Gene
Gene Model ID | aug_v2a.20740 |
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Locus | scaf13070 : 3651 ... 10115 : - |
To GenomeBrowser | scaf13070:3651..10115 |
Genes list of scaffold | scaf13070 |
Manual annotation
Study field | Transcription Factor |
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Gene name | Adi-Orphan-HLH-i |
Description | Named thus based on molecular phylogenetic analyses (NJ and ML). |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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class a basic helix-loop-helix protein 15 | GO:0044763 GO:0046983 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.20740.t1 | gi|156406042|ref|XP_001641040.1| | predicted protein [Nematostella vectensis] | 7.0e-29 |
aug_v2a.20740.t1 | gi|449663817|ref|XP_004205814.1| | PREDICTED: uncharacterized protein LOC101241277, partial [Hydra vulgaris] | 5.0e-13 |
aug_v2a.20740.t1 | gi|504181657|ref|XP_004599337.1| | PREDICTED: class A basic helix-loop-helix protein 15 [Ochotona princeps] | 8.0e-13 |
aug_v2a.20740.t1 | gi|560976371|ref|XP_006210479.1| | PREDICTED: class A basic helix-loop-helix protein 15 [Vicugna pacos] | 2.0e-12 |
aug_v2a.20740.t1 | gi|511911260|ref|XP_004775016.1| | PREDICTED: class A basic helix-loop-helix protein 15 isoform X2 [Mustela putorius furo] | 4.0e-12 |
Transcript
Transcript ID | aug_v2a.20740.t1 |
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Definition | - |
>aug_v2a.20740.t1 aaaacctaaaagccagcgatttttcacgttttcatttcacaaacatcgacacagaggaggctttggattgtgaaatccga atttaggtcttaaaatccggatattcggatttccagtcggacacaaaatccgaaaaaggatttcgggatagattttgtta attgaaatctctgtcagataattgcagtcacatgacactacacgcgaaacctgacgctaagatgatgacttaacaaaatc tgtcgccaaatcccttttcggatcttgtgctcgattgcaaatccgaagatccggattttaagatctggatcgggatttcc cggtcgaaagcacccaaaaatgttcttcaatgcgtgccgcacgtgcaggacgattgtttttcctcattcaaccaatcatg cttatgattagtggcgtgttgttattaccgtggctgtcgtagtttctagaaatttccgtaacaacattcaacggcgattt ttgccgtagcactcctctccgattgacattttttgttttaagttgatgatcttcgaagttcgctaacgagaaatttcaag tattaattacattgcataaagacattattcttaatgtagtagatagcatttaaatgaattcaacgaaatatacaatattt actcaaatatttactttgcattgcactgaagagcgtacgcgtaaaattgtggaggtaattgctgtcagcatgaataaagc aattcaagaaatagttcttagtttacacgaatcaagttgacaagggccgaattagcatcgtagatacatttaaaaaaaac tcaggtttcgaccgttagccgtagagagaggaaaactttgggggtcggtaagaagagttcgatcctccactcttgtccct tctcgacgcagtcctgctttggttcttatcccttgagggggaacaggcggtgccaacgcccaaatttatgcagacttgcc tgaataactaggataaatcccaacaatgcccaaattctatttcaactcagcgttgatacgacagcaaaaattcgcaatcc ctttaaatgttctaccatttatttagtcttacgatacataggagtgttttttgacgattatgcgatttcatttatacgcc ttgataagttgaccattgcccgtaaaattcagtagaaaaatgaagaaaaatgaagttgaaccaaagacagaacgctgagc ttggagtcacaggttaacttacgtaacttacgtaattttacacaagtgatcgaataatgtcattaattaaaatccaactg tttcgggtaatcaacttaggacctgaaacgtttttaaggttttagctcacagataaagtttcacccttacaagaataaaa tcaccttatcggttcaaacgaagtattatgaaagctggagttgaacatgccacctgaggcttgtggttttgaaggcgcat atcacctagacgccatctctaataggaatatgaaggcaggtagatgttcaaaccatatacccgttatagcacccgctggt gtcttgcggcacagctcctagcgtttgtaaatttcgacaacgcattaataaaaagagcgcaatttaatcacattaacggt tagatatactaactcgattgaagttacaacccagtgacgtttttaaatattcgtgcatgttttctaagttcttttttttt ttcagaaatattgggcgttaaattaaaaaggaaaaaaaattctggtacctgttttatttgttttccgtcttagggcttct tcacgttttcatttctgactgagcaaaagaaaaaaaagaaaaatatcacaatttacctctatttctctccgacggagagt gtttagaaaaggcttgaattccttctgaagtaaaactactccagtcgaattttgaacgacatcatttgacttcaactccg tattgttgtaataatgacatgatcaattacaaaattgggagttattaacaacaaaacaaaagaaaacgagcttgcagtct aaaatggcagtgtttccacgttcgacacctttagctgctgagttctttttcatcgaaatcattgtaataagtctaaattg tttttcgtcagcgttctgaaccactgcagctttccttgttgtacgtgttgccaaaaagtcacgaaactgcattaggcctg gaagattaggcaaacacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcgtaactgaatcacttcct cgttttatccatattcacttgaaatcgtcaaaaagtcgtctaaacacgatgagaatgcctcgttaaataagaagttaatt gaaatttcgaccaaaaagaaagcctataaacgctattaaagtcccgttaatatataagtaaagttcttaaagattacttt gtattcaaacttctcctgtaattcacagtatgcttttcattgtgatatttgttctgagcagatcattcaggctttccaac agtgcactattgacaatacacaaaactgcttgaaaaactgtcaccttaagttcattgaaataacgctggtttaccattta attaaaactaccgaagcaaactcggcttagtttattcctcaaagttacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnngaaaacatatttcgcaagaaatgttacacgcaatgtccttccacaatttcatta attgtaactattgagtttaaactattaaattttaagttaaattctgttcttttttattttacatgcttctacttcgcatt ccttcctgacctttgtgcgaccaccttaaagtgataatctttggcttacacagtacttcgttgacgcagtttcgatttct ttcttgattttgctacattccttcaaacatcgcatttgattttctttccacagagtgcgttcgatcttcacgtttgcaga ttcgaaagccgctcgcattgattatgaacaaaccaacgactcataatatccgaaagaagagtaaggcgccctcaaggaaa aaatggattggtcaacttaatgaatacccaattttgcatattttatttaaaccgacaaacacaaatgaaagccgatccta gaagcccaggtgtaattctaagacatcgaaataaaagcatatttagagataagaagactcgaaaagtggagaattatata caagagagaattctttcaaaaaactacataaatttgaccagtaggctcttaaaaaagtcatacccgctgtgtctttgtcg cttgtgatcgcacttaaattgaaaaccaatccattaagttttgatgccatttcagcgttaaaaagatcattcattgaaaa gcttgttcgcaagctggttacagctggtgattctgcaagtcgcagtggttaaatgttcgcgtttttgtacatccctcatc tgtttctctaaaaacgattcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcttttccaaacaaaatttctcaacg ggattagtgaagatacgaaagaattgagttattccacatagaagtgggcttaactattatctcctatttgattaccgatt ttacacaagatagaatcattaaccacatattgcattgttttctaaaacatggtcatcgtttcactcaatataaccgttct tcgaaatcaggtaccatgcaaaattctggccgcaattttacatgaattaaaaaattacatcagcgataaattctttttga gagcagaaattctccttttaggggcgtcatccatttgtgattcgacagcgcttgtctcttttattgttttgaataaatta aaatgcttattagtttgtgtgcttgtggtgaaatttcatgaaatgaaacgagagagtatttaagaccccaaacaagaggg caaagtgatccagtgtattcaggtgctcgttttagacagaatcaggtgctctcggtgtcgaacctaagtaagacactgta cgatgtttaatccaaatacacaccagttcaactttgccccgcgagccgactgcagcatgccccacagcttacaggtcaac gccaagaatccgtcgtacctaagcgataacagaacggcgataacttccgcaaacggacctgcttgcttcacagatggtcc ctgcttattttccaatccgcataggacttgtggcgcagatttcgccaaagcgggtctctacaatctgcgtccaagaggct ctgcttgttccagcatctccgatctcccttcagtacctgcaaaattcaagaagtctaaagacgatgccacgccatcgccc gtcaaagccaaacgccagcgtaactccttgaagaaacgactcctcgtgaacgcgcgtgaacgtgaccgaatgcgcgttct aaacaacggttttcaagctctccgtgatgctctaccctgttatatcgctgatggccatatggcgaaaataaccacactgc gactggccataaactatatcaaggccttgaacgaggtcctcaacgaagatgttccatcaattccgcccaagcaacattgc caaactacgccattgcaacatcctccgtcgaacttgtcttctaattcctgctccatgatacaacagattccaaaccagtc gagtcacttcaaacaagtactaccaccaatcaatgtaagtcttactgaagacacaacatattagatttttgtcctcaaga aaaacttagttgaaagttagttctttgtgaaaaaaaaaagaatgaacagggtggggtttgtgcgtcttgcatagagtaca aaactgacagttctcgttcatttgtgttaagtaacagcaaaattaatatgatcacaagaaaagaaagtattaagcatttt tcctgtttgcaaaagttcgtcagctttcagaaagcaaaggaaaattttagtttcactgattctctcggtgcgttatgttt ccactcacttcattccatccacatattttcccactaaaaaccattttagagcttcgtttcttctcgtcattgttttcaaa accttttctatcttgcaagacagtagtaaagagaagacccaactcaaaagggagaatccacggaatagcccaattataac tagtgatctgtttttgtaaatcaattcgttttattaacttgagacaatttcagccttctgcgatctaaatcacttcctta aaacatccttaactaacagttagctacatcatttcctactaaacaggaagacaagctggcttttgtgttttaatctcatc aagttgttctcaaaatttgtttctatttgttctttctgccggcatgcgttctgtggtaaaggagaaaattcaatttaccg gcgcttttcagtttacactttcaacgctattcaactacaataaaacaaaagtaggtgatccgatgacaaataccttttat gcgataatccgttttatgtcaatgcttttcgtttgaagaagtataaaacataagagtccaattttcatgaaaaaccttgt catttgaggcgcacaaatgcctagcaactgaaactagcaacttggttctaaaatacaagggcaccactgaaagagaacac tataagaacaacgagtaaactttaaacaaaatttaattatctcattgctcttgttttatgttattatttctaggtcatat cttcagcaagaatatcaaactgaccagagaggatgaactaagttcacaaacacttcactggatgtagacaactttcaaag ccgtcaaaatttgtcaagttcttcgcgaaacaccgcgccagttttaaagaggacaacataagcttctgaaaaaacgaagc gttttatacatttgagatacatacagctgtaaagtagatagacacaatcaaatgcattttcggat |
Protein
Protein ID | aug_v2a.20740.t1 |
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Definition | - |
>aug_v2a.20740.t1 MFNPNTHQFNFAPRADCSMPHSLQVNAKNPSYLSDNRTAITSANGPACFTDGPCLFSNPHRTCGADFAKAGLYNLRPRGS ACSSISDLPSVPAKFKKSKDDATPSPVKAKRQRNSLKKRLLVNARERDRMRVLNNGFQALRDALPCYIADGHMAKITTLR LAINYIKALNEVLNEDVPSIPPKQHCQTTPLQHPPSNLSSNSCSMIQQIPNQSSHFKQVLPPINVISSARISN* |