Gene
Gene Model ID | aug_v2a.23633 |
---|---|
Locus | scaf17063 : 8806 ... 12322 : + |
To GenomeBrowser | scaf17063:8806..12322 |
Genes list of scaffold | scaf17063 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 39-66 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains NB-ARC and NACHT domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.23633.t1 |
---|---|
Definition | - |
>aug_v2a.23633.t1 tatacatgtgaaaattacagtttccatggtaaccaaaatcacgaaggaaattcaaaaacaatggcggaaagatttccaga ttttcgagttgaagagattcaagaactgaagcaaaattcagaaaaccaaaacaagaagaaaagtacgacaacctggctgg ctgaatgtctggaccagctgggccgaaagcaagaattttgaaactaatttgctttcttatgaaggtaaacaactacatga aacattacaaaagttcttcgccgagatcctgacagtttaagagttatgttggcctcattcgaccgacacctgagagaaaa ggatgcttccttctcaatagccaaggatatcgagttttccaacagcagaaaagtaattgaaggaaaagcaaggcttcttc gtcaagaaggcttcggaaaaaatacgcgtcacaaaataaacggatggcgttacagaaaatttctcgtgtagcagtataag caaataatagcatgatctgacgtgatatttggcataaataccacttgtgatatttcaaaattgtgtctcaaatttcactc gcctaacggctcgtgaaattatataaaaaaaatttggaatatcactcgtggtatttatgccaaatatcactacaaatcat gctattacctatactaactgtatcttgacaataaaatgttaattgaatccgttggtcagttacatttgttttgacatttg tagcggcattgaaagggcttcatcgcgcggacatcgtgcgcgaatgtaattccctaaaaaattttgccctttatatgata aacaagtaatcccaaatgccctcgggcaattaaggattaatttcacacgtattttcaaagtttccccaaaattaaaatta aggattaatttgcttcgcgactcgggcaatgtttgggaaaacgttcaaaatacgcgtgaaattaatccttaattgtcctc ggttccatgcgatttcataaacttaacttcgtttaacttcattaacccagttgaccactggtgttctgattggtcaaagg cttatggcttattgtacgggtaaactcggacatataattactggcaatcacgcgtcgtatgatgagtgactaaaagttga tcactccatcagaatatatggttaaatataaattgatctctgtttttattccttgtttgttcttttgttgtagctcgtgc ttcgtgcccaagccacgtcatagagggaatacgacaagtatacctaaagtgtgaaggggtgattttgccagttctttggt gtgaaggattcagcttccagatagagaacattttcaccagacttaaaatagttgcaaaagaaaagacacgcggaatagcg atcacaaaagaagtcaccaacattacaggtatcttcacaccacaccagtgttgtaaacaaccgcagattgtgttgattga aggcgaacctggtatgggaaagaccacctattcccaaaaactggtatttgagtgggcaagcaaacaatgtcctgattggg atgagacttttccaagaattgatgtgctcctgttcctcagatgtcgtggaatcaaatctactatctgggacgctattgaa gaccaaattctgccagatgaaattaagccggaggagaaagagatgtttttccaatttttgaaagaaaatccctccaaggt gttgcttgtgttggatgggttagatgaggcagacccacaaaaactggaaatgtacttgaagcttattcaaaggaagcagc ttcttggctgttacattgttctcacgtcacgccatgaagcggggaaaaaagtgaggccgtacaccgacacgttattagag attgtgggattcacaagagctgatgcaaagtgtttcataagaaagtattttcaacacggggaacacttggcagaaaaact tatttcaaaagttcatcttgacttggatgaggacgaggacgaggacgaggacgaggacgaggacgaggacgagggagagt actgggacgaggacgagtacgaggataaggatttaagggaactattaaaaaaccctttaaacactcttctgctctgtgtt atcttcgaggatttagagggaactctaccaaccaagaggacgcagctttacttagagattgttctctttattttgagacg ttatgaaagcaagaacggcatatcaaatagaggtaaagaccttttattagtttacaagaaggaactgatgatcctaggag aacgtgcgtttgactctctgcgtaaacaagagctctatttcgatgaccacgaaggggatatcaaggaaagtttgttgatg aagtttggctttctctcgatccagtctggtggtagtaagagagctccttgtgaacgttacgggttttttcataagagttt tcaagagttcttttcgggttacttccttgctttttctgccattgataatgttactaactcacactcagtactgaccgatg agagatacggggatgaaccatctcatgttcttaaattcatgattggaatcgtagctcagcaatccgaggaaactgcagtg tcaattgtagaaagtatagcctcaattgtgaatgagacaggcggcacatctcatcagctcgtttttcacttagcatttgc taagaacataattatggaattcaaaacttattctgaaaacctttatacaaaattagttcgtacccttggcgagagtcttg atttggttcacgtgataatgggccctttcaatactccattcgactgggagtctattgtgacgtttctccacgcccttgaa tttaactcgaccatttcaagcttgtacatgcttcggttcacgtttcttgatgatggtaccaatattctctctcatgtact cagagtaaacacctctctttcttctttgggtttacattacaactccatcgaagttaagggagcaaattcacttgctcagg ccctcagaggaaacacctctctttcttctttgggtttgactggcaattatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctctttggatttgcattccaa ctccattggtgatgagggagcaaattcacttgctcaagccctcagagtaaacacttctctttcttctttgaatttgactc gcaattccattggggaagagggaacaaattcacttgctcaggccctcattgtaaacacctctatttcttctttgaatttg gattccaactccattggtgataagggagcaaattcacttgctcaggccttcagagaaagctcctctctgttcttgaattt gaatcacaattccattggtgctgagggagcaaatgacttgctgaggccctcagagtaaacacctctcttttttgtttgga tttgtcgttcaattccattgatgccaagggagcaaattcactttcccaggccctcagagtaaactcctctctttctt |
Protein
Protein ID | aug_v2a.23633.t1 |
---|---|
Definition | - |
>aug_v2a.23633.t1 MAERFPDFRVEEIQELKQNSENQNKKKTRASCPSHVIEGIRQVYLKCEGVILPVLWCEGFSFQIENIFTRLKIVAKEKTR GIAITKEVTