Gene
Gene Model ID | aug_v2a.22680 |
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Locus | scaf15786 : 241 ... 11083 : + |
To GenomeBrowser | scaf15786:241..11083 |
Genes list of scaffold | scaf15786 |
Manual annotation
Study field | Collagen |
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Gene name | Collagen Domain Containing Protein14 |
Annotation by Blast2GO
Annotation | GO |
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triple helix repeat-containing collagen | GO:0005578 GO:0005581 GO:0009653 GO:0030154 GO:0030198 GO:0048513 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.22680.t1 | gi|514059381|ref|YP_008123462.1| | 7.0e-33 | |
aug_v2a.22680.t1 | gi|554830511|ref|XP_005925835.1| | PREDICTED: collagen alpha-2(V) chain-like [Haplochromis burtoni] | 3.0e-30 |
aug_v2a.22680.t1 | gi|49477241|ref|YP_035673.1| | 7.0e-30 | |
aug_v2a.22680.t1 | gi|149610333|ref|XP_001514571.1| | PREDICTED: collagen alpha-2(V) chain, partial [Ornithorhynchus anatinus] | 1.0e-29 |
Transcript
Transcript ID | aug_v2a.22680.t1 |
---|---|
Definition | - |
>aug_v2a.22680.t1 gggcgtcaaggaattattggcctggttggagtcaacggaaaccagggaacagcggtaagtatcaccttaggggctgatga gcttgggtcataaaaggcacaaaatgaacgggttttctttaaaattcattattttattcactgnnnnnnnnnnnnnnnnn nnnnnnnnnnnncttgtggtaacagtccacagtcctaaagaagaaaatagcttgttttgtaatcattgaaagccgacaca actcatttttcccgtttgttgtggcacagaaaaggtgaccatcagggaatatactgggattatctccctggggagtcagg ctgaattgatttttggtaaccactgaaccgtatttcccacctttgatgattttgcgtaatgagagtttcggttggtctca acctgactgaagggtgtttttgttcttactcctcccttagtgacattgactcgtagaaatgatacatgtaaaactggatg atcaatgagctgaaaagttaaactatagccttgcttgttcttcattatcagggtatggcgggtcccatcggatttccggg accaacgggatcaaaaggagaaacagtaagagtatattatgcatccatttatggtaggctattttgtcctttgatggatc aatagcaatccttggagcgttgtattggccatcctggtagtcccagaaacaggtagcccggacggagctacctgtttacg accaactataccaatacttaaataccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnaaacagttttaatgagttttagtttttaacttttagcttaactgatgattctccgtgtataa ataaaggttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggagcgtgacggaacga ggcgaaaaaatctccggcagaattgtggctgacgacagttagctcggcaatcacgatttaacaaatgtttcttaggtctg gcccggtcccgtcccgttaagatcaactgcagctactgggtctcccaagatgtgtatgccaagcatattacgtgtgaatt tatctttttttttcttttttctattagggagacgtaggatccgttggaaggcgtggcaagaatggtgctgatggggctca ggttggtgaagtcaattgagtggaggcttaagttgttaaagaagaaattaaacacaaaaattttgatttcaaacaagctg aaagggggttacaaagtttccagcggtaatccttcgtcagaggggaggttttcagtttaggcttcatcgcctttttccta ttgtgtaaagcgaaacaaaacataaacaaagcacgtggctgttgatggttcatagccctttgaaatgaaacgtatagcta ttttcatgtttgttatttatccttctagggtgctaacggggagagaggaggccaaggtaccccaggggaagacggtgcca aggtaaggaattcacctctacattaaaaaatgctgaagctgttgttcgttgttttgtatcgaggatgaaaagaatttgtc cgtagtctacgtttcagttccagcacaacattccttcagttttttagggttcaaaatgcgaaagtatctgtgactgagga tcaaaggttgtatatttgtcctctactttattgtcatgtgtgaactcgtagcattcgttggtcggaaagtgacaatatct ctgcatcagtgagcaagaatttaggatgcgataaaaagatgcgaaaaaaacacgaggatgggtaccatgcagtgtatatt tgaatactttgtttttattattagctacaacacaatgattttctgttaatcattttttttagggagaaattggagacgta ggaattgctgggcaacctggagaaaatggcgacttggtaaacacgcatataacatacaatttttaggtctgatgtcaaaa taaatgaaacgttttgttacttttaactctggaagctaacgaaacaattttctgagtgagaagtatctctcggagtaagg aagtaaatgcggagcagaaacggctctgggagactgaagatatcgcttttgaacaggatagtttaagaaccgattttagg agtgaatcattgagtgagttagtctgtcattaagaaggtgagaatatataacttcaccaatcgtaattcgttttcttttt catgaatcgtttagggtccacaaggcgattcagggccgatgggccaggctggctatttaggtggaactgtaagttttatc agtgtctcaccagttattgtttctttcatgcctagtttattggcttctgtgtttttgtttccaaatttgcaaataactta cgcgctatatcgtctctcgctttggaactattcagggtctttccgggcctcccggtccaccaggaagcgttggttcttct ggccaaaaggtgagttaactttgcaagtaatttaagacactagcgagacattccttgaacgcaaaggctgaccttttgac gtaaataaatttcggttaagagttgttcagagtctctgttttagagccgttttnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcctcaacgttcccctgatttatgtaattttttttttttaggctaaaaga tccgtacctctaacataaaatagagcgatataacgggcgcatggacatctcgtcttttatttatatttgtttggcgaatg taaaaaaaattatcttctcgagagtatcatttaatttgagggagattaccttgaaacccaaaaaggatcaccttgatgac aggaaggaaaaatgaacactctgcaatattagaaacttaaaatttttaaagcgcaaatttttgtttggctgatgatattg tatttttaacttttcttgttgcaggggctgtctggacaacctggtttccgcggagacgcgggagctggcggtagtcaggt aaggaaagatttgtaacaaatcttattaaaattgaattgacgaaaaggactttagtacttagtagttgctaaaatagggt tacgttgtattcgagctctctccttatggctagtcgccgtcttaaggaatatttggttatttatttggttatttaaagaa taactgttttagtaaatttccaagtaattctcttgatttcttcgggtgaaacctcgtcaaatcgtgacattttttttacc gacgacgccgccaaaacattttttccgacctccaaaatttttaagcacaagaaattcgccatcagtttttccttatttgg tcaaacttaacgataatggctcatatcatgggcttagggaaccaatcagaaagctggaaaatcattatcctgagctaaaa atgtactaatttgtgacatttaacagagaaacttggtttaagtgaagaagagggaaattcagtgatgcaaacggacatta gggtggttttcaaatgactgtagaaaaaccagtaccaattgaaagtactccgaccaatcacaacaggagcaaacagcaac atgagccaatcagaattcgtggcaattacctgtaacttgcacaaagcgcggtaaaaattgcgcatccaggatgcgactga ttttgattttgcttctcattggttgaaaaactcgtgcaagatttcttaagccaatcactaagcaatcacaaaggcgtgat tactttcgacagtcatttgaaaactttaaataatagctacagctcagttacaggaagtgtttcatctttctttccctttt ttttttttgctagggtccagtgggacaagctgggtctccaggacctcaaggaatcccaggaacaagagtgggtagaatgt gataaaatgataatcaaaatactgcgttatttgacccgctcctgtactattctgttttccacacgactagggaagcatct ccactttcttcttctttgctttatccccaaacaccgccttacacttttcatacccctcactccggttaacacccaattga gttggttgacaggattttcgaagaaatgacgtcatttcgtgggtttctatacattcagttagcaactatagatatcgcgc cacgaactcagcaaatctagattaggtacaaactacccagggcgtgctttccaactgtaagcgacattcctatttcccca tctaagtaataattattacactttattctaaagttttaggctgaagccagttaaaaacttagttcacctgacttacaaag tgttgcattttcttgtgtgcagggaggcattggtcccactggacccaaggggcccaagggagctgcaggatcgaaggtct gtgattctactaataagtgtttcaaagttaatgagtatttctgtaatctgtgttccacgagctatgagcctatttgaaag gtaagttcttgtcatcccaatcgtgcgaaggcaagggtgtcacattttgacacttccctttgcaggaccgggtattggcg tcttactttgtcggactagttcgccatctatccaaaacagaatttgatgagacagtacagcgctcttctccgcttaaaat taatcatgaatcaacgtacttggttctgcccctgtttttctttcattggcagagggagtagtcgtaatttttcgtttgag atgtgtaaggttgaagcgcaggtcattttgacggatggaggagtgtgctaactccgtaaagggaagtcattggtttacgt tattcatagcaattcggagtcttcggaaaatgcctcaatcattatcgataattaatgcatctgttctgaaagtgtttttc gagtgtttcnnnnnnnnnnnnnnnnnnnnnnnnnctctccctccttatagggtgagatgggagagagcgggcctggtgga aaagacgggcaaccaggaggggaagtaagtaatatcggggaaaaccaggcttgcttatgctgttctgaaattcgcgatga tattctctgatctttctgtttcttttttctcacgagggtgtagtaggagagatgggatcacgtggggcccctggtataac tggcggtgcggtaagctttgttctgtattgcagctcattagcgtaagaaaaagaaggaatgtcagtggtcaagaccgtgn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngattggcgacgcaaagcattaacggacttgtatggttcc atcaaacacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnttcagggtgaggcaggtgagccaggagaggttgggacttcaggcccacagggatcacaggtaacttctcgttt aaatttcacctgaaaatgttccctgctaatacgaaacaaaaagtacaccaaagcaccatttccattacttgctgagagta tgtcttaaacattcggtaccctttggtggaataactcatcgactgacgagaaaaaccaacttccgctgacgttgcatgaa tgttttctaaacatttggcacttttacagttgaatttagatcaccaaacatgttattaattcagacgtttttttgtgtaa tctacctgccatttgacctcaacctgccatttgccatcagtgtcaatggtgtctaccctaagtcatgtgttcgatttctg agtgaaagcttgttgttttctcttcaattagcctcgaaattagcacggaaaattgaacacaataaagcatgtatttgtgg agaaatgagtctttcaaaattggaaatttgaatgggcgtatccaggagccgatgagtaggagcatacaactgcattctat tcctgtcacagcgtttttatagcccaatttatttttagatcgaatttccttagaacgagactcccgtggaagtgccatga ccaatcatgtcactggaccggagctgcctttcgttcacaaaagcaaaggcttacataaaaatgcccgtgacattagctta gtataggagttgtatgctcttactcatcggctcctggcgtatcactgctttacatccataaaaattttgctcaatttcat tcaaaatacttcggtcgttaccaaagcggacggtcataaaattggaaggtcactgagtctgtgagaaaactcatgtgctc ctaacaccaaatttaaatgaagaaattggcagaaactcgcatatgcagtaatttcctgtctttttcacagggtgaacttg gcagcatggggaaacaaggtcttccgggtaacccaggagctgcaggtccagtggggccgaaaggggcgcagggtcaaaac ggagcagacggtgatgacgtaagtcgaaagatctagaaatttccaacaggaggtgtaagtgatcactagtttgtcacaga ttggagtttcttagatttgcacaactcagccctggcgggtttttaatttttagacactaagagtactcatgcattcgcta ttttttgcgcttttttgcgctttaattatagggtaaacctggtgtagatggaccgcgaggaattgaaggaggtcttggac gaactgtgagtctgccagaacttaaaaacacactatgtgtaagaagcactgaagtgactccttctttgttgtgtaatatt tttcaaagggtgacgcaggagaaccagggggaaagggagctgttggcgaaattggcccaaaggtacgtacgaatgtcttt ttgcctttgcttcacaagaagtcttcttcaaagggtaataacctcgcatgaaaatacacaagtcgttttttatttggatg gttcaatgaagattgtgaccaatctaaaaatagctcgctccttgaaaacgctgttacgggctcaaggttacaattgaaac tctcctggctatgggcttccacacttctttcattgttttttcttcgttctttcttctttgcaatgtttgtttgtacgtga tgtactactatctttagggtgaccgaggagtatctggagatcaaggcccgccaggattcttgggaccaaaggtatcgtgt ctgattgagttataacagattaaaagaatcagtgacttcagattcggctccaacattcccttcgtatcaataaattactt cttttttttaccagggacagcctggaagtgctggtcgtaggggtggcttagggatggaaggttcacaggtaaaattatca gtttggtattgaataggaaaaaaaggacccagtgttttgtagtttcttttggattgttgtatctcagaggattccctctg gcgaatggcaaacgttagagagggtgccaaatgtttgcatatcatagtgtgactggaacctgttcggatgcatacccacc ttgtcgtcctatttgtctcctatgagttatcaactaaagatacaccgacaacaaaatgacttgttgctgttcataatact aaatggaagaactaggagaccttaacgagtaatcaagtaaagagaataaacagacgtttgcaaatttgagtccaacctga taatctgtgccaaaaacttcttgtcacgccttgaaatagactggaccttgatttatctgtatagcaaaatcttaagcgtg ggtacagaccttcctctcagtctgtaacagctaagagtaaatattgaaaaactaaagaggccatcttttccagtggccaa aacaaagtttctattcttttccatagagaagacagccagggaaatgtaaaatgctcatagaaaacacaaaagcacgtatt catgacatggcgaccagtcgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtctcagggagctg atggcgagcgaggacgcgttggagagaccggagagcagggcgggatggtaaatattgtcattggaacatctgaaacttgg gctgccgagcaaactggcctttgaatgaaaacgagattaacttggcctcgctttgaaaaaactgttcttgagtcacagac cagcggtggtttacattaggaaaactaccaagtctgggcagcctcaccgttgttattcaaaagcggtgtcgcgaagcaaa cgaaagaaaacgttttttgaaagatatcgctgcaataaatcgttgttaatatttttcttttcttcagggctctatcggac cgactggcctttttggggcaaaagtaagctttatttggttttgtttttacaatattactaaaagccctcgaaaattaggg taaaagccactgagaaaccgtgtacaatcatcgtcggatcaattttttttgttttattggtctgcaacatatatacacct gtgtacacccgtaattacaccaactaaacttggcaaactggttttggccagacgagnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnatatcacactgagccatccattgtttgatcatttcctacaatacaatagtctttgg tacaatcaagtaatggtatttgaaatattccaaattgtttacaacaactatttaatttctttgttcaatttttcccctca gggtgatcttggaattcaggtgaggtttcacagctgaatttcataataatgtcttcatgaaaaagaaatatatttgatta ccatttcttttatcaactttttttacatttctatttcttgatcttccagggcgtcgaaggtgcaagggtaagtttttttc gtttaaaatgacatgtacctagcagaaacaagattcttttcaaattattagcgattgaaaaattcactttcataacgtta cgggcttttactttcaaatgttctcagatttgatccgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctg tctttagggtgaccctgggcctcctggatcacctggcccggcg |
Protein
Protein ID | aug_v2a.22680.t1 |
---|---|
Definition | - |
>aug_v2a.22680.t1 GRQGIIGLVGVNGNQGTAGMAGPIGFPGPTGSKGETGDVGSVGRRGKNGADGAQGANGERGGQGTPGEDGAKGEIGDVGI AGQPGENGDLGPQGDSGPMGQAGYLGGTGLSGPPGPPGSVGSSGQKGLSGQPGFRGDAGAGGSQGPVGQAGSPGPQGIPG TRGGIGPTGPKGPKGAAGSKGEMGESGPGGKDGQPGGEGVVGEMGSRGAPGITGGAGEAGEPGEVGTSGPQGSQGELGSM GKQGLPGNPGAAGPVGPKGAQGQNGADGDDGKPGVDGPRGIEGGLGRTGDAGEPGGKGAVGEIGPKGDRGVSGDQGPPGF LGPKGQPGSAGRRGGLGMEGSQGADGERGRVGETGEQGGMGSIGPTGLFGAKGDLGIQGVEGARGDPGPPGSPGPA |