Gene
Gene Model ID | aug_v2a.23211 |
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Locus | scaf16493 : 3972 ... 6216 : + |
To GenomeBrowser | scaf16493:3972..6216 |
Genes list of scaffold | scaf16493 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 33-2 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 33-1. This gene model has RVP and RVT_1 domain. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.23211.t1 |
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Definition | - |
>aug_v2a.23211.t1 tagaccacgaaggacaagatggaaattccgatgaagattgttatttcttaggagcagtcgaagacgacgagttccaaaca aaatggtccgtggatttatcactgggaaaagcacagatgcgatttaagatcgatacgggtgcagacatgacagtcattcc agagcccttgtacttccaaaccggattaaacaacttgcaaaaatcctcacgacaactgtttgggcccggtcagtctaaac tttctgtaaaaggagtgatcaaaggaaacctgaaaaccggaaatggcaaagagagcacgcaagaaatctacgtcgtggaa agtcttaaagaaccgttgttaggtcgaccagccatcgatgcccttaacctggtgcaaaaagtcgacacaatccattatga ggacagtagaagaattgagcaagaagttaaaaagatgtacccctatttgtttaaaggtctgggagagttagaaggagagt tcagcatcaagttgacacctggctcagcaccttacgcgataacaacaccaagacgtgtagcactacctctcatgccgaag gtcaaggaagagttccagagaatggaaaaacttggtgtcattttaaaagttgacataccaactgattggtgcgcaggcat ggtcgtagttccaaagccgtatgggagaattcgcatatatgttgatctgacaaaactaaatgagagtgttctacgcgaga cataccctcgaccaaagattcacaacctgttggcccaaatcagtgaatcaaagttcttcaccaaattggactgcaactct ggattctggcaagaaaaactcgatccagattcccactttctgacgacgttcataacaccatttggcatattctgtttcat tcgaatgccattcgggataaagtccgcgcctgaacattaccagaggaagatgagccaaatattagagggatctgaaggct atatctccattattgacgacttgctcatccatgggaaaacgcaagaggaacgcgactgtagactcaaagcagtgttaaag agacttgatgacgcggcgcccatcctaaatgcagaaaattgtgaattttcgaagaaagaggtcaagtttgctggatacgt tctcaacgaagaaggcatcaagtgtgacccagagaaaacagagtcaattcaggatatggacacacctcagaacgtgattg acgtacggaggtttctcgcaatggtcaaccagttgggaaagtttgttccccacatggcagcaaaaaccaaaccaatcagg gatgctctaagcacgaagaacgaattcctttggggaccgacccagcaagacgcctttgagaagctaaaaaaggaactaag ttcaaccccagtccttacacattatgatcctgccagaaaaagaatcctgtcggtagatgcttcatcttatgaactcgtcg cagtgctcctacaagaacaagaaaatggagcaaggaaaccagtagtgtatgcgtcaagatccatggcaagtaccgagcaa aggaatgctaaaattgaaaaagaagctcttgcgacgaattgggcgtgcgagaaatttaatgacttcatcctgggaaaaga catcctcatcgagacagaccaccaaccgttggtgccgctgtttggcttgaaaaacttggatgaactccctcctagaatcc aaagatttaaaatgagattaatgaaatactcatccaacatctgccacatcccagggaaggacttaatcattgcacataca ctttcaagaccaccactgagaaaatcaccaacaaaaacagacatacgtctcaatgaacgctttccaaacaattttccgca ggatttcataattttgaccttttcaagtggaatcactccgctaaaaaaaagtaaatttcataagaaaaatcgtaaaactt tttatatgttgaagaaatgggtgttacttcgcgtttctggtggaatgagaaggataaaagtaggaatatattgttcgtat ttttgaggactgcaatttttgtacaatttcttgccattgcaagttgttaaaaccggcggacgtgaaaaaaggacggttct agtgactttaaccttttccattttctgccgacagcgaaatttcttccgcacaaaaccacattgcttatacatttctcctt tcattcggaaaccaggggtccgaaattcggacccttgcatttttactctgctgaaatagtaagaaaaaaaaattgctatc tctgt |
Protein
Protein ID | aug_v2a.23211.t1 |
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Definition | - |
>aug_v2a.23211.t1 DHEGQDGNSDEDCYFLGAVEDDEFQTKWSVDLSLGKAQMRFKIDTGADMTVIPEPLYFQTGLNNLQKSSRQLFGPGQSKL SVKGVIKGNLKTGNGKESTQEIYVVESLKEPLLGRPAIDALNLVQKVDTIHYEDSRRIEQEVKKMYPYLFKGLGELEGEF SIKLTPGSAPYAITTPRRVALPLMPKVKEEFQRMEKLGVILKVDIPTDWCAGMVVVPKPYGRIRIYVDLTKLNESVLRET YPRPKIHNLLAQISESKFFTKLDCNSGFWQEKLDPDSHFLTTFITPFGIFCFIRMPFGIKSAPEHYQRKMSQILEGSEGY ISIIDDLLIHGKTQEERDCRLKAVLKRLDDAAPILNAENCEFSKKEVKFAGYVLNEEGIKCDPEKTESIQDMDTPQNVID VRRFLAMVNQLGKFVPHMAAKTKPIRDALSTKNEFLWGPTQQDAFEKLKKELSSTPVLTHYDPARKRILSVDASSYELVA VLLQEQENGARKPVVYASRSMASTEQRNAKIEKEALATNWACEKFNDFILGKDILIETDHQPLVPLFGLKNLDELPPRIQ RFKMRLMKYSSNICHIPGKDLIIAHTLSRPPLRKSPTKTDIRLNERFPNNFPQDFIILTFSSGITPLKKSKFHKKNRKTF YMLKKWVLLRVSGGMRRIKVGIYCSYF* |