Gene
Gene Model ID | aug_v2a.21062 |
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Locus | scaf13520 : 54275 ... 58515 : - |
To GenomeBrowser | scaf13520:54275..58515 |
Genes list of scaffold | scaf13520 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 45-1 |
Description | This gene model contains RVP and RVT_1 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.21062.t1 | gi|662215783|ref|XP_008481791.1| | PREDICTED: uncharacterized protein K02A2.6-like [Diaphorina citri] | 0.0 |
aug_v2a.21062.t1 | gi|662215787|ref|XP_008481793.1| | PREDICTED: uncharacterized protein K02A2.6-like [Diaphorina citri] | 0.0 |
Transcript
Transcript ID | aug_v2a.21062.t1 |
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Definition | - |
>aug_v2a.21062.t1 caatacatggtgtcagaagtgggatcgtaagaatagaccaagctctggaaggcattatttgagtctgaagatcaaggatg tccgaaggatcttcgagcggaaatcaagcacctatgatcaatcctgtttcgtaccaaatatcgccaccggaagaattcga cttctcgaaacctaccgaatggatcaaatggataaggcgatttgagcggtttctatctgcgtctggattaagcaaaagag atgaggagagccaagtaaatacgctcgtatattcaatgggaagcaagagcgatgatatactggcgacatttggcctcaca accgaggattccaagaaatatgacgtcgtgaaagacaagtttgacgtctattttgtaaagcgaagaaatattatctttga acgtgcaaaatttcaccgacgtaagcaagaaagcggtgatttataagtcctcgctgaacattgtcaatttggtttgttac acgacgaaatgatccgtgaccgcattgtggtgggtttagcggaccaaaagctgtcagaaaagctccagtttgatgcagac cttaccttggagaaagccattaacagtgtacgacagagcgaatcagttagaagccaacaatctgtagttagagggcaaga ggaggcaagtcaaccagcaaaagtggacagagttcacaagtccaaaccccagaagtctttaaggacatcactgaatcctc aagggaaaacctaaaagcaatcggtaggccaaaacgatgttagcagtgatgtctgcaaaagatgcggtaaacgtccagcg cacaaaagaacctagtgtcctgccaaagatgctcattgccgaaaatgtaaaaagaaaggccacttccaagccgtctgcct aagcgcgaaggtaaatacagtcgtagatgatgattcaacttgctttcttggtgctcttggctcagacgaaattgatagtc tacacacagatccttggaaaacaagtctctattaatggcaatagcgttgaatttaaactcgacactggagctgatgtctc agttgttcctgacttcgnnnnnnnnnnnnnnnnnnnntaagaaactcatctccttgttgtaaggaaaatgtcttgttaga agaattataattcctctctggggacgaagaatatcaaactcaaaattcttcgcagcagtcatattttgcttcaaagaaga aaatttcatctctcaagaagaaatttcatttagagtgtcgactgtataaaacaactttcaacttcacttttcaacaacca actgtaacaaatacatcattcaacttcagttgataactttcatcttcaacatatgaaacattcaacttcatcgtaaaact ttcaagtgttaagttcacaactgaacatcaaacatgagattacaatttattagtcgggttgacaatccgaaatgttcttt taacaacccggttgttgttcccttataacgttgaattatattcgtcgctttgtttgcgtacgctcaatgtcgaccgtaca aaatagggttggcaggcctgcacgacttccaccacgtgtattagcctaatgctcacagttttgctctaacgagtatatct ttcaatgagtcccccttttataggatattataggaggttccttgaaaatttctttaaccatagttgttgttctattaaat accagttcttcatgaggatttgttttaagtttggcactgatgattggtattgtgttacaaaatgtagtgttgagtagcct gtggtaccatgcctcgattccaggaaaaaccatgtgttgtattattccatgatggcggattaaaccatccagttgtttct acgatccggtgtgtttcttgtctaatttcggtcatcgaacaatacatggtgtcagaagtgggatcgtaagaatagaccaa gctctggaagggattatttgagtctgaagatcaaggatgtccgaaggatcttcgagcggaaatcaagcacctatgatcaa tccggtttcgtaccaaatatcgccaccagaagaattcgacttctcgaaacctaccgaatggatcaaatggataaggcgat ttgagcggtttcgttctgcgtctggattaagcaaaagagatgaggagagccaagtaaatacgctcgtatattctatggga agcaagagcgatgatatactggcgacatttggcctcacaaccgaggattccaagaaatatgacgtcgtgaactaagacaa gtttcacggctattttgtaaagcgaagaaatgttatctttgaacgtgcaaaatttcaccgacgtaagcaagaaagcggtg aggcggttgactcctttatcactgatttataagacctcgctgaacattgtcaatttggtttgttacaagacgaaatgatc cgtgaccgcattgtggtgggtttagcggaccaaaagctgtcagtaaagctccagtttgatgcagaccttaccttggagaa agctattaacagtgtacgacagagcgaatcagttagaagccaacaatctgtagttagaatgcaagaggaggcaagtcaac cagcaaaagtggacagagttcacaagcccaaaccccagaagtctttaaggacatcactgaatcctcaagggaaaacctac aagcaatcggtaggccaaaacgatgttagcaatgatgtctgcaaaagatgcggtaaaagtccagctcacaaaataaccta gtgtcctgccaaagattctcattgccgaaaatgtaaaaagaaaggccccttccaagccgtctgcctaagcgggaaggtaa atacagtcgtagatgatgattcaacttgctttcttggtgctcttggttcagacgaaattgatagtctacacacagatcct tggaaaagaagtgtctctattaatggcaatggcgttgaatttaaactcgacactggagctgatgtctcagttgttcccga cttcatcattcctaatctgaatgctacactccgaaataccaggaggacattgacagggcctgatgggtccaagctcaaag tcactggagtaatctctgctaccttaaaggccaatctcttggaatcaaagcgggagatctttgttgtaaggaatttgaaa actgcactattggtataggcccgccaatcaagctctgaacctggtgaaagttgtaaatgctgtagaagagtcatacaaag agtatgtgcaagcaagacatccaaagctgttcaaagggttaggaaaacttgatggcaaataccacattcaattgaaggac aatgctgttccatatgcagtaaacacacctcgccgaattgcactaccccttatgcctaaagtcaaagacaagcttgtgga actagagagacaaggaatgatatcgaaggaagatcaacctacagactggtgtgctcctattgtagccgtgccaaaaagta acggagatgttagagtctgcgtagacctaaccaaactcaacgatcaagtgaaacgagaaagactaatgctcccgtccgtt gacgatgtgctctcccagttaagaggcgcgaaagtcttttcaaagttagacgcgaactcatgcttctatcacatcgagct tacaccggaatgggctctgttgacaaccttcatcaccccgtttgggcggttctgctataacaggctaccgttcggaataa cgactatttttgatcctagtacatcaaagaagacgaacagtacgcgcgccaagcgtcttggcattcgaaagagaaaatgc gtgcctgaacaaccacaagccgagaaagtctgtgtccataaatttcctaacgtcacttcatttcaccacaattactcgta tttgggtgcccaggaagaggcaacacaaagaaacaacatggttggtgaacttcctaaaggtaacctgtgttgcgtggcct ctcaaatggacttattaacagttgacgaaatagaccacctggcatctgaactggaagagtgcaggaggcaatacaagatt cttagtgaaaaacttgataacaagaaggaactgaaaagagagcttaccgctgaagatcatgctcagggatgacgaatctg ttaaattttacacaggcttatattaccaaaccttgcttgttttcatttgacactatggctaattcaacgttacacaaaga actttaaattctgggataaaagaaggagggcaaatcatagcatcagactaatgcgtccaaaactaaacctggaagacaaa g |
Protein
Protein ID | aug_v2a.21062.t1 |
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Definition | - |
>aug_v2a.21062.t1 MSEGSSSGNQAPMINPVSYQISPPEEFDFSKPTEWIKWIRRFERFLSASGLSKRDEESQVNTLVYSMGSKSDDILATFGL TTEDSKKYDVVKDKFDVYFVKRRNIIFERAKFHRHEMIRDRIVVGLADQKLSVKLQFDADLTLEKAINSVRQSESVRSQQ SVVRMQEEASQPAKVDRVHKPKPQKSLRTSLNPQGKTYKQSVGQNDVSNDVCKRCDEIDSLHTDPWKRSVSINGNGVEFK LDTGADVSVVPDFIIPNLNATLRNTRRTLTGPDGPANQALNLVKVVNAVEESYKEYVQARHPKLFKGLGKLDGKYHIQLK DNAVPYAVNTPRRIALPLMPKVKDKLVELERQGMISKEDQPTDWCAPIVAVPKSNGDVRVCVDLTKLNDQVKRERLMLPS VDDVLSQLRGAKVFSKLDANSCFYHIELTPEWALLTTFITPFGRFCYNRLPFGITTIFDPSTSKKTNSTRAKRLGIRKRK CVPEQPQAEKVCVHKFPNVTSFHHNYSYLGAQEEATQRNNMVGELPKGNLCCVASQMDLLTVDEIDHLASELEECRRQYK ILSEKLDNKKELKRELTAEDHAQG* |