Gene
Gene Model ID | aug_v2a.22832 |
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Locus | scaf15995 : 676 ... 4520 : + |
To GenomeBrowser | scaf15995:676..4520 |
Genes list of scaffold | scaf15995 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 53-6 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 53-1. This gene model contains BTB, BACK, Kelch_1, and Kelch_2 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.22832.t1 | gi|291221923|ref|XP_002730968.1| | PREDICTED: kelch-like protein 26-like [Saccoglossus kowalevskii] | 0.0 |
aug_v2a.22832.t1 | gi|260809369|ref|XP_002599478.1| | hypothetical protein BRAFLDRAFT_122751 [Branchiostoma floridae] | 9.94922e-44 |
Transcript
Transcript ID | aug_v2a.22832.t1 |
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Definition | - |
>aug_v2a.22832.t1 tgtgctcagttccgtgagcaaggtgaattcatcgatgttcgtttaaaagttggagaggaagagtttgtggctcatcgcat ggtacttgcggcaaatagcgattatttccacgccatgtttgcacacggaatgaaagaatctaaccaggacgtgatcgagc tcaaacatgaaaacatttctgttactgcaatgaagataatgatggattccatgtatagtggagagatctatgtgaatgat gaaaatgtttttgaagtattgattgctgcagaccatcttcaagttgcaagtgttgtggaacaatgctgcaaataccttac ccagctgaggtttgatgtgcagacatactgccgcgtcatcatggtggctgatcagcacactttaaaggacttaaaagagg ctacagaaaggaaaatggcgtcaatgtacaaggacatttgtgagaaggaagagtttctgtctgatatgaatgccaatata ttaacagctattctctgtcgagatgacctcagcgctccatcggagaacttcgtcttcaaatcagtgatacagtggatcaa gtacaggaaggaagaaaggatgaatgtcgcagctcaagttatcggagctgttcgtttgggactggtggacatcaaggata cgatcgaggaactcgatactgaggagatgcaggtgatcccagaaataaacctgttgttgcagagagcattaatatacagc cacagtccttcgaggagttccgcgttcgcattggagaaagggaaaccaagatcaatgactacggtaggagagaaagtctt tcttgaagtttgcagaaaaatgtcgtttgtggagacgagnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcaatcattcga gcagtcttttctctctgcttgtcacgcaatgccaccccatcaccacctgtcagtcacttccacaaaataagacttgcgtt gtgtattacaagaaggagagtgtaagacaataaagtgcttgccgggaatgaacaagtatcctctacacacaatgaaattc agggctgtagaaatgtcataaggtttgttaatatgccccctttaactcccaggtgggggggggggtactttaggaatttc tgggtggggatgtgcctctaggactctcaaacccttagcctataccagagctagtttcagctggattttgctaccctata ctagagtgaactctccaaatcactcctatcctagagcagctgttttccagaaactgaggtcactagcacagtctaaagca atgccaaaacaaagccttataccacaatcacttctctcttaaaaaaggattcatttatacttgtccgagattttttttca tcaagtcctatatttcaggttaacctgattgaataaagcaccgtcatgagtgttgctttttgggtgcaacagcaaaaaaa cttataacctatatgggtacaactgaaacaacaatgtattttatatgcaaaaccatccaccttctttcttgcaatcacaa agaacagtcctaagtgagtcctaattttggacacgggttttcgatttttaaccccgtatcctggtcgcatcactagctgg agtcgctggttacatgagtgatgccaagcatgtacgtacgcattatcaagacaataaattgtttaattttaaccagtatt agtaccaccgatttccgtctgaattccgatttttgacagttaataatatccagtagcattttatgatagtcatgtatcaa cgctgttgaagctgagtcaatttcatttgtttatatttttgagcagcaattcctgtttccatagcctagataaaatcttc aaccaagtttcatgaaaaatgatagcctattctagacccaaacagtctgatttataccctatgctagagtaaactgcttg aaaaccatacccttcacagcagcacatacctacgtggcccatatatggcaacccttccccccccacccccccgccgcttt aactcctgggtgagggttttggttttggttaacgagatatccctatgtgaaaaagcatgaaccaatggagtgatcaacct tcacttgttttcctcacgagcaaaacaaatttccattgaacttactgcaggattttgaagtgcaaacaaaaggaaaccaa gttcaaattctgatttctgctatgattattaccttgggaattatacctctgcaccacattccctttttcaaaagctaaga cttttttctttttccactctggcatgcctgactccaaagaagggaaaggtacttttatttgagcaaatttgaaagttctg tagtgtacagggaagttatagatcttgagacaaaatgtgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn gtttgattttgtatctgagagtatcaaatggtatttcacaaaaacttggaaaaaatccagttggccccggcaggattcaa acctgtgactctcaatcgcttggctgttcaaatggtctgcttctgagatattagaaatttattaatggaatttgtcatta aattcattcaaagtgcaggccgtacttgatgtgattttttaaatagctaggcataaatatacctgcagaaatttcaaatt aaaccaaatcaacgcaaatgttggtcctgatctaggaaagagaaaaactggagtacctgggcgaaaacctaatgaagcag aatagaaaaccatgcaactcagcccattatggtgccaagactccaaatcatacctgggtggcattggtggagggctacag ctctcccactgtgccagccgttgcagtaagaactaaatgatgctttgtgctacaaaaaaaaaatgcttgttgttgacttt tacatttccaggtacttgttgccattcatcataaaactgacatctgttattttgatgtccagtccaagtcatggaagctg ttgtcatcaatggaaaaactaactaacgtatatggatgttattctgcagaacttgttggtaattatttatatgttacagt aaaattccctacctgggaatatggtatttgttgttatgacatagttcatgacatttggagcacacttccaccaattcctc actcatcaggcattcaaattggcttcttgtgccatgttgaagaccatctctatgccatttacgagtcttctgccccttac agatatcacatagctacaaatcaatggcaatctgttgctagctcgaaagctctttgcaaccacagcaaaatcaaattttg taacaaagcagctactgtgtacaaatcatacttatatgtattgcatggtcaaggacaaattctattttgttttgatccaa agaaaaatgtttgggaacaaagagcatcaaccaaaacaccacactttgggtctttcagtcttttggttgtaaacaataaa ctctgtgttgcaggggggcattgctcactcaaatcatcaagttctgaacctggtgataaggctgccattgaagtttacaa tgaccaagaaaatgtatggtctgttgtacaacaaacacacattccacgaaatgatcttggtgcattagaaattgatggga gggtatatttcatcattaacgctttcccagttgacagcggtattacaatcccaccaggagaggtctacccagttattttg gatgagtgggaaaatttaaaaaaaatcaggaaagatgcagtgttgtgctatgctcctataaaaacagagaatcttacaac agaaaatgaatagggtaacctgaaaagctaaggcatcaatatgagtgttgtcattgcgtagaattgataaatataaaatg acaac |
Protein
Protein ID | aug_v2a.22832.t1 |
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Definition | - |
>aug_v2a.22832.t1 CAQFREQGEFIDVRLKVGEEEFVAHRMVLAANSDYFHAMFAHGMKESNQDVIELKHENISVTAMKIMMDSMYSGEIYVND ENVFEVLIAADHLQVASVVEQCCKYLTQLRFDVQTYCRVIMVADQHTLKDLKEATERKMASMYKDICEKEEFLSDMNANI LTAILCRDDLSAPSENFVFKSVIQWIKYRKEERMNVAAQVIGAVRLGLVDIKDTIEELDTEEMQVIPEINLLLQRALIYS HSPSRSSAFALEKGKPRSMTTVLVAIHHKTDICYFDVQSKSWKLLSSMEKLTNVYGCYSAELVGNYLYVTVKFPTWEYGI CCYDIVHDIWSTLPPIPHSSGIQIGFLCHVEDHLYAIYESSAPYRYHIATNQWQSVASSKALCNHSKIKFCNKAATVYKS YLYVLHGQGQILFCFDPKKNVWEQRASTKTPHFGSFSLLVVNNKLCVAGGHCSLKSSSSEPGDKAAIEVYNDQENVWSVV QQTHIPRNDLGALEIDGRVYFIINAFPVDSGITIPPGEVYPVILDEWENLKKIRKDAVLCYAPIKTENLTTENE* |