaattgttctctgctggacagttaagttgaaaaggataaaaaaaaaatgaaatcagttgacacagctgctc tagcaaatgctcctatacctgctacgtgtgcaatccccttgccttttactaattttttcatcatttacnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnngaaattgttgatcaagatggaaatgctacagtctacgtcagtcacggaacatatct acaatcaaagggtgaccatccaaaagcactccatcagcaacttgaaagacgattaaaaattggaacagaaatcgctgacc gggacggaaaagaggaagcctatggaaatcttaataacgcgtaccagtcacttaatgactatcgagaaatcatcgagtat cacgacaaatatttaaaaaaggctatacaaatcaatgatcggaccggagaaggagaagcctatagaaatcttggcattgc ttaccagtcactcggtgactatcgaaaagcatttgaatatcatgaaaaatacttgaaaattgcattagaaatcggtgatc gggctgcagaaggcaaagcctacggaaatattggcattgcttaccagtcagtgggtgactatcgaaaagccattgcgtgt catgaaaaagatttgaaaattgcattacaagtcagtgatcgggccggagaagcgagaccctatggaaatctcggcattgc ttatcagtcactgggtgactatcgaaaagccattaactatcacaaaaaagacttaaaaattgcattagatatcagtagtc gggctggagaaggaaaaggctatggaaatctcggcattgcttaccagtcactgggtgagtaccgaaaagccactgagtgt cttgagaaacatttgaaaattgccaatgaaatcggcgatcggggcgaagaaggaaaagcctatggaaatctcggcactgc ttaccagtcactgggtgactatcgaaaagccattgagtgtcatgaaaaacatttaaaaactgcattagacattggtgata aggccggagaagggagagcctatgcaaatctcggcattgtttaccagtcactgggtgactatcaaaaagccaccgagggt cacgaaaaatctttaaaaatcgccaaagaaatcggtgatcgggctggagaaggaaaagcctatggaaatctcggcattgc ttcccagtcacacggtgagtatccaaaagccatggagtaccatgaaaaagatttgaaaattgcattagaaatcggtgata gggccggagaagggagatcctatgcaaatctcggtattgcttaccagtcactgggtcactatcaaaaagccactgagtgt cataagaaacattggaaaattgcattagaaaacggtgatcggtgcggagaaggaaaagcctatggaaatctcggtattgc ttaccagtcgctgggtgactatcaaaaagccattgagtatcatgaaaaacatttgaaaattgcaatagaaattggtaatc aggccggagaaggacgagcccatggaaatctcggcaatgcttaccagtcactgggtgactatcaaaaagccactgatatc atgaaaaacgcttgaaaattgctaaagaaatcggtgatcgggccggagaaggacgagcctttggaaatctcggcaatgct taccagtcattgggtgactatcgaaaagccactgagtgtcatgaaaaagatttgaaaattgccaaagaaatcggtgctcg ggctggagaaggaaaagcctatggaaatctcgggattgcttaccaatcgctgggtgactatgcaaaagccattgagtacc aagaacaacgtttaaaaattgccagagaaatcgatgaccggggaggaggaggaaaaggttacggaagcctcggcattgtc taccagtcactgggggactatcgaaaagccattaagtatcatgaaaaagatttgaaaattgcattagaaatcggtgattg cactggagaaggaagagcctatggaaatctcggcattgcttaccagtcactgggtgtctatcaaaaagccactctgtgtc atgaaaagcatctgaaaattgcattagaaatcagagatcgggccggagaagggagagcctatgcaaatctcggcattgct taccagtcaatgggtgactatcaagaagccactgagtgtcatgaaaaacatttgaaaattgccaaagaaatcggtgatcg