Gene
Gene Model ID | aug_v2a.22786 |
---|---|
Locus | scaf15927 : 33776 ... 38408 : + |
To GenomeBrowser | scaf15927:33776..38408 |
Genes list of scaffold | scaf15927 |
Manual annotation
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.22786.t1 | gi|260787218|ref|XP_002588651.1| | hypothetical protein BRAFLDRAFT_101562 [Branchiostoma floridae] | 8.0e-23 |
aug_v2a.22786.t1 | gi|391347217|ref|XP_003747861.1| | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR5-like [Metaseiulus occidentalis] | 9.0e-20 |
aug_v2a.22786.t1 | gi|410904807|ref|XP_003965883.1| | 3.0e-18 | |
aug_v2a.22786.t1 | gi|410904811|ref|XP_003965885.1| | 3.0e-18 | |
aug_v2a.22786.t1 | gi|348543929|ref|XP_003459434.1| | PREDICTED: E3 ubiquitin-protein ligase UBR5 isoformX2 [Oreochromis niloticus] | 7.0e-17 |
Transcript
Transcript ID | aug_v2a.22786.t1 |
---|---|
Definition | - |
>aug_v2a.22786.t1 tgctacagggaaaaaaaatgttctttcgagagaataattggaatttttcagcaacttgcactgtcacgaagcaatgctcg ggttcactcgcggtcgagcgagaactgggtttaagattcacctcacagacgctatggcagcagaagatgatggtgagggc gacgtgttggcaatttcatcccctcggatactattcgttcgactaagaaaggataaatcgaaagacgccattgaagatga aatatttaagtgcatcaacaaagcgttggaagaatccggggagaataaaagctttccagaggaacctaaaaactgcatta cgttgcctgatttcgccggatgtcgaatactgcaagtggcggtgggacccgaatatgtggggattttgttggacgatgga cgtgttggaagatttaaatgtgtgacgaaaaaccttgattctaccaagaaactttggaaacctgatcaatgcacaagtga accgagttttcaagttcaaagcgacgaggtctttgctagacaacttcaaagcgaatttttgaataatggtgcgaccacca gtacttcttcagggagaccaaattcgttgacttcaaataggggcacccccagcttgtcctctagaatttacactggtaac ggacgtgtttctgatcgtccagtgcagagtcctattccgtctggttcgtcttactctagcaatgcaagtaggaacacctt agttacacgtgaatctcagacggaaagtggttacatggaagcgctttccggaaacggtctgtcgctcgatgacagtcaaa cttttgttggtcaggcggatacgattgtacaatcaaagagcatgacgaaaagttcagaatcaggcgaaaacaccactata acgaaacatacttcattaccatcaacttcaaatggaatatcaaccaaccaagaaaaatcgaaagtgcaagataatattaa tcagaaactagaaaattcttcagaaaatgttccagtaaatggtagatcagtgtcatcctcatcgagttccgttgcacggc gatcagtttcatccccaaggctgcttcagaggactgtctttgcgacaaattacccaatgatgaggcagattcctgcaccc tttttgtttccaccgggcagtgtctcattcccattctattcaaattccgctagtgggccaatgtttggtccccgaggatc tttgcgccttgagcctcgtgttgtgagagctcaactggctgaggcaggggtgtttccagttaggggatctcgaacttctg cgacacaaggacgtgaagaaagaccttcaaccgacaacaagactgcaagctgtacatgtaatgatgcagacttttgcttc ccagaagttggcaatgtacagtggatagaattagaaaatgtaagtggcctgggcatttcaccattttattccaaacggtc tcccatcaagaagttacactgtaaaatcattgaccatttgtcaaccaccagtcataatgaacaaatcaagagcttgctaa gagttggtctctagttgatgattaaaataatttagcataatgtttaaagtattgacctgttagtttactattgggttttg ttagctggtatgctctttttgtggcatagcaacaagaaacttttttttgtataaattgtctgaatctaagtggatgaagt gaaggtnagaatgttcaaaatactattgttcttgccttgatttactttatttacattttttaatgacagggtggagatgt tgttttctcacatatttctgccatgcactctgagtttttaatggttgaaaaaggaactggggtcctttaccactggccat attccactgatgttgcttgtgacattgctacagagatttcactatcccaagatactatgtacctgccgttggcaaagcct catcccctgggagaggctctgggtctggactctgagaaagttagtcttttatcgtcttctagagtgcgatgttcagttgt cacagcaactggaaagatttgcacattttatgacaaacttttgagaggtgagattgcagagtggaatagctctgtttgaa aacaataataattttgataaaaaggttctttttattcactttggtggctgcaataataattattatnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnngtaccaaaatactaatatagatcaatgatttaattgttttttaaaaaaatgattcaacctt ttcaattgtcttgtagagtccaactgtgggaatccacctgctcttatacaggaactctctcatcctgcgatatcatttgc tgaactcaaaggagaaacaattctctcaatcagttgcagcgagttctttactagtgtaatgactcagtctggtaaagtct tgtggtggtatgttttcctgagtagtatattttcaatgacacatccactgctaccttttggcatgtactctgcattatga tcttgtagggttctgtaattttattatgaataataattgctaattttggtatgtgagtagagccagtgtggttgttattg tactctagtgaaagtacatgagtctgagagggccaagatcatgttatttgtgagcacatatacaagtgatcattgtctgt aacataatccaaaatctgcattaattcgttatgcaaaagccaaattcaatgattcagagatacagtatttcccagcccca caaccaaaaacagcagtctgaagactgtagtactttactgttagtttgtaaaatttgaatttcagtattgctatgtttgt atgcatttgaacttttctttttaatgtttttaacagggggctgttaccagcagaggaaaggcaaaacttcaaacagaaat tgagcaaagcaaccaatgaatccagtcacataactgtcaatgaaaaggttcaactgcgtcagcattttcctggttttcct ggtgctctggtgtacaaatgctgtgatataagaggacccttgattggtcgcttgatttgccatgagtcaccagaaggaac tagcacagttgtaacaaaaattaaagtcgagcctctaaataccaagactaatgccttatcagcctcaacctccagcaagg aacaagaaattgaaggtgttcagaagggacgatcagtggaagatgaattgatgttcagtcagaaagatattggaggatct tccagccctcacacaagtgtaagaaggaaagcgcagatctctagcaaaccaactaatggctcagaagtatgggaggttaa ggatgttgttttccttgaaagtgagaacaaactgttggggacagtggctgcaatagatggccctcatgttattgttaaag tgacaagtctattgtcaccctcaaagtcatccttacgtgttttcaaggtctcagaattggaagctgtacctagtgaaggt gaaagtttagagggaacgtctgtggctcagccattcccaagaagttcactttaccgaggatgcattcaacattccccaag gctaatttttggaaaatcatctacacaagctgataaagacctgctctctggattgaagcctttagctcttgccacgacgt cagtaggaatttccttacttgcacagcgcatttctgacagcaaagctttttttttgggaccagcactggagcaaaacatg gacagcagcaaagtatacacttgtagtagtgatgtgagtgtttcgaacactaatgaggatagcgtgtgtaccgtggaagc tgaagccgtcagcatttgcggggctgctcttgcaccaatgtcaatgctaccgccagtcacagctgccaatgaaaaactag tgactggacaaaagcgaaaaagagtgaatgatgatggaaattttgatgatgtttcagatgctttggcaaggggtgaaagt aatgttctccacccatgcaatgttcagttttccactaacagctatcctttactgcatactgtgaatgataatgatcttgt gttattgactgatgtaaatggctgcctgtaccccaggccatatggcacaaagctgtcaaatccaaatgctggagaaatcc ccccactgcaaagttttggcctagggacacgattgggtcaggtgactgaagggagcttgccaccggaaagaattttgatg atatttgctggtaagtttgcttggataatttctcatttacttgagtaaagtagaagaaaaaaggtaatgaaag |
Protein
Protein ID | aug_v2a.22786.t1 |
---|---|
Definition | - |
>aug_v2a.22786.t1 MLGFTRGRARTGFKIHLTDAMAAEDDGEGDVLAISSPRILFVRLRKDKSKDAIEDEIFKCINKALEESGENKSFPEEPKN CITLPDFAGCRILQVAVGPEYVGILLDDGRVGRFKCVTKNLDSTKKLWKPDQCTSEPSFQVQSDEVFARQLQSEFLNNGA TTSTSSGRPNSLTSNRGTPSLSSRIYTGNGRVSDRPVQSPIPSGSSYSSNASRNTLVTRESQTESGYMEALSGNGLSLDD SQTFVGQADTIVQSKSMTKSSESGENTTITKHTSLPSTSNGISTNQEKSKVQDNINQKLENSSENVPVNGRSVSSSSSSV ARRSVSSPRLLQRTVFATNYPMMRQIPAPFLFPPGSVSFPFYSNSASGPMFGPRGSLRLEPRVVRAQLAEAGVFPVRGSR TSATQGREERPSTDNKTASCTCNDADFCFPEVGNVQWIELENGGDVVFSHISAMHSEFLMVEKGTGVLYHWPYSTDVACD IATEISLSQDTMYLPLAKPHPLGEALGLDSEKVSLLSSSRVRCSVVTATGKICTFYDKLLRESNCGNPPALIQELSHPAI SFAELKGETILSISCSEFFTSVMTQSGKVLWWGLLPAEERQNFKQKLSKATNESSHITVNEKVQLRQHFPGFPGALVYKC CDIRGPLIGRLICHESPEGTSTVVTKIKVEPLNTKTNALSASTSSKEQEIEGVQKGRSVEDELMFSQKDIGGSSSPHTSV RRKAQISSKPTNGSEVWEVKDVVFLESENKLLGTVAAIDGPHVIVKVTSLLSPSKSSLRVFKVSELEAVPSEGESLEGTS VAQPFPRSSLYRGCIQHSPRLIFGKSSTQADKDLLSGLKPLALATTSVGISLLAQRISDSKAFFLGPALEQNMDSSKVYT CSSDVSVSNTNEDSVCTVEAEAVSICGAALAPMSMLPPVTAANEKLVTGQKRKRVNDDGNFDDVSDALARGESNVLHPCN VQFSTNSYPLLHTVNDNDLVLLTDVNGCLYPRPYGTKLSNPNAGEIPPLQSFGLGTRLGQVTEGSLPPERILMIFAGKFA WIISHLLE* |