Gene
Gene Model ID | aug_v2a.22791 |
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Locus | scaf15927 : 100007 ... 102462 : + |
To GenomeBrowser | scaf15927:100007..102462 |
Genes list of scaffold | scaf15927 |
Manual annotation
Study field | Transcription Factor |
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Gene name | Adi-myc1 |
Description | Named thus based on a BLASTP result against NCBI nr. There is a Myc_N domain in the N-terminal region of this gene model, but leucin zipper motif seems to be missing. Adi-myc1 forms single clade with Nematostella myc (Nem35) by the molecular phylogenetic analysis (Maximum likelihood). Adi-myc-like, Adi-myc1 and Adi-myc2 are aligned tandemly in the genome (There are five intervening genes between Adi-myc-like and Adi-myc1). Nematostella myc genes (Nem32, Nem33, Nem35 and Nem65) are also aligned tandemly in its genome (See Simionato et al., 2007). |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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myc proto-oncogene protein | GO:0005515 GO:0005634 GO:0006355 GO:0044763 GO:0048522 GO:0050896 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.22791.t1 | gi|156405679|ref|XP_001640859.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.22791.t1 | gi|259013287|ref|NP_001158444.1| | myc proto-oncogene protein [Saccoglossus kowalevskii] | 1.0e-25 |
aug_v2a.22791.t1 | gi|317575769|ref|NP_001187019.1| | oncoprotein myc [Ictalurus punctatus] | 3.0e-25 |
aug_v2a.22791.t1 | gi|41055786|ref|NP_956466.1| | transcriptional regulator Myc-B [Danio rerio] | 8.0e-25 |
Transcript
Transcript ID | aug_v2a.22791.t1 |
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Definition | - |
>aug_v2a.22791.t1 ataatagattgagactttcctcatcgggaacgcgtgggttttaggagagtgcgtaggaggctaaattagtgcccaagccg ccgcgttgtgctaggctttgaatgaatgactttgaattggcgtgaggtgtaaaagttttcacattagctcgttgcgcgct ctcgagatagtgtcggaggtttatttgttgttaaccagtgtcaaaaactccgacaaagcgaaacacagggcaattataag ctatttctgccgagtcatcttgtacgaggtaagagaagaatattgagcgttcttgtttagtgttgattttgttcaaaaca tatacttttactacacaatcacgcggagtcgtgagtcacaactagccactaacgggaatttgtacattgcagtttatgag aggagaaaatgacagaggactgcttgattttagagagctttgagaacgagtttgatccacttcaggcatcgctattcaaa gatttaagtgatgattcaccagagtcgaagagcaagggtaaagaggcaactgatgatctctggaagaatttttcatttcc gccaacgccacccatttcgccggcttgttctcccccgtacgacaccacagatgaagcaagagaacagccagtttgtctag gaatatctgacgaagaattctctctggacgacgagtgttctctgtatttccaatccagtgacttaaaggatatattgatc aaagactgtatgtggaatggagcggccttcgataaatcaatggacaggaaacaacgatttcattcaaaaatggaaccgag tcgacttttatcacagactcctccacttagtgaatctgcagccagaattttgagtgttgacccatcagaaatttttccct tcccacttagcacgagtcctggtagtgaaattcgcgaagatatgactgatcagttggattctggtaggtataaacttatt tgataaataataaatgtactctctggctgattgaatctcgtccgtctgtgttcgccgatctatgaccatagttgacattg atccaatccttgattcccattcattgcgcccctgttttttgtcatttttctcttgtacatcgttatgtttcctacatact tcatgagaagtgggctaatttctttttcgtctcgaatttggaaagggcagtgctatgacttctaacatctgtatttgtat tcttcaatagaagaagaggaagtcgaagttgatgtcgttactatagagaactcaaaacgagagcagaaagccgaaatcat ggaaactgaagaggagaaaacttgtgaaacaagcccgggtgaaacatcgattgatgaaccaccatgtatcgaaacctcga gcgtcgaatacaaacaagacttccctgacaacgaaaaatcggattttgtgactaagatcagaacgcgccggcacaggaaa gccgttgttctatcaagcgaggggttgaataacagggacggaaaaaaggtagtaaaaaacatcagcagttctggagaaag cgatgaatctgaaaatgacagtgagtttacgcgagcaactcacaatgttttagaaagaaagaggagaaatgacttgaaac tgaagtttcaaaaattgcgcgactgtgtgccggaactaaaggacaacgaaagagcgcccaaagtctcaatcttgagaaaa tcatgggagtacattagtcacataaagcaagaggaaataaaactactggcagagctggaaaaacaaaagaaaatgaacgc agttttactaagaaagctactggccttgaatcaaaccagctagacagatctcgggaacttcagtttgccacgcttatgct ccccacagggagtgttttcatcaattccccagcgaaagaaacgctattttaaaagtgagcatttgattctcacctcattc atttggtttcactcgcaagtctcagtgcgattcaatgacaaagaattacattttgttggtcacggtacaaaaattactga agctagttttcagacgtcgcaattgtagtggaatcgctcaattgtacatacgcgcagttagaattaattttgaagatact gcttgtaaataggtttctaataattattgtgctgtttcatcctcgttcgaattgaaaccggctttgtggatgctcaacaa aggcattagaattatcgacgtagtattacaaaagaatggttcgaaccatttttggtaggaaacttaaataaaatctagaa ggaaaatggaacagagactggtaactgttattaaatgttcgaatttatactccgtgtaaggaaaatttccaattttgttg gaagaaaacgccgaagtagtcaaattcttttgtcacacgttactctcattcaaaccgagtgacactgaaaatgaatgggc ggcaaatttgcatttgtgtgttgacagaagctatagactaaactgcataaatttca |
Protein
Protein ID | aug_v2a.22791.t1 |
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Definition | - |
>aug_v2a.22791.t1 MTEDCLILESFENEFDPLQASLFKDLSDDSPESKSKGKEATDDLWKNFSFPPTPPISPACSPPYDTTDEAREQPVCLGIS DEEFSLDDECSLYFQSSDLKDILIKDCMWNGAAFDKSMDRKQRFHSKMEPSRLLSQTPPLSESAARILSVDPSEIFPFPL STSPGSEIREDMTDQLDSEEEEVEVDVVTIENSKREQKAEIMETEEEKTCETSPGETSIDEPPCIETSSVEYKQDFPDNE KSDFVTKIRTRRHRKAVVLSSEGLNNRDGKKVVKNISSSGESDESENDSEFTRATHNVLERKRRNDLKLKFQKLRDCVPE LKDNERAPKVSILRKSWEYISHIKQEEIKLLAELEKQKKMNAVLLRKLLALNQTS* |