Gene
Gene Model ID | aug_v2a.23393 |
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Locus | scaf16759 : 8547 ... 9735 : - |
To GenomeBrowser | scaf16759:8547..9735 |
Genes list of scaffold | scaf16759 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 53-2 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 53-1. This gene model contains BTB, Thoc2, and BACK domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.23393.t1 | gi|291229076|ref|XP_002734502.1| | PREDICTED: actin-binding protein IPP-like [Saccoglossus kowalevskii] | 7.0e-34 |
aug_v2a.23393.t1 | gi|543352878|ref|XP_005521172.1| | PREDICTED: actin-binding protein IPP [Pseudopodoces humilis] | 5.0e-33 |
Transcript
Transcript ID | aug_v2a.23393.t1 |
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Definition | - |
>aug_v2a.23393.t1 cacctgccaaatacacgtcacgttatcttcaaaacccgccttgccgagagctcttctctgatacatcccttgaaggtgag gttgcagatattcttcgtttatcttctcttcgcttcctcgcctaaaaagagtaccgtaccagcctagtttcagctacaac atggtcgctcattctgagattctcttgtcgaaatgtgctcagttccgtgagcaaggtgaattcattgatgttcgtttaaa agttggagaggacgaatttgaggctcatcgcattgtacttgctgcaagtagtgattatttccacgccatgtttgcacatg gaatgaaagaatccaaccaggaagtgatcgagcttaaagatgaaaacatttctgtggctgctataaagatagtcatcgat tccatgtacagtggagagatcaatgtgaatgatgaaaatgtctttgaagtattgattgctgcagatcgtcttcaagttgc aagtgttgtggaacagtgctgcaaataccttatacagctgaggtttgatgtgcagacatactgccgcgtcatcatgttgg ctgatcagcacagtttaaaggacttaaaagaggctacggaaaggaaaatggcgtcaatgtacaaggacatttgtgagcag gaagagtttctgtctgacatgaatgtcgatgtattatcagctcttctctgtcgagaggacctcaaaactccatcggagaa cttcgtcttcaaatcagtgatgcagtggatcaagtacaggaagggagaaaggttggatgttggagctaaagctatcggag ctgttcgtttgggactggtggacagcaaggatgtgatcgaggaactcaatactgaggaaatgaaggcgattccagaaata aacatgctgttgcaggaagcattaatacgcaactccaggccttcgaggagttccgcgttggcactggagaaagggaaacc aagatcaatgaattcggtaggagaagaagtctttgtttgcacaaaaacgccgtttgtcttaaggagtgtaattatttttt ctcaatcgttcgagcagtcttatctctgcttgtcacgcaaccccaaccaatcaccacccttcattgacttgctcaaaatg agacttctagccagcacgagaaggagattgtaaggcaataaaaggctaatcccgagatttaaacacata |
Protein
Protein ID | aug_v2a.23393.t1 |
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Definition | - |
>aug_v2a.23393.t1 MVAHSEILLSKCAQFREQGEFIDVRLKVGEDEFEAHRIVLAASSDYFHAMFAHGMKESNQEVIELKDENISVAAIKIVID SMYSGEINVNDENVFEVLIAADRLQVASVVEQCCKYLIQLRFDVQTYCRVIMLADQHSLKDLKEATERKMASMYKDICEQ EEFLSDMNVDVLSALLCREDLKTPSENFVFKSVMQWIKYRKGERLDVGAKAIGAVRLGLVDSKDVIEELNTEEMKAIPEI NMLLQEALIRNSRPSRSSALALEKGKPRSMNSVGEEVFVCTKTPFVLRSVIIFSQSFEQSYLCLSRNPNQSPPFIDLLKM RLLASTRRRL* |