Gene
Gene Model ID | aug_v2a.19873 |
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Locus | scaf11992 : 90 ... 4735 : - |
To GenomeBrowser | scaf11992:90..4735 |
Genes list of scaffold | scaf11992 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-PF20-2 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. This protein has a WD repeat. See chlamydomonas PF20 (AAB41727). This protein is a component of radial spoke and/or central pair. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.19873.t1 | gi|156363206|ref|XP_001625937.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.19873.t1 | gi|291226306|ref|XP_002733134.1| | PREDICTED: sperm-associated antigen 16 protein-like, partial [Saccoglossus kowalevskii] | 0.0 |
aug_v2a.19873.t1 | gi|390338607|ref|XP_795557.3| | PREDICTED: sperm-associated antigen 16 protein [Strongylocentrotus purpuratus] | 0.0 |
aug_v2a.19873.t1 | gi|676458931|ref|XP_009055136.1| | hypothetical protein LOTGIDRAFT_189601 [Lottia gigantea] | 0.0 |
aug_v2a.19873.t1 | gi|524875486|ref|XP_005094470.1| | PREDICTED: LOW QUALITY PROTEIN: sperm-associated antigen 16 protein-like [Aplysia californica] | 0.0 |
Transcript
Transcript ID | aug_v2a.19873.t1 |
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Definition | - |
>aug_v2a.19873.t1 taaaatccttttgtccaatcagagacaagtaattttgttgtctgcatgataaataaattgtcactgattcaaatctctgt tgacaacaaagatgacaggactacaaacagcacctcaccaagttgctgcaatcccagcagatattacgcaaggtttgtca tcttgatataataatatgttttcatctcaaaatttgggcttaatttgagaggacgtatcacacttacatatataagaatg ttgtgtgaagttactttatttgacattgatagtttcctctagttatgggctctggtgttaaagaggggcaatgatgggcc agtaagcatgtccctctgtcagcactccatgatcattaaaaattacagctccatcgattaaagacagagttcttcaaagc agacactagacacacgatgtatcaaattgaaaactgctagctcaaaagtttgtgcattaaacaactgaattacaccggct cctttaaactgtaaaaagggagtgattgagtgggaaagctagtaagaaagataggaagannnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatgtgagaagaagctattttccttcc acttccttgagtctcttttctatctattctccagtgcaataaccccaggggatgcaaatttaattcacataaatatttta tggtgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnntgagtttcctgttgatagtcgggtgaaccctcaactttctcatcacaaaggcccctcagcccac ttgactcgatcaggtggcttccggttgactcatactgtcagtgcgcatgccttaccagtcagcgggtaagaacaggacgc gattgttcaaaagccgattaacggtaatcccagattaaaagttaaccaaggggttcatttctcttctccaaggtgttgtt caaagttgatgttcagcaaaactttacagtagaagaagcggtcaattttgaaacacaaaaataacgaaaagaaactttcg cgaaaaagttgaaaatatgaaataaaagtttacactaatcctggattaagttaatcggcttttggaacaaccaggccctg gcgttttgagtgacagctgtcaatcaaagtgtctcacgcgggaaatacgaattcttcccctcgcccaaaccccgaaaaaa aatactgggcatagtttgagaaagaagtatcgcccttccttacccaccttagtagctgcttgagaatatggagcctacag gacgccttgacagcggtcgatcacttggcaatagaaatgtcgcgaataggggaacatcacgctttccttccttgccaagc agtgcgtctctcgaaaagacctagtaacaaaactctgcattataaatgtttataacactgtttagaaattccgttacttg atggaatctcatcacccgggtgaatgaagaccttagaaggactgtttttgttcagtaacgcttcgacaagcagaggggag gtgatctttagagtcaaatacagataaactggaagttaactttctccttctctgaaacccggacggtcaaattccttcaa gctaaaccgctgcgtcatgattcttttgctttgtcttgtcgtttgctttctttaccaacagcagagcaaaactgtttcag ctggcatagttgtgtattttcactcactcataatttttttcttatttccaccagactggctctgcatccaaggaaacaag tcttggctactgtcagtgatgattggagctggaagatgtgggcagttcctaggcaagtagtacaaagaaatctttttagg ccagctgtgttctacagaaaccaagcccaggctttttctccgaggctttttgggttggagggcttttgtgacctcagtgt tctttgataaaacagagttttgctggtttgattgatcaagtttttcaatcagattccaacttggttaaaattcttgaaag tgacaaggtgtttagggtacgctgtcgttttcgcgggcttttctaaactggtggagcactggcgaagtctgcaaatttgc ttgagaccggttggtcacggctgttgactgctggaaaattgggcatcaaaggaatcgaggagggtcaaatttccaccgca agaagatttcaaactggagctgacgttttgagcgttagattttcagcaatcgctctgacgaagggctgacgctataaacg tcaacttcgttaacatcttacaccatagagcggttttcaagtgactgtcgaaaaaccaaaaccaaagcaatttctctgac taatcacaacacgaacaaacagcgccgtgaaccaatcacagttcatagcaattacctgtaactcgctcaaagcgcgggaa aagtcacgcgtacctggtgcgattggttttggttttacttctcattggttgaaaaactggcgcgagtcttttaagctaat cactaagcttaggaatcgcaatcacgtaattgctttcgatagtcatttgaaaactgctctaatcaacttgtttgatacca caatttccttgtttcaccttcctactgacgcagtactacagtttccttagaaacttaccccgctctttttttttccgcat actgttgacaggaattagctttagctggcgtaatttgcacactagtcataaaactacaacatggcttcgttgtttttctg taaaattacaaatgtttttctccgctcattttgcagcggtgacatcatcatgacgggagaaggccacaaggactggttat cagactgcgattttcatcctgggtgcgcagatgaatttttgtctctagcttgctaggagactctctgggggactaggacc caccctacctagtccaccagagagccttttcgcagcaattttctccctttggagtatgttagatgtttcctcgaccttaa ttattcgagatatcttgtaaaatctgcctttcattattaataacattttgtagcacgttgctccaaaggtcggctgtcaa aatgtcgttttttttaagtgcaccataaagtaaatgttctttgccaccttgatgaagcttcccgcttcagtgacccgttt ctcgaaagtcccgaaaacttttcgggcccgaaaagccgttccttaaactccgactcgctcattctgtaaagctagtcttt tcatatgttgtaaaggggagaaaaatgaaaataactgcaaagtttcgtgccctgagacgccttcgttttgaaaatacaaa gagaactatgtcacccgaaatgcgcccgaaaagtttcgggtctttcgagaaacgggccccaggccgggttaacagacgta atggcctatttcaccacgaaagtgggtgtaattttccacacaatttatgcgaaatgttctacgtggaaaagtcatatgtg gcgtcgaatcaagaattaactcatacctatctttgctctgtctttgaacaaaatgagacctatttttacacactttacgg atcttgagtgtcagatttcggtcaaggggtggaaggtttgttgggtagaaggtttgttgggtagatttatcgtagtagta ccgagagaaatatttgaggctcgacgcagtttaaaactgacggccgagagagagtttaaaggaaattccaactcccaaga aaagaaaaaaaaatcaattataactcaccccttattgacaaagcgttgtgcatttaacagaggtgctcgtttggccactt catcgggagacgggactgtaaaaatctgggatttttcgaaagcagagtgtgtccttaccttcacggaccacacccatgcc gtgtggggatgctcgtggcactcttgtggagatttcctagcctcgtgttccatggacaacacatgcaaggtctgggatgt caacag |
Protein
Protein ID | aug_v2a.19873.t1 |
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Definition | - |
>aug_v2a.19873.t1 MTGLQTAPHQVAAIPADITQGPSAHLTRSGGFRLTHTVSAHALPVSGLALHPRKQVLATVSDDWSWKMWAVPSGDIIMTG EGHKDWLSDCDFHPGGARLATSSGDGTVKIWDFSKAECVLTFTDHTHAVWGCSWHSCGDFLASCSMDNTCKVWDVN |