aggcggagaaggaaaagcgtatggaaatctcggcattgcttcccagtcactgggtgactgtcggaaagccactgagtgtc atgaaaaggatttgaaaattgctgtagaagtcggtgatagggccggagaagggagagcctatgcaaatctcggcattgcc taccagtcactgggtgactatcgaaaagccaccgagggtcatgaaaaacatttgaaaattgccatcgaaaccggtgatcg ggctggagaaggaaaagcctatggaaatctcggtattgcttacaagtcgctgggtgattatccaaaagccactgagtgtc atgaaaaagatttgaaaattgccacagaaatcggtgatcgggccggtgaggggagagcctatggaaatctcggcattgct taccagtcaattggcgactatcaaaaaaccattgagtttcaagaaaaacagttaaaaattgcgaaagaaatcggtgatcg ggccggagaaggaaaagcctttggaaatcttggtatcgcttaccagtcactgggtgactatccaaaagccattgagtatc atgaaaaagatttgaaaattgcattagaaatcggtgatcgggcaggaggaggaaaagcctatggaagtctcggcattgct taccagttactgggggactatcgaaaagccattaaatatcatgaaaaagatttgaaaattgcattagaaatcggtgatcg cacgggagaagggagagcctatgcaaatgtcggcattgcttatcagtcactgggtgactatcaaaaagccattgactttc atgaaaaacatttgaaaattgccatagagatcggtgatcgggccggaggaggaaaagcccatgcaaatctcgccactgct taccagtcactgggtgactatcgaagagccactgagtattatgaaaaagatttgaaaattgccatagaaatcggtgatcg ggccggagaaggaaaagcctgttgttgtcgtctttgactgggttctccgacataattagagaacgctggttaaaatagaa ggtttattaaattccagtacacaaaaccacacgtcgagatcgctctttgtcaacccgacgccagtgaaatacacgtcaac cgtttcttgtgttcttctaaaaaa |
Protein
Protein ID | aug_v2a.19290.t1 |
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Definition | - |
>aug_v2a.19290.t1 MVRQLHSVDRSTIDEQGKQVVSRTASQDQHSFIKYRDDVSAIAVSKNCPCNDKKDGNATVYVSHGTYLQSKGDHPKALHQ QLERRLKIGTEIADRDGKEEAYGNLNNAYQSLNDYREIIEYHDKYLKKAIQINDRTGEGEAYRNLGIAYQSLGDYRKAFE YHEKYLKIALEIGDRAAEGKAYGNIGIAYQSVGDYRKAIACHEKDLKIALQVSDRAGEARPYGNLGIAYQSLGDYRKAIN YHKKDLKIALDISSRAGEGKGYGNLGIAYQSLGEYRKATECLEKHLKIANEIGDRGEEGKAYGNLGTAYQSLGDYRKAIE CHEKHLKTALDIGDKAGEGRAYANLGIVYQSLGDYQKATEGHEKSLKIAKEIGDRAGEGKAYGNLGIASQSHGEYPKAME YHEKDLKIALEIGDRAGEGRSYANLGIAYQSLGHYQKATECHKKHWKIALENGDRCGEGKAYGNLGIAYQSLGDYQKAIE YHEKHLKIAIEIGNQAGEGRAHGNLGNAYQSLATECHEKDLKIAKEIGARAGEGKAYGNLGIAYQSLGDYAKAIEYQEQR LKIAREIDDRGGGGKGYGSLGIVYQSLGDYRKAIKYHEKDLKIALEIGDCTGEGRAYGNLGIAYQSLGVYQKATLCHEKH LKIALEIRDRAGEGRAYANLGIAYQSMGDYQEATECHEKHLKIAKEIGDRGGEGKAYGNLGIASQSLGDCRKATECHEKD LKIAVEVGDRAGEGRAYANLGIAYQSLGDYRKATEGHEKHLKIAIETGDRAGEGKAYGNLGIAYKSLGDYPKATECHEKD LKIATEIGDRAGEGRAYGNLGIAYQSIGDYQKTIEFQEKQLKIAKEIGDRAGEGKAFGNLGIAYQSLGDYPKAIEYHEKD LKIALEIGDRAGGGKAYGSLGIAYQLLGDYRKAIKYHEKDLKIALEIGDRTGEGRAYANVGIAYQSLGDYQKAIDFHEKH LKIAIEIGDRAGGGKAHANLATAYQSLGDYRRATEYYEKDLKIAIEIGDRAGEGKACCCRL* |