Gene
Gene Model ID | aug_v2a.20021 |
---|---|
Locus | scaf12165 : 15735 ... 25425 : - |
To GenomeBrowser | scaf12165:15735..25425 |
Genes list of scaffold | scaf12165 |
Manual annotation
Study field | IP3 pathway |
---|---|
Gene name | Adi-TSC2-1 |
Description | Named thus because a bi-directional best his result was obtained by BLASTP searches. See Homo sapiens TSC2 (P49815). |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
---|---|
low quality protein: tuberin-like | GO:0051056 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.20021.t1 | gi|260801581|ref|XP_002595674.1| | hypothetical protein BRAFLDRAFT_64808 [Branchiostoma floridae] | 0.0 |
aug_v2a.20021.t1 | gi|390333168|ref|XP_003723653.1| | 0.0 | |
aug_v2a.20021.t1 | gi|751231658|ref|XP_011169404.1| | PREDICTED: tuberin [Solenopsis invicta] | 0.0 |
aug_v2a.20021.t1 | gi|380029021|ref|XP_003698181.1| | PREDICTED: LOW QUALITY PROTEIN: tuberin [Apis florea] | 0.0 |
Transcript
Transcript ID | aug_v2a.20021.t1 |
---|---|
Definition | - |
>aug_v2a.20021.t1 ccgacgggggctgaggggttattattgttcaaaatggccgctgattttccctgaactgcttctatcaaatatttaattga aaaaaacgtgtctgtggtgaaggttatgtcaaagcagaacgttagcgagggcttccgtcagaaggtgaagcagttttttg gtgttaagaaaggcaatgttattactagcagtgtttatgagggtcccaaaccagacgagttttacttccatcaagaactt ctccaggtgagttgattttagtttgttctttgcttggtgaggctgtatgcacataggcagtgtacaattaaggacttgga agcctctatattcaagttgtactcaaaattctcgcgttcttcgggaatggaaggtccaaagtctgcactggaaattttat agcttcataatccgccttcccctgacttccttatatttcgaaaccagttcgcgcgcggtcaaaaaactatagggagccac cttaaggctagggagtggagcaaagtcttaaaaaattaagaaagttccaagtggtttttatctgggcaatttggcaaccg taagggagactggcagattgattctgtattcaggagactcctggataatcggggcgagttgctacaaatgctaagattag cctattggaccatacatgtgtgtttacctgcaaacttttctttaacaaaaaaagagaaagttatcattacagaaaacttt gcagaaattaagttagagtctgtggaatactgtatttacacgaataagcgccgtggggcttatttaatttttcacgccac aagtgtggcacttattcaagggaggcgcttatttaaacattgtaccagacaaatttactttttctatatttttattcaac ggcatactttctatctgttaattttcctatggactgatactatactgatagtaagagagagaacaccacatttacagcag ttaaactcatcaccaacagatgagcttgggcattggtgcctacgaggtttgtggagttgggcaatgttctagcatgaaga ggtctccatggcaaccctgggagcggcccccaccaggcaccgtcacaccgaacaattcagtggaatacttacgggcccac aagttacctagcccctacctcaagagggagggagggatgggaaaaaccaaagtagaaaatgacaggcaaacagcaagcta ttacaatagcactttgcaaagaactgcaagcaagcaactgcgtatatcgacacgaggtgcccctgctagaggcatcgggc cacccctggtataactggggaaaactgcagaccaccatttcttcgaggttaactttgtgttaattacatttagccacatt taaactgtatctgttgacaaaaccacttatccaaaaaagaaaaaatccttctaacaccagtctccttggctgacaggaaa tcagcaaggaaagtcctctatccaatagggtgaaagttttaagggaactttgtgatttcctggcaagtcggcgggtggag gatgtaagtatcctgtcattttcatttgatacaaagtgtcaggtacttaatgacaaaaaactaacattttaccatcaaag