Gene
Gene Model ID | aug_v2a.21046 |
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Locus | scaf13481 : 2749 ... 11500 : + |
To GenomeBrowser | scaf13481:2749..11500 |
Genes list of scaffold | scaf13481 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-IC138-1 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See chlamydomonas IC138 (EDP00613). This protein is a subunit of inner arm dynein. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.21046.t1 | gi|291227368|ref|XP_002733663.1| | PREDICTED: WD repeat-containing protein 78-like [Saccoglossus kowalevskii] | 0.0 |
aug_v2a.21046.t1 | gi|390361507|ref|XP_780217.3| | PREDICTED: WD repeat-containing protein 78 [Strongylocentrotus purpuratus] | 0.0 |
aug_v2a.21046.t1 | gi|676482357|ref|XP_009062672.1| | hypothetical protein LOTGIDRAFT_128740, partial [Lottia gigantea] | 0.0 |
aug_v2a.21046.t1 | gi|198422686|ref|XP_002131353.1| | PREDICTED: WD repeat-containing protein 78 [Ciona intestinalis] | 0.0 |
aug_v2a.21046.t1 | gi|573894483|ref|XP_006634991.1| | PREDICTED: WD repeat-containing protein 78-like [Lepisosteus oculatus] | 0.0 |
Transcript
Transcript ID | aug_v2a.21046.t1 |
---|---|
Definition | - |
>aug_v2a.21046.t1 gagaaatcaaagcaatacattttttgccgcaggagaatccattgctacggtactcatacatactttctaaaaccacaaat atttacaccggcggtatctattaagcaaacttacagtactagtgttgcacgttcatatgtaatactcacaacaaattagc atacataacgtagcttgttatttaagaccttgacatttcgggattaaagtaatatctttatcgagagcaccacactatca acactaggagttttctcaggttttctaatgtatatgtattcactggtagtcttgggcttctctttgtatcagcaatccat ggcctcggagatgactggtcagtcattctatgcagccagcaacgccagtatgtatggtggtttctctcgctctgtgtttg gctcagtgtcgggacgatcttctccggagtctgtcagtgaagatcttcatgaaccaagctctacatatcatgacaagttt tcagcatcacttggaggtgtttattttaccgtgccaattatttgtaaagatcctaccttaatatcaaatttccatgtttt tctgactgtgtaataatatcaaaacaaatttgagactcaccacaaagctttcttgatgcatatgtaggttttaaagatac atgtcctttaaaataattttaactgtacaagtaataataaataagcaatttcacgttcaaccggtgatggcatgagtcat ggtgaaacatgtcctaaaagagtgttttcaaaatttgttttgatgatattgacnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnncaaccatagtttacctgcagactgatagggcaaagttcctgatccagaagttgctgcttacattt taagcatttgtgacaggaattctatctaaagttactagtgactattgtgcaactcatatctgcctatgacagtgactatt gaaagaggcatcgatagcagacactttggctagctggtgagaaaaatatcaagttaaagtgtgcaatatgatcccttaat ctgttcttttttcttctgttttttttttagatattcagacacgcccaacttttgcacgtgaggagctcacagaggcagac cttgataaaatggtagcttcttactgacaacatgcagtttatgctgaatgaaattacaactgaattgttttgttcacaaa aaggaattttccccgtcagttttccttccttgtttagaaacctgacatttcacttcctgtggagttaaaaaccatgccag tttgtaaattgagaagacagactcgttccatcaaaatatgattgtcttcactactgcaattttcagcaagtagnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnaggtgaccttgtattgatagaaaccttgtttcttttcttatgtaaatgtttc tgttatttttctatcattaaatttgaactttctgcaggttcacttgacactgtcagaaacagacacaatctggttgctgg actttcctggcacatctgttgctgaagatagcgagattgccgaaggtatcaaagaaaagaaccaaaaatatgaagaagtg agttgttgtgtttgatgcaattttagtatataaattatttgaagtaagaatgatgcaatgaacttgaaggtattcacctc aagaattcgtggttgttattatgctaaatgtcagctacagtgactttagtatttgcctgcttatgttttaagaaaattat aagaattgttcatataaagcccatttcacatataagagtctgggactcagcttaaattactgagaaattatcagtcattg gggtgattaggacattcttttgaaatcaaggttcaatattattaggtatggaatcctttagggctctcttgaattctaga cttgattgattggagcaagttaacacctttatgcaataatttttattgtcagcaaatgtacatagtaacagcatttcatt gtttttcactccaaggctttgcacaaattatgtaactctgaaactctcctttcattgcaaaaggcacggacttgcctcat attttatacaagtctttgtgccacattcgtaatcataatttttatgttacatcattttcaattattttgcttcagcaagt tattcaaacattttggattgtcattgtgtttctctttctacagcttttgaagaatcgtcttggtaatgatagttatgtag aacgaggaatgcagacatttaacaatggtaaaaagagcaaagaaattcagtccactaaagttgaacttcatgtaagttaa acaaatcttagtaaattaagttacagactcttggtgctttggtgaaagtgtcttaaattgtctcaaattcctttggtatt ggattttcttttcttcccttccctctgttttacttggggatatcaatgagttttggtgagaatcagttctgtatgcaaat tgtcactcagtcataagcagaatttcaatctaattagccaatcaggatggaacacactgattagtgcacaaagtaaaact tcagcctgccagtttgagacaatcatgataaataatttttcatagcgatcaatgggtaacaacagtggcactttgattat tagattcttgtcagtctgccaccatcattgttacaggttcacataatttatgaccatcagtttcatgttcttaataataa ttattatcctcttcaacctgaccatggtatcttagagtttcttggttctgttttcctacaagaatgttgttgcaatttaa taattgaacatgtactgtaattcaattgttaggaggttggatgtatagcaactaactgggacatgtatgacacatacaat gccttggaaacaaaccaggaaggtaagcctgcttccttggtgaccctggaaaagatatgagtgacttaactgagttaata ctagcattgagcaattttatttctttgtaatttacaaagcaaagagaagctagggaatgatataatcttaattttgttat tcaggtgaaaaagacgatggagaggatgtgtttgaaagtctgagccgaccgaccagtggagaacacgcaagcagtcatga tgacagtgagagcatgggttcagtccgagctggcagtgcagcatctggtagtgtcgcaggtaaatttataactactgtat cattattatgacaataagtacgttttgccaagaaaccctttacggtgcagtcacaggcaattggttattttcgtacacct ggacttcttgaggcaatgcgttgcacagggacccccattcactttgccagaggggtcgcgtacgctaggacttctcgatc ttgtgtgttgcacagggtacccatccactttgccagaggaattgacaacttgacagttaccatctctgtgcagttatctg ttatcaaaaggaatgtactacacactactgaactgtagatgtctggtagaacatatagttctttttcttttgttttcatt gctcctgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnttaagcttgttgaatgtttttctcatatctttctttgttaggaagtcgagccagtttgtttacatttaagagcagc tcaattgatgaagaaatcgctgacaagcaagaggacacaggtatcagcgagaaggagatggaggatctggcagcgatctt ggctgaaagaattctccaggtatttctgcaaaatttagcccagtaataactccacaaaactttgtaaatagccaactttt gtttcaacatgcaggtgttacaggttcaaatagcaagaccttaaaattaataacaatgacctgaacgaggttgctgacat gcggttttccttaaaacaatggtttgatgcgggtgctcaatcttgcaggctcagaaaacctggttcaggtcattgttatt aaagatttccgtgcaaatggaccattttgacagttgtgtgctcagatgcctggccgttgaatgagagtgatgctaatgtt gaccttgttttgatagaaacctccttgtttttgttatgttaatgacgctgttatgatgctaattagaacgattttacata agaaaagttgtggcgtttccatcacaacaaggtcagcaccagcctcactttcattcaaaggcgaggaaactaagcacaca actgtagaatggtttattccactttcaccagtggctacgggatttgtcctcgatggtcccgaattcaactccaccacgct ttgtgaatcaccatctggttgcgctctgccagtttggtttctttgaattgtttctttcataaacgcctcgttagcccccc gttgagtcgtttacgcgtttttccccatttaacatcaaacgttctttccttttgtttagtccgagaatttgcagaaagat ctttttgtcatggagagggcaatcgctctgaacatctatcaatcgagacaagcaaagtacagaggactggagatagttcc gggtaagcttgatagcgctatccatcggataagtgtgatagtgatgcaacctcgttctcagggcgtttgtgccctctctg gtagaaaaaactctgggaacgaggctgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactggttggttccctgccgaggtattctta caattccatgtaaattacagagtttcaaattccttttttaaatatgccctttacagctattatgaatacaagtggaaaaa gtcaatccctactttgcaagtgcgattttgggattgattgagacaagaattgcatggagttaccacgaccagagtcactc tacgaacggttcctaaatgacctttacccgtcaaataatcccgttttttttttttcggaaagtgaggatttctttttaac agccttcttcagttacaatgagaatttaatttgattcttttttgttgatatgaatagccatattgtttatgaactaatga gctgaaaagaatcaatttaaattcccgtcgattccttgttttacagatatcgatgccgaaaaacctgatgcagaagacgc ttcatctgcggtggcaaccttagctcagctgggaccaaaccttcacaagctatggaattattcctgcaatttaaccaagg gtcgtaatgtcagctgcatggcgtggaacaagctaaatcctgtaagtagaaagccggaaattgaagacttctgtgatttg tgtcgatgcgtgcagcgagtttagcggtatttcctttaaaaccataacgccaagttccgaaaataagcccctacgtgtat aagcctcttcaaatataagccccccatcctcgtagcgcaaagaaccctccgttaagtcgccctaccgaatataagcccct ggatgcttacacgtggaaattgccctcaaacacaaaataaacagaaaaaaacgatacggtaatacatattcttgaaatat ttaccttccaactataaagcaacccaatcggttttgtaaggcaaatttcccacccaacataagcccctccaaaaataagc cactcaacatgggccgttgaaaaatataagccccagggcttatttttggaattttacggtctgaatcatagttaataatc atgaaattttgcttatgtagtgtttcgaattccttagcgatggcgatttttattgtgacatatcttttatcgttagaatg accttcaagtctttcttttaaaattgatggctcgacttatggaagattgttccaatcttgttcccagtgccttctcattc gcccgttccaacgaggctgaaagagatcattaaatcggatttcaaaaacgataccaactacttctcaaccttctctccta ggatcaatttttgcgtttccacttctttcatttgagctcgcgtatttagaaatttgtcccttctactcataatggctact ttgaaaatcttatcgaaattctaatagggatagtaaccttccgtaaccttccttaacaatgaaataatttcaagtgtatt tcaatgaaataatatcaagtgtatccagtgtattctatcatttttcttttctgcacaggacatccttgctgttggttatg gagagtttgtgttttcagagcaaaaaggaggtttagcttgctgttggtctctgaagaatccagaggtaattattactggt tctgctcgtgataattcaagcatagttcacatccccattggcctgtcgtgacctccctcttcccttcccccagaggtcac ttcatgccgataaacgctttttctcttgtttctcctacagtaccctgaaaggtattttcatctcatcagtggagtaactg ctctggatttttcggctgctcaccctaatctgctagcggtaagtgcagtatattaggcacctcttctagtcaacagaaca aagccatatctgtgcttgaaatatttttaagccgtgatcacccgtctgcatgaactacctcagttgcgcaaatggagccc tcttgaacactagagacggattcccacatccaccacatgacgcctaccgcgatatggtcctgtcgtcccagcgtgttatc gccacatcctctcggaatgttgttgacttgtactttgtggaaaacagttgacagtataaggccataccgtgggaggggtc atagagtgtatgtgggaattcgcctcccattgaacacctgccctcacactgcacgcgtatgcacatggcctcatacagcg tacgcattgccgtgaaagcagacaccatggacaaagggaagggtatgtattcagggctacattgaaaattcgccatgaca ccccatagagtacaaagttttcgtctgtttttgcctcaaaaggttggcatgtatgatggaactattgcgatctacaacgt gcgaaacaggaatgacatgcctgctctcgacagctagtaagtttatgatactccattaaatctactcattaacattatcg ttacgtcattatttgactccaggtaatgttgaatgcatcttcttgtgaacgccatcagttttgaagcttttgtccttgca aagaattccataaactcgtcttgagttctctatttgtttttcgtctgggtttttctttccgcttaaagagacatatcttc gtagaacgtgaccgcgtcgcatatggagtataaacaacccacaatataattggctgaaacggtctagattttctgatcgt gagagacagaaaaaagatattcaggtgaattgcgtcaattgtgcaaacacaatcaatgaatacaagctttcgaatcgttt gccaaggacgctgtaaatcttttgtcagctctgtgtttaacagttattttcctttacagtgagagccagggaaaacactc ttccccagtctggcaagtacgctgggtggacagagatcagggggctggtgaggaaagagacgaaatccttatatctatct cagctgatggtcgggttaccaagtggtctatcaggaagggctttgagagcgcaggtgagaatccagttggcaatatttgt atttttcttggttagaatggagcgtagtatactgggtattgaagcgagagttaaagcaaacatgacgtcgacgacagcga gaaaatctgaaaatgtaacttcgtgtttctgcaattatctcacaattattcaaagtcattacgcttgcaaaatgtgctct aactatcctagaattaaattggaagcagcgtt |
Protein
Protein ID | aug_v2a.21046.t1 |
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Definition | - |
>aug_v2a.21046.t1 MASEMTGQSFYAASNASMYGGFSRSVFGSVSGRSSPESVSEDLHEPSSTYHDKFSASLGDIQTRPTFAREELTEADLDKM VHLTLSETDTIWLLDFPGTSVAEDSEIAEGIKEKNQKYEELLKNRLGNDSYVERGMQTFNNGKKSKEIQSTKVELHEVGC IATNWDMYDTYNALETNQEGEKDDGEDVFESLSRPTSGEHASSHDDSESMGSVRAGSAASGSVAGSRASLFTFKSSSIDE EIADKQEDTGISEKEMEDLAAILAERILQSENLQKDLFVMERAIALNIYQSRQAKYRGLEIVPDIDAEKPDAEDASSAVA TLAQLGPNLHKLWNYSCNLTKGRNVSCMAWNKLNPDILAVGYGEFVFSEQKGGLACCWSLKNPEYPERYFHLISGVTALD FSAAHPNLLAVGMYDGTIAIYNVRNRNDMPALDSYESQGKHSSPVWQVRWVDRDQGAGEERDEILISISADGRVTKWSIR KGFESAGENPVGNICIFLG* |