Gene
Gene Model ID | aug_v2a.20096 |
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Locus | scaf12260 : 2 ... 1753 : + |
To GenomeBrowser | scaf12260:2..1753 |
Genes list of scaffold | scaf12260 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 39-6 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains NACHT domain. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.20096.t1 | gi|470323653|ref|XP_004349548.1| | hypothetical protein CAOG_02795 [Capsaspora owczarzaki ATCC 30864] | 2.0e-33 |
aug_v2a.20096.t1 | gi|470296989|ref|XP_004345490.1| | NOD3 protein [Capsaspora owczarzaki ATCC 30864] | 4.0e-33 |
aug_v2a.20096.t1 | gi|754351633|ref|XP_004343873.2| | hypothetical protein CAOG_07149 [Capsaspora owczarzaki ATCC 30864] | 1.0e-32 |
aug_v2a.20096.t1 | gi|470319339|ref|XP_004348754.1| | hypothetical protein CAOG_02004 [Capsaspora owczarzaki ATCC 30864] | 6.0e-32 |
aug_v2a.20096.t1 | gi|470296575|ref|XP_004345402.1| | hypothetical protein CAOG_05812 [Capsaspora owczarzaki ATCC 30864] | 7.0e-32 |
Transcript
Transcript ID | aug_v2a.20096.t1 |
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Definition | - |
>aug_v2a.20096.t1 ctagtaacctttgggacgctattaaagatcaaattctgccaaaaagaattgaaccggaggcaagaaaaatgttttttcaa ttcttgaaagaaaatccgtccaaggtgttgcttgtgctcgatgggttagatgaggcagacccacaagaactcgaaatgta cttggaacttgttcaaaagaaggagcttcctggctgttacattgttctcacatctcgccaggaaggagggagtagagtga ggcggtacaccgatacattgttagagattgtgggattcacaccgactgatgcggagagttacattagaaagtattttaaa caagacaaagcacacttggcagaggaacttatttcaaaatttccgttgcatacggaatttagggaactaacgcgaaaccc gttaaacactcttctgctatgtgttatctgtgaggatttcaagggagttctaccaaacagcaagacgcagctttacatgg agatcgttctctttatattgagacgttatgaaagcaaggaaggcttatcaaatagaggtaaagaccttttattagtgtac aagaaggaactgatgatcctaggaagaactgcgctagattctctgcgtaaacaagagctgtatttcgatgaccacaaagg ggatatcaaggaaagtttgttgatgaagtttgggtttctctcgatccagtctggtgttagcaagagagctccttgtgacc gttatgggttttttcacaagagtttccaagaattcttttctggttacttccttgccatttctattattgatgatgtttcg aactttcagtcattgctgacggatcctcgatacatggatgaactatttcaagtttttaagttcatgagtacaataatagc caaggaatccgtagaaactgcagtgtcagttgtaaaacgtattgctttaattttaaatgagacaggctatatatctgatg aacgctattggtacttaaatgttgctctttgctttattaccgaatgcaaaactttttcaggagaccttgacacaaaactt gctcgtgcctttggcgaaagtctagaggtggttcacgtggttttgttcccgtctctgagcctgtggtgtagtgggacgtt tttcaaggctctcgccgttaattccaccgtgacaaacttagaggcacacttagaggtaccgaagggcactttaagtactg aggatatcaatctgcttgccgaggccctcagagtaaacacctctctttcttctttggatttgcattctaattccattcat gttgagggcgcaaattcacttgctcaggccctcagagaaaacacctctctttctactttgtatttgtctaacaactacat tgttgatgagggagcaaattcacttgctcaggccctcagagtaaacacctctctttcctctttggatttgtgttctactt ccattggtgataagggagcaaattcacttgctcaggccctcagagtgaatacctctctttcttctttggatttgcgttct aatgccattggtgatgaaggagcaaattcacttgctcaggccctcagagtaaatacctctctttcgtctctgtttatgtc taacaattcggttcgttttgatggaggacattcacttgctttggactgcagggtagacacctctttctttttgaatttgt gggacaactaaattggtgacgagggagcaaattcacttgatcaggattaagaaataaatcccattcgttctt |
Protein
Protein ID | aug_v2a.20096.t1 |
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Definition | - |
>aug_v2a.20096.t1 MFFQFLKENPSKVLLVLDGLDEADPQELEMYLELVQKKELPGCYIVLTSRQEGGSRVRRYTDTLLEIVGFTPTDAESYIR KYFKQDKAHLAEELISKFPLHTEFRELTRNPLNTLLLCVICEDFKGVLPNSKTQLYMEIVLFILRRYESKEGLSNRGKDL LLVYKKELMILGRTALDSLRKQELYFDDHKGDIKESLLMKFGFLSIQSGVSKRAPCDRYGFFHKSFQEFFSGYFLAISII DDVSNFQSLLTDPRYMDELFQVFKFMSTIIAKESVETAVSVVKRIALILNETGYISDERYWYLNVALCFITECKTFSGDL DTKLARAFGESLEVVHVVLFPSLSLWCSGTFFKALAVNSTVTNLEAHLEVPKGTLSTEDINLLAEALRVNTSLSSLDLHS NSIHVEGANSLAQALRENTSLSTLYLSNNYIVDEGANSLAQALRVNTSLSSLDLCSTSIGDKGANSLAQALRVNTSLSSL DLRSNAIGDEGANSLAQALRVNTSLSSLFMSNNSVRFDGGHSLALDCRVDTSFFLNLWDN* |