tttgctcttctttctctgctgtacattttgtcgtatgaacttaaggtgttagatggtacgtatatctagtgaaagaactg taaaaaagttacaacaaggcctagtgataataaaagttgcacccaagaaataataggctatcagagcattaagtttgtag ttagaataatttgtattacctcttgcaatttcatacagataaaaaaatcatttatttatcaagctttcctgaattttata gcatgccattgaagctgcatgggaagccgttaatgatctccttgaagccagcaatcccgtagaagcacgacatgttactc ttcagtttcttacagttatggtctttgcacaggttagatgatacagcccttatccagcaatgttgtttggttgattcctg acatgcagattgtcaataaaataacttctgtctcctcttacagctaggtagacttggcatattaagagctcattttttct ccgttgtggcgggccacaaagttgctgaagatgtctcacccaggtgaattggactgaaatattaacacagcctcttctta ctcttactattgtccaggaagtagctgtgataacttgtactcataatattattattatatcttctgtaggttggaattgt tgaaggctcttagtgataatggaaaggatatttcttattttgaagaagtgactggtaaagagatggttgtaatagcattt gacattaacaataaattttatcatactctgaagtatgtacaggttgatagcttatagaacgtgcagcttcaaactcatgg tttagtcttagtttataacacaggcttaatttaagctagctggcaagtgtaaatggagcaatgtccataatgtaattctt ttattattttgaattacctcagtggtcaagccaagttttcttggtgacattttgtaagatacagtatgacttgcggtcaa gaaatgaaaagaagtgtacattgaatatcattgtggattgctgctgcatttggggactgttgatatctttgttgatttat tattcattggcagttaaaggcaaatactcagacaaaaataattattgcagctgacctctcctaccatttgtgataactac ttcaccaccatggcattgtgtaacaaatgcagccatttctcaggagtgacataagtctttattgattttgtttttctctt ttacaggaccttttctattatcatggatgcctgaagttatgaagggagggaggtttgttttaaaagattatgttgccata aatttactgtaataaattcaagattaaaaagaaattatagaaaacaaatgctttattgtgggagtacactttgtgtgaat acctctttacaaagcgacatttggagcatggatcactaaagacaaagagaggaatttggaactgtatgcaattccaacac cctcactactgtatcatgtggctccctccaaaaattgctgttaaatgatgaaatttccaggaagatgctcatttaattaa aaggtttgattgagttctctacatgtgattggtgagggcagttgtgctttttgtgtgcaaatttgcaaagctactggtct agtctgaagaactgtaataagtctttccttttcctttttctttattctttattctttgctagaatggatgttttcatgcc tcttgtgatcaatgtgattcattacaattctagttttttggatgaagatatcataactggcatcgtgaggtgagccctaa aaaaacattgttcacagtgtgacttgtacactgaaagctcttttactgcacatatgcactctcataaggcaatagctcta tagtgccacaaacaatggcagctgttatagtgtcacgctctctctctgccagagcagtacacctttgcaaaaatgttgaa aaatgttctacctaatacttgctggaaagagatgcaaaatataatgtaaaagaaaaaaaattcagagtattaattagttg tttaagttcaaacaatttgggtggatcagcacactgaagacagaactcatagtttaagttaacattacattgtgttttaa cttaactaagttaggttagaaaggtgtttttgctctggaattcagagctttttttttggcccattaaagttagtggtgaa ggtttaaatgactttttcataaatatatttttgttttactgtgtcactttgataggtgtccaatacagctgcacaataat gtattgaaattcaagccactttgcatgagcagcacagcatgccatatggcatccccttgagcctaagaaagttaattgat tctattttgctatggttctcttcataatgggcaagttgagcaatcatgtggcacaaaattgccaaactggagagaaagtg atgggctgggacattttaaacaaagaaaattcaaatttgttggctttgtttaacatgtcccagggtgtcattttctcccc attttggcgattttgtatcatgtgatcgctcaggagcaaaaggcccacttgtgtctggtagataaggtaagatgtgcatg tgatgtatcaagaatctcattatgttgctgtattggacaacttcacaactatgtagagagcttatgtttacagggggtcc atttctcagtgccctgccctcagtaaaccccctcattaaaaaaatgttctcacctaattgtcagggagacctgtaatgtt acaagaacaaccaaagaagaagaggacatagaggtaattgcaacagagaataatataattattactcagtattatttggt ttgaactcttacaaaaaatattgataaaaaccactgacagcaaaaaaagtaatagggttagtgagcagtccagaaaaggc aatttgaggatgttttatgctgtattcactttgctgttttaattttcatgtaatactatgttacataccttttaaaagcc tgaatggaagtcttgtcaaatgttgggagggtacatcattagtaggttccaataaattctgctgtcacctgattacaatt tggttgccacagaggtaatgtccattgtttgtcagctgtcaggccggctgtgaggactttttaacaagattgtgccacca atttttttatgccatgtttggtagcaatcagatttcaactgttactctctttcatggtcaattcccctgcaatgtatgtt tctgtgggagcatcctacaagttcctgccatcattctctgatcacaaattaattttgtactgcactcttttgcagctctg cttgtgcctgttggatgctgtagttcgttacagctgtctgccatccaatgccttgtttgactttattgctatagcttgta gagctgtgaacatagaaaagttttgtcaacacagttggaaggtaacagaggcagagcttcatctgaactacaagcgatca gtttttccatttttttcattagcttctctctggcggcaagtgaacaaggaaaccttttgtcctctggttgataaaaaaaa ttaagggaaaaaagctgcagctacaaacagtttgcacatgggtttgcctaaannnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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agtgactataataacagaaacagctgttgatctttgaattgaccctgcttctattcatcttacaggtttactctccaggt gaaaattccttgatagaaaatctccacattttgtttaccagcattgaggaactttttgagacgaacaaatttaatggacc agaagaaaggttctttgctttgattgagaaaagcgcaagtaagagacctgtaagtgcaactcacccctctaccttgattg gtatacttagccctcccccatcatcattcagccctctccacttgtgtgctagattagacagaacggaataaggtaactga gagtaagtatctggaagaaacacactctcttgccttgcccttatatctctattttttttttgtcaggagcattctcttca tgtcctggtgtcatttaaggctcagacggtccatcctgctcaagaaggctggctcaccaatcttcataatctcatggaga agtattttaggtaccaatgcatgttttacaataactgcagaatcctcgcgcgctcattggctaatttttattgtcaataa gcggacaaacacatgaaatttataatatatgctatattgacgcaacgagcgagagcagaaaatttgaagaagtcgatcta tcactttttaaccaatagaaagcgtccgttatttctattagccaataagagagcgaggagaattatgaatttggtcgcgt cagattgaataaactttgaagtttctcgcgcatttttgtctcgcgttttgacttaattttgtcccctctacctttctgtt attgtaaaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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gaacaggttaagcccatgcgactttcctctgtgttggacatgtatgttagcttaagctttttcgtggaagtaatatagat tatcttattac |
Protein
Protein ID | aug_v2a.20021.t1 |
---|---|
Definition | - |
>aug_v2a.20021.t1 MSKQNVSEGFRQKVKQFFGVKKGNVITSSVYEGPKPDEFYFHQELLQEISKESPLSNRVKVLRELCDFLASRRVEDHAIE AAWEAVNDLLEASNPVEARHVTLQFLTVMVFAQLGRLGILRAHFFSVVAGHKVAEDVSPRLELLKALSDNGKDISYFEEV TGPFLLSWMPEVMKGGRMDVFMPLVINVIHYNSSFLDEDIITGIVRETCNVTRTTKEEEDIELCLCLLDAVVRYSCLPSN ALFDFIAIACRAVNIEKFCQHSWKVYSPGENSLIENLHILFTSIEELFETNKFNGPEERFFALIEKSASKRPEHSLHVLV SFKAQTVHPAQEGWLTNLHNLMEKYFSVKIFSPS* |