Gene
Gene Model ID | aug_v2a.20916 |
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Locus | scaf13320 : 128 ... 4291 : + |
To GenomeBrowser | scaf13320:128..4291 |
Genes list of scaffold | scaf13320 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-Trp10 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Mus musculus short transient receptor channel 1 (NP_035773). |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.20916.t1 | gi|697822590|ref|XP_009647675.1| | PREDICTED: short transient receptor potential channel 5 [Egretta garzetta] | 4.0e-28 |
aug_v2a.20916.t1 | gi|551490708|ref|XP_005796926.1| | PREDICTED: short transient receptor potential channel 4-like [Xiphophorus maculatus] | 4.0e-28 |
aug_v2a.20916.t1 | gi|260832914|ref|XP_002611402.1| | hypothetical protein BRAFLDRAFT_210686 [Branchiostoma floridae] | 1.0e-27 |
aug_v2a.20916.t1 | gi|657744155|ref|XP_008307253.1| | PREDICTED: short transient receptor potential channel 4-like [Cynoglossus semilaevis] | 2.0e-27 |
Transcript
Transcript ID | aug_v2a.20916.t1 |
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Definition | - |
>aug_v2a.20916.t1 aagtttacaaggatgccactttcctggagaagagcacttggaaacaagctctggttatactcctgtcggccactttgtat cctgtgttctttatggtttggctcttctctgaaagctgttttcctaatcataaagttacgaaactatttcacgctcctgt tgtaaaattcttgatcaattgtggactctaccaaacatttatctttttgctggtcattacggccgcttacagcgatttta gccgtagctccacatatggtaagtgcaaaagcgtttcctcgtaaatctttgttgttcgaccctgtcaaagttttgcttga gaagagtgagacgatcattattttcgttatcaaactaccctccgaattggtttttctcaatccctgattcattgaacatt atggctctttcggtgtaagactgaaaatagctcggtgttcgaatttggaaaaacgccattacatggaagttgcccagcct tcctaggcgtgagtcgctgatgtcgtgttgtttacacttatagcaggagtaaaagcaacattcgggtactgattaaaggt acttgaagaaaattcatcaactgtctacttgtcttgcttgtatttatgcttggaacatgagtgtaaaccatttctgaggc gacagttattgttctcaatttctttatacagattggtttattctgttcttcgtcattggatttgtagtggaggtcgttaa agacttgtaccaatttggaagacggcgtttcttttccgacgcttttaactgcatgactgtggcaatagttacctttttca tttcccactacgtcatatggcgggtaactgcacttgagattttgagtgacggtgtcaaaacaaaggaagaattcctcgaa catccttcccgtgaaggcctgttagtttctgaaggcttcatctctgtcggcgtactcctggcttttttctacaatctgtc cttcatgcaagccaatcctagcattggtccactgttacatgccttcatagagatgttgattgatgtggcaaagttcttct tgtatttctttttcatttttttggctttcgctgtgagcttcaccaagctttatacgcagtacttggcaggaaaaagatac ttcacacggaaccaaggcaactcaacgattggcagagatgctcttaagaggtaaggattaatactcacgacgatgaatgc cggctcctattccgttccttgacatattttacagctaacggaaagcgagacttttgagaacatcatcttcctcgttccca gattcgagaaagagagaagaccatgggaacgaggtgagagagcacacactgaggacaattggttgtccgttcccgcgagc agcatatggcacgtcgctagatttcgtatagttttatagttgttttgtttcttttaagttgccagcatgagataatagag ggctgacaagtccttcccaactcgtgttaagccagagacgactcttcattacggtggttatcgaatttccttgttatatc nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnngagagtttttcggggactttctgggcgctgtttggtcaaattgatttagaccgcttacacatta aggaaaaaggttttgaaccaatcacctatgcggcgataataatattcggagtatttaacgtggcagctgttcttgtggca cttaatatgctcattgcaatcctcaacgaatcttacacaagaatatcggtgagttgcttttgtcaagttacataccgtcc atggttgagaacctccataatcgctgcgtagtttgcagctttgttagcaaataacccatacctggcaaaaggtcccgggt cccaacagcgaatcgcactggtggatcgtaaatgtacaccttattctaaaatggcgaccaataaattgttcttttgtttg catgttaattagctttctttgtctcgtcaacatgtataaaaacaaaagaattttgaagtgaaaatgaggcaaagagggct aattagcatgcaaacaaaagaatgatttatcggccgccattttggaataaggtgtacactcaccgctgtgtcacgtcact agtcatctaatttgcataaaccaaaatcttgaataactcggcaaccaaaagtgctatcaccataaaataaacgccattct tcatcattttgaaagctctttcttataagctaataaaaaatttcgtgtcatatgcactttaaagcaaacaaatctcctcg tttgttttacatgcagctcccttgttgttttgaaagacaaattgttatttttttttgccgaaattagattctattggcga ccatgttggtacataccctaaaacgagtattcatctcactgtcattaccatgctgatagtgattgttttaaaattgttac cattaatgtcactcgtctgacttcgttttggctccttgttttaatcgattgacaggaaaaattagacacttcttggaagt ttaccaggacaaagatgtggcttttctggatctacagaagaagcgctcacccttcaccattcagtatcttatatgtgttt tttccagtttgttggtttctcaagcgttttcttccagtctgccttcctgaaggcgcattggtcagtatataaaaacacgc cggtttatctttggcgaatataaatcaaatgaaatgtcacatttacactttttgccggagtataagggtcacattgttaa ttttccttatcgtgataataatgatttgaagtcccgtttgtggtcaacacacaaaacagtcacctctcggtatcccccat cctc |
Protein
Protein ID | aug_v2a.20916.t1 |
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Definition | - |
>aug_v2a.20916.t1 MVWLFSESCFPNHKVTKLFHAPVVKFLINCGLYQTFIFLLVITAAYSDFSRSSTYDWFILFFVIGFVVEVVKDLYQFGRR RFFSDAFNCMTVAIVTFFISHYVIWRVTALEILSDGVKTKEEFLEHPSREGLLVSEGFISVGVLLAFFYNLSFMQANPSI GPLLHAFIEMLIDVAKFFLYFFFIFLAFAVSFTKLYTQYLAGKRYFTRNQGNSTIGRDALKRFEKERRPWERDRLHIKEK GFEPITYAAIIIFGVFNVAAVLVALNMLIAILNESYTRISEKLDTSWKFTRTKMWLFWIYRRSAHPSPFSILYVFFPVCW FLKRFLPVCLPEGALVSI* |