Gene
Gene Model ID | aug_v2a.20238 |
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Locus | scaf12428 : 98802 ... 105157 : - |
To GenomeBrowser | scaf12428:98802..105157 |
Genes list of scaffold | scaf12428 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 39-54 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains Glycos_transf_1 and NACHT domains. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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nod3 protein | GO:0009987 GO:0016772 GO:0032550 GO:0032555 GO:0035639 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.20238.t1 | gi|470293066|ref|XP_004343800.1| | hypothetical protein CAOG_07076 [Capsaspora owczarzaki ATCC 30864] | 0.0 |
aug_v2a.20238.t1 | gi|470301273|ref|XP_004347306.1| | hypothetical protein CAOG_04559 [Capsaspora owczarzaki ATCC 30864] | 0.0 |
aug_v2a.20238.t1 | gi|754343459|ref|XP_004349727.2| | hypothetical protein CAOG_01221 [Capsaspora owczarzaki ATCC 30864] | 0.0 |
Transcript
Transcript ID | aug_v2a.20238.t1 |
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Definition | - |
>aug_v2a.20238.t1 ggagcttctacacttttgctgaaggtgccctttcactctttgtggtttactaattgacatcgcttcctcatggcatcgtg tgcaaggcaacctcaagaacatgatagaaccattaaagtcaccattttggcctctgagtggggatccagtaagggtggac tttccaccataaacagagagttggccattcagttggccaaatttgctgatgttgaagtcactttctttttgccaaaatgc tgtgaaaagaacaagagagaagcgctaagccatggcatattcattgttgaggcagagaggctagtagggtaccatgaaga actggattggctcagctttccaccggagaatttgcagatagatgtggtggttggtcatggtgtgaaacttggtcgccagg ctcaagttatccgcaaatctcacaaatgcaagtgggttcaagtggtacacaccgacccagagaaactaggaatgtacaaa tgttatgagaatccaatctcaaagggagaacaaaagcacagtgctgaggtagaactatgccagatgtctgatttggttgt tgcagttggacccaagttagcagaagcctttcgcaagtaccttcgctggtgtagaaaagatcaaaatgtttctgagttca ctcctggtgtttttgctgatttttccagtgttgaacaagctcttgatgaaaggaaagaccacagtgttttgatctttggg cgtggagatgatgaagattttaagctaaaggggtttgatattgcagcaaggtctgttactgcatcacctgacacacatct ggtgtttgtgggagcacctgaaggaaaacactctgatgtcacaaaacgtttgcttgattccggaatttctgaaagatctc ttactgtgaggggctttaaggatcgagaagctctgatgcgagaattctgtgaggcagatctcgtgctaatgccatctaga actgaagggtttggcttgacagctctggaagcaatgtcagctggacttcctgtactcgtcagcaagaactcagggtttgg agaagctctgggccgtgtaccatttggctcttcatttgtgattgactctgaagatccaagtgcatggacagcagccatca agggcacctgggacaaagacagacggacacggcttgatgagatcaaggctctgcgtgacgcctatggaaagagatacagt tggtcagaacagtgcaaaaatcttcttgatcagatggtgagcctacttgcgaatagacaaggtatttagtgtgaaatgat atatgaagtatttcatataattatgaaggtatttagtctttataataagtaattgttgttgtaaatgttttacataatta ttagcaattcccaggaagggagaggcaggtgtggcttaattgggtgaccagtcacttcttttttttatatgtttataatt acactgattttaaattgatttttggaaaagaactttcaaaataccagtaaacagcagtgcattttaaattgtattagcac ttggagctgcctcattgtttattctttatttttctgtcatttatactagcaatcaagagtcttattgtaaagatcaactc nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctaatccatcctcttcatcaatttgggaattttgtaaacatgcca ttcatgaaaagcagttttaagaattgattgatattcatgacttctatgctgtctttggttatgatagctagaatagttta ggtgctgtttgaaaaaccagaaggcgcatattatcaggtttaaaaacccgagccgaggccgagagttttacacctgataa tacatgagtttttttgaacggcttcaaaagcatgtattcagatgcgtgcatttagggaattagtgtactagaattccggg ggtgcaccgtgcgtatgtcgtgtgagagaaagttcagagaaactgctaatgaagaaaaagctttgttggaaaaatccaaa atcaacacgatatggcacaaagtggttttgttataaattgtttgcacattcagccctgcactgtcgtggaactgaaacca aatctgccaccaggctattcacaggtataaaatgttctcatacacgtgatcgattggcgcgtgtgataggctcagaaatt attccaatattttgaatgtaatataagattaaatcgaatgaatttaccatgtcaaaatgatgttagtgaataactcagat attaaatgtgataggctaatatgctcataaattattcatgtattttgaatggaagtgaaggttaagtcagatgaatctac catgtcaaaataaacaacatgcttacgtaacagtcatccctctctctctcctcttctttttttgtaagaatacatgcaag atgctcgagggttgaatgacagtatcattgatcaaacttttgtggaaaaagagttgaataactcggatatcattcagact ggttatcgaaaatgattaagggaaaacttaacataaagacagtcagtagaattgactcaaatctagtgtaaatttttgtt tattgtatcattcttagttaaatcattgatatcatttttaatttcttttgactgtaactttgcaatttaccgtgatttat ttcaatagatgcttttggcgggagtcagatctcagtccaggaaggtgtggagaggagaagcacatccattgaagacagga caggtgaaagctgtttatttcaaacgattcgtatagttgttgcttgaatattattgatgtgaaaatagctcattcaattg ttttattggactgtacatccgtgaagtactggttaatgaaaggacttgatttcaaaatgagtttgatttacacttaggac acgagaatcatatagtgtgtataataacgggaacctacatctgcccttaccagaaatgagtgattagtgaacattataac ttatttaatcatacaaattaatacaaattacaatttcctcaattgtgattggtttaaaaaaaactcctatttccaactaa ttcagttgccaagtcgttatcggtgagttcgttatcggacagttcaacaaaccaatcacattcaaagttgtaattgaaat caaccaatcacaaccttggtttcaatcaccgtagaaacagtatacaaactcctaaattggggctttcctcaaaatggata acttttttgctattttttttctatttttcttttctcggaaattgtaatttttatgattaattggtaatggcacttcgtgt cgtccaattcagtctttaatcatactcgtgataaacaaatcggactcccgctacgcggtcgtccgattttgttatcactc gtatgattacagaccgaattggacttcactcagtcctatgaccattacttatcgcctgtatgggtctctgaaattagcct taaagttgcaagaaacgattttaaacgacaaaactgaatcttacagatgtcgtaagggagatgtcaaagacgagcagtga caaaaaggtgaaacgtgaggtggtttcggtctaaacctgataccccttgtgcttccggtaaacaatacttatattacctt gtgagctcggcttaagcaaatggtgattgattccctcctacaaaatctacagtttgtaacattttctctttttacgcggg gagttaaagttgcttagaggaaaaaaccctgctggggccattggtattgataactgatgtttttgttatcaacctacgcg acgatcccgccagctttcgtgactttttttctctcggaatgtttttctctggaatagtttatagaaatttccacattgga gccaaacgatcacgcaactcggtgaaattataattgcgaaaacgtggaccatttgttgaacttttggttagttatcttta ttcaagcgttatacttcactgtactctaagctttaattcttttcatttgtgcttcatagccgttaaacagggagtttttg gtcacgggttgccctagtaggatttcagtagccattggctactttaccttgtttgttacgcgatgtatcaaagataaaaa aagttaggttggatgtgttttcgccgctcaaaccttatgttacattttatccaggagatccaagccacatcataaagtgg atacaacaaatttacgagaagtgtgaaggggtgattttgccagttccttggtgtgacagatttagctttcagctcgagaa aattttcaccagacttaggatagttgcaaaagaaaagacacgcgaaaaagtgacaaaagaagtgacgagcatgtcaagta tctttaccccacacgaagattgccaacgaccaatggttgtgttgattgaaggtgagcctggcattggaaaaaccacctat tgccagaagctagcatatgattgggcaactagacatggtcgcgaatggcatgagtcttttccaagagttgaagtgcttct gctcctcagatgtcgtgacattgaatctaactgtatatggaaagcaattgtggatcaaattttacccgagggcattgaac cagaggtaagagaaacgtttatccagttcctccaagaaaatccttccaaggtgttgttggtgctcgatgggttagatgag gcagacccagaaaaactgaaactcttccgtaaactgattcaaggaaagttgctccctggatgttacgttgttcttacatc tcgccatgaagctggaactaacataaggccgtacaccgacactctgttggagattgtgggattcacgaccactgatgcgg aatgtttcataagaaagtactttcagcaatcagacaatcaactcttggcaacgacactcattgcaaaactggagtcagat gatttatatgaattaacaagaaaccctctaaatactctcctactctgtgttatctttgaggatcttaacggggttctgcc aaacagcagaacaaagctttacatagagattgtcctctttgttttgagacgttatgaaaacaagaacggattgtcaagta gtgataaagaccttctcttggtttataaagaggaactgatgatccttggcagaatggcgctagattctctgcgcaaagga gagctgtattttgaagaccatcaaggcaatttcaagcaaagcttattacctaaatttggctttctgtccatccaggctgg aggtggcaaaagagcaccttgtccccgttacgcattttttcacaagagttttcaagaattcttttccgcctttttccttg ccttttctattattgatggtacaatggactgcaagtcagtgactaattttgaatgcgaaggggaactaagtgaagtgttc acatttatggggggaatcgtagccatgcattcgaaggaaattgcagagacagttgttgaaagctttgtatcagttgttaa tttgtcaggccctataaaccctgaccgtcgtacacccctgagattggctttactcttcattgacgaatgcaagctttttt cagaaaccatgtacacaaaattagctctttcatttggcgagagtgttgatctcgtgggcttgactgattctggttggttc tttctgtccaagccatcactcagtacgctcttcttggctttaagagtaaacacttctcttacttctttgaatttgtctca ctgcttcattggtgatgagggagctaattccctatctgaggccttaaaagtaaacacctctcttacttctttggatttgt taagcaacttgattaaacacgaaggagctaagtccctgtctgaggccttaagagtaaacacctttcttacttccttgtat ttgacttacaaccctattggtgatgaaggagctaatttcctatctgaggccttaagagtcaacacgtctcttaccttttt gaatttgtcttatgactccattggtgatgagggagctaattccctatctgaggccttaaaagtaaacacctctcttactt tcttgaatttgtctaaaaactccattggtgacgagggagctcattccctatccgaggccttaaaagaaaacacctctctt actttcttggacttgcctgacaactacattggtgatgagggagctaattccctatctcaggccctaagagtaaacacctc tcttgcttccttgagtttgttaagaaactccattggtgacaagggagctcattccctatctgaggccttaaaagtaaaca ccactcttattgttgtgagttattgcatggtaagcaagttcaggttgttttgaatattgaaaaacttggaagaagtgact ttgagtaacatttgacgataaaaactagcgacagaa |
Protein
Protein ID | aug_v2a.20238.t1 |
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Definition | - |
>aug_v2a.20238.t1 MASCARQPQEHDRTIKVTILASEWGSSKGGLSTINRELAIQLAKFADVEVTFFLPKCCEKNKREALSHGIFIVEAERLVG YHEELDWLSFPPENLQIDVVVGHGVKLGRQAQVIRKSHKCKWVQVVHTDPEKLGMYKCYENPISKGEQKHSAEVELCQMS DLVVAVGPKLAEAFRKYLRWCRKDQNVSEFTPGVFADFSSVEQALDERKDHSVLIFGRGDDEDFKLKGFDIAARSVTASP DTHLVFVGAPEGKHSDVTKRLLDSGISERSLTVRGFKDREALMREFCEADLVLMPSRTEGFGLTALEAMSAGLPVLVSKN SGFGEALGRVPFGSSFVIDSEDPSAWTAAIKGTWDKDRRTRLDEIKALRDAYGKRYSWSEQCKNLLDQMVSLLANRQDAF GGSQISVQEGVERRSTSIEDRTGDPSHIIKWIQQIYEKCEGVILPVPWCDRFSFQLEKIFTRLRIVAKEKTREKVTKEVT SMSSIFTPHEDCQRPMVVLIEGEPGIGKTTYCQKLAYDWATRHGREWHESFPRVEVLLLLRCRDIESNCIWKAIVDQILP EGIEPEVRETFIQFLQENPSKVLLVLDGLDEADPEKLKLFRKLIQGKLLPGCYVVLTSRHEAGTNIRPYTDTLLEIVGFT TTDAECFIRKYFQQSDNQLLATTLIAKLESDDLYELTRNPLNTLLLCVIFEDLNGVLPNSRTKLYIEIVLFVLRRYENKN GLSSSDKDLLLVYKEELMILGRMALDSLRKGELYFEDHQGNFKQSLLPKFGFLSIQAGGGKRAPCPRYAFFHKSFQEFFS AFFLAFSIIDGTMDCKSVTNFECEGELSEVFTFMGGIVAMHSKEIAETVVESFVSVVNLSGPINPDRRTPLRLALLFIDE CKLFSETMYTKLALSFGESVDLVGLTDSGWFFLSKPSLSTLFLALRVNTSLTSLNLSHCFIGDEGANSLSEALKVNTSLT SLDLLSNLIKHEGAKSLSEALRVNTFLTSLYLTYNPIGDEGANFLSEALRVNTSLTFLNLSYDSIGDEGANSLSEALKVN TSLTFLNLSKNSIGDEGAHSLSEALKENTSLTFLDLPDNYIGDEGANSLSQALRVNTSLASLSLLRNSIGDKGAHSLSEA LKVNTTLIVVSYCMVSKFRLF* |