Gene
Gene Model ID | aug_v2a.22137 |
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Locus | scaf14920 : 10034 ... 12242 : - |
To GenomeBrowser | scaf14920:10034..12242 |
Genes list of scaffold | scaf14920 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 32-3 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 32-1. This gene model has RVP and RVT_1 domain. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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uncharacterized | GO:0005488 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.22137.t1 | gi|528501348|ref|XP_003200072.2| | PREDICTED: uncharacterized protein K02A2.6-like [Danio rerio] | 0.0 |
aug_v2a.22137.t1 | gi|528504777|ref|XP_005158326.1| | PREDICTED: uncharacterized protein K02A2.6 [Danio rerio] | 0.0 |
Transcript
Transcript ID | aug_v2a.22137.t1 |
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Definition | - |
>aug_v2a.22137.t1 ttaccgcagatgcttccgatactgccaaacgagaagccgacaagagaaaagttgccgttactatttccctgatcggtaag caaacgtatagcactcttaaagatctttgtttaccaaatttacccgcggagaagacatacgatcagcttacagaaatttt gaaaggctattacaaacccaaagtacttgaagttgcagaatcctactgtttccatcatacacttcagagtgaaaatgaaa ctgttactgaatatgctaacaagttgaaacgtttagcagtgaactgtaattttggtacatatcttacaagagccttgaga gatcaattcgtgtggggtgtgaaaagtcaagctacaacgaagaaactcctttctgaggaccgtactttcgaacaagcgtt aaaggttgctcaagcagacgaattagccgaaaaagaatcccaacaacttcagtttaattctaatttaagtgctaaagttc aggctgtgcattctgtaccaaagaaatcatgtctagcacacccagtaaacaaacaacatgtagcgattactgggaaaact catgcaaaattttgttttcgttgtggatcctcacaacatttggctgataagtgcagccacagcacatctgtttgtaattt ttgtaagaagaagggtcatatagccaaagtttgttttaagaagaaaaaggagggtagttgccacacaactcaccttgtta cagctacagctactcaagaagtaaacactaatgaaggtcatggagacactcctgaccgttttacagtctacatgcggagt gtaaaatcttctgacagtcccacacctactccaccactttacaaactttcagttacagttgacaataaagagtttccgat ggaaattgacacgggcagtgctgttaccttgttaagtgctacagatttttctaaactgggagaccacattgaaaccctaa agagcccaactgtgattttgaaaagccacactggcaacattattgaatgcttaggggaaaaggagatggaattaaagatt ggagaccagctagacacattgttagtccgtgtggtcaagggtccatctattcttggtcgtgatttgatggctaagttcaa actaccttggcagaatattttccacatggtttcaactacaagtgaagatattgtgtctcagtatccaaatctgttcgaca acacaacagtgggaaaattaaaaggtatccaagtcccactgcgagtgaaagaagccaaccctgttttttttaaaccaaga gtagtgccttttgcaattcgttccaagtacgaagaagctctagagaaacttgtgccagaggacatcatcgagaaagtgga acattccgaatgggcctcacctacagtgcctattgtcaagccaaatggtgatttgagaatttgtggagactactcagtga ccataaataaattttcagtgatggaacaataccccataccaagctttgacgaactgttaagtaaattgtcaggaggaaca cgttttaccaaaattgatttatctcaggcgtaccatcaactcgagcttacacctgaaagtaggaagtacaccaccatcaa cacgcatcaaggtctataccaatacaagcgcctaacgtacggagttacaagtgctgtgtccatttttcaacgcaccatcg aaaatgtgttggtaaataaattgtattgtttttatgtaaagaaccccccaaaacgtattgcattatgggatcatgaaagc agtcaattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacattattttgtttaatgagatgctaatctgcatgttaaaagaaagatt actgctagtggcatgataatattctccatactacatctcaaaggccaaaaaccatttcaattaaacttacctaatcttag atgcatatgttactgtaattaaatcttattgtttattaatggttaattattgtaataaataatattccatagcacttttc aagaatttcatcaaacgtttcaaaaattcaataaatgtaactgactcca |
Protein
Protein ID | aug_v2a.22137.t1 |
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Definition | - |
>aug_v2a.22137.t1 TADASDTAKREADKRKVAVTISLIGKQTYSTLKDLCLPNLPAEKTYDQLTEILKGYYKPKVLEVAESYCFHHTLQSENET VTEYANKLKRLAVNCNFGTYLTRALRDQFVWGVKSQATTKKLLSEDRTFEQALKVAQADELAEKESQQLQFNSNLSAKVQ AVHSVPKKSCLAHPVNKQHVAITGKTHAKFCFRCGSSQHLADKCSHSTSVCNFCKKKGHIAKVCFKKKKEGSCHTTHLVT ATATQEVNTNEGHGDTPDRFTVYMRSVKSSDSPTPTPPLYKLSVTVDNKEFPMEIDTGSAVTLLSATDFSKLGDHIETLK SPTVILKSHTGNIIECLGEKEMELKIGDQLDTLLVRVVKGPSILGRDLMAKFKLPWQNIFHMVSTTSEDIVSQYPNLFDN TTVGKLKGIQVPLRVKEANPVFFKPRVVPFAIRSKYEEALEKLVPEDIIEKVEHSEWASPTVPIVKPNGDLRICGDYSVT INKFSVMEQYPIPSFDELLSKLSGGTRFTKIDLSQAYHQLELTPESRKYTTINTHQGLYQYKRLTYGVTSAVSIFQRTIE NVLMHMLL* |