Gene
Gene Model ID | aug_v2a.20265 |
---|---|
Locus | scaf12464 : 4162 ... 9885 : + |
To GenomeBrowser | scaf12464:4162..9885 |
Genes list of scaffold | scaf12464 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
tnf receptor-associated factor 5 | GO:0005515 GO:0007165 GO:0044459 GO:0048522 GO:0051091 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.20265.t1 | gi|686600663|ref|XP_009276585.1| | PREDICTED: TNF receptor-associated factor 4 [Aptenodytes forsteri] | 3.0e-31 |
aug_v2a.20265.t1 | gi|524966030|ref|XP_005082918.1| | PREDICTED: LOW QUALITY PROTEIN: TNF receptor-associated factor 5 [Mesocricetus auratus] | 1.0e-27 |
aug_v2a.20265.t1 | gi|672027536|ref|XP_008762143.1| | PREDICTED: LOW QUALITY PROTEIN: TNF receptor-associated factor 5 isoform X1 [Rattus norvegicus] | 2.0e-25 |
aug_v2a.20265.t1 | gi|560952553|ref|XP_006198802.1| | PREDICTED: TNF receptor-associated factor 5 isoform X1 [Vicugna pacos] | 2.0e-24 |
Transcript
Transcript ID | aug_v2a.20265.t1 |
---|---|
Definition | - |
>aug_v2a.20265.t1 atttaaaaaattaagcttcagcaaaaataatagcacagaaagtcacacttgttacctctttgacaatgcaagtcatcaag gaaggtagtttatagtttctaatttaatccatgtattggcatattttttagtccattgtaaggtgagtgctgttgcagac aataaaaataaagtgtctgttgatgttggtggctaaaatgattgtcctctttgcagtttttagtgtgtgtgctggcaaaa tgaggaaattttgaagatgattaaccatttggcggatttcgaaagtttgatagattttgaagccttgaaaatggcaaaaa agataagttttttgggtcaattgtgtaaatcttgccttggcggccaaactgtaaatatttggcagtaaagtgaatgtgat tcttctttcaattaattattgttttcacttgaatttccatcaaattcttgcacctgtacattgcaaattatttgctgaaa aagctttttgctttgggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcagcagaagctcatca tgaaggctcctcctgctgattttttaggcatgtagcccatggcctgggttgattaacaggtgttttctttgcaaccgctg tggaaagaaactgacattttgtatcaataatattttttagaaaaaaaaaagctgtgccctttggatcgctcatctcttaa tccacggtctcggaccgtaagtagcgtatttggaaaaataaatgtaaagttgtgccattgttacttttttgtttgatggt aactcagagaatctgagttcatctaacacaagtcctcgaccttgtggactcctatttagtgaacacaagttttttccagg ttttccagatatgagagacatatagagttgccatccaataaacttgtctttacaatgtttgtgacttgtgggaagtttat gtttttcagaccaattaagctaagctacaaatttgaccttagtctatttatcttcaggacatttatttggacttagcaat tgaaagaacgattttggattttcatgtgaaatgtcctcatgacaaaaacggatgcaaatggacaggcgaagtcagatctg tagaagtgagtgatcttttctcttttgctatttcaaaatggaattttactcttttgcgttgagaaattcttgatgatgtt tatcatgatggttgaatttttttttcatcctactcagctgtaaatgattgactgacgaattcatgtttgtcctctcattt tcgtgttcttctttttgaccttggtagaaatgtcattttaaaatagaaacttactaaccgcgttttttctacttcaattt gctctcgggccatgaattgaagcggaaaaaacacaaggtgccaccacttatagtacggactgagaaaacgaggttagcaa aatgtttattatatctcttggaaattgaatcgaactgaaaagcacactactgaggcaagtccgtaccctaaaatacgggc cgctaaatcaaccaatcagagcgcacttagtacctgagagatataattattaaaattacgtacaatgatttgaaaaagtg aataaaagggaaatcactaatggctaaaactagatctaaggaacttctaaaaagtaaaaagggacgtggcttcttttatc aacatgtttaaatcatcattaacagttattattcgaggacgcgccggatatgagctgatatatataaccaacgaggccgt aggccgagttggttattatcagctcatatccggcaagtccgggaagaataactgttttagtaaattttcaagcaattctc ttgatttcttcgggtgaaacctcctcaagtcgtgacattttctttaccgacgacgccgcgaaacaattttttccgacctc caaaattttagcacaagaaattcgccatcagtttttccttatttggtcaaacttaacgataatggctcatatcatgggct tagggaaccaatcagaaagctggaaaatcattatcgtgagctaaaaatttactaaaaaagaatagcaactgaaatcgaaa tgtgactgtgttttcccagagttgacttagtattggatggatgaatatcgttcctttgtcttgtggactttcctttgtgt ctccaaatgcacccactctaccatttttaaaataactgattcattcggccgaaatgatgctaaagttataaacgccttgt tttaattttgccctttttctttcagaaacacgaagctcattgctgtttcattggtgtgaagtgcacaaacaagggttgta aagaaactccattgcaaaaagatcttcaagagcacttgaccaaagaatgccttatgcggagggaattgtgtcagtactgc aaaacaagcttcattttttgcaaaggaaaggtgaaaatgattattgatgaatttgcaaccgtccgagtaatggcgttttg tgtgaaattataatatattgattgatgccattagcaacgcacttgatgtggtaaattgtacaattgacccttgtttccaa taactcgaaagatcatgacgtccgaaacacacttctaaagaattaaatccagaaaaaagcaaacaaatagtagggaaaac aaaactgtaggtactcaccagatgacaaaaattaaaatacattagtggttgacctgacattgagcgtccaaatgagcatg taattatcaaaccggactttcgattcaactatactcggtaaatactgtggaaaaagggttaagttgcaatgatttccgaa attagttcccaagtatttaaattatcattaatctctcttgattcattacgtgggcatttcagtcaaaaatggcttttgga gctctggcaatgagtttcttttgctagttggcttatgtaactggacttgcaataacagtatcgagctggtttcacccctt aattaacgactgtttggatcaggcataaacaaaaagccatttaaacaaaaagccatgtttgtttcatggaaatgtggttc aattgatcattaaactaatgttaatattgatacattgaaaggccggtggcctcgaggaaatcagacatttatcactttac agttgtagttcatgtttgaaaatttggtgtggacgcctgcacctcaattatttacgaacctattttgacctgatgttgtg aaactcactgatgcaatgaaatttatattttcaaggaacatgttgacaaatgcgctaagtatccggtgccttgtactcag aagtgtggacaacccatcccacgtgatcaggtagaaccgtttctcgatctctgacttctcactctctagggaccgttcat ctttaatgaggggggatgggggggggctggtgagatttgggaagcaccccccccaaaaaaaaaacccctttctcaagatt tcattgttttaatgttctctattattcccctagttcacattattgtgctcactatgaagacaatatttacaacccctaca ctacagagagctgtttactgaaacacacagatcaaaagaaagagaagtaaatttcctgtatcgtagatatagctcgccct gggcgtttggcgtttgacgtttggcctaatattggcatcttccttatgtgaactgatgaatgcaagaatgacaacacttg agttctcttcttccccagagtcaatgttatcactgtcatcatactcatcattgtcactttcatccgtttcagtgctgtca acgcttgccctgtcaacattttgtgtcaatgtcctggcatctctcagtgttagttggccagctctgagaggactcttctg ctgcaaccatgaatgtcttacaatagcctttactttctcactcnnnnnnnnnnnnnnnnnnnnnnnnnctttctcactct tgctccgcttcaaatgcttcttcagcccgttttggttcaatcaagtacttgtctagttctggaacacgtagctttttaag cttcgttacatcttcgcatgtcagctcattccaaggataatcctcatatgatttatcttttgcctccctacttccctttg ccttttcttctcctccctattgccttttaaattcaagcacttcacttattaaaacattatgccatttcaaagttttacta acgcgtttcacgtgatctccccttttctcttacgttttttggatggcccccgtcgaaagccttttttttatcgcatccct ccccgcccaaatcccaccagctctttcaacctcatgaaaaatgagcggtcccttataacactctattttatgactgactc tcgtcgaatttgttgcatttatttccacttgttttaaaatgggtgagatcgttatatgtaaatacatacaaagaactttt gttgccgggtctcgcaaaaaatcgacccgtttcgttctttcgaattgcacggtgcaaaccattctcaagagtggtttctt taaatttcatgttgtttttagatgagcggccacataaaagaaacttgttcctgcaccttggttgaatgtgtatacacaca cgttggttgtagcgaagaggtaagttcatcattttttcaattaaacgtttttgaatcgggcaagaaacacattcaatgca ctgagaaaaatcggctattgattcatatgataaaagatgaagataacatttcaaaaatnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnngacgcagaggctgctttttgtattgtatgcagttcgcaaaatcaaggcagtacacttcccaac tttgttaagaaacagtttgaaaagcacttgtacctggaagtttctcttatttgaggcaatttcacttatttggcaaaggt tggatgaattgattgcatttgaagcttattgtaagtgtgccgtggatttttcttcaaaggttccccgaggagctctcgat caacacttgaaagaaaacacagagcttcacttgaaaatggcctgtgaaaaactgcgagagtttcaggacgtgttggaagg caacgtaggcaacgtgaaagaaattcaagccagcgtgatagaggctgacagaaggataagcgatctgtacggtacaatcc gacagagtaacatggtgctcgaagaattattacaaaatcgcgttggtttgttggataaagtcttaaatgatctacaaaga gaacagagggacatcaataacaagcaagatatattgcaatttgaagttgattcattaaatagtgaagtagaagaacttga agaacgtgcatcaaatttggaagatttacagcaagaggtcgccgccattaaaagacgtcagagtgatcattactggagat tagaatatcttactaaacgtgtaacgaatgaccgggcctggttggaagactctgtgaataacagattagacgatttgcaa gccggtgctcggtgccgcatggaaattaatacgtatttctttaccaaacaagaggatgatcttcagttgctaaagcatca agtgcgcgttatttttttttcagttatttttgttattctagttttaggttactacttagccacttctagaacgaagtgag tttggttttatgagagctcaaacttcgcataaatatacaggcatgaagagcttcaattttctctgtaggcagcagcactt tctgtcgtgggacagaaagtaccaaataataccaatattcgcgt |
Protein
Protein ID | aug_v2a.20265.t1 |
---|---|
Definition | - |
>aug_v2a.20265.t1 MQVIKEEKKKLCPLDRSSLNPRSRTDIYLDLAIERTILDFHVKCPHDKNGCKWTGEVRSVEKHEAHCCFIGVKCTNKGCK ETPLQKDLQEHLTKECLMRRELCQYCKTSFIFCKGKEHVDKCAKYPVPCTQKCGQPIPRDQMSGHIKETCSCTLVECVYT HVGCSEEVPRGALDQHLKENTELHLKMACEKLREFQDVLEGNVGNVKEIQASVIEADRRISDLYGTIRQSNMVLEELLQN RVGLLDKVLNDLQREQRDINNKQDILQFEVDSLNSEVEELEERASNLEDLQQEVAAIKRRQSDHYWRLEYLTKRVTNDRA WLEDSVNNRLDDLQAGARCRMEINTYFFTKQEDDLQLLKHQVRVIFFSVIFVILVLGYYLATSRTK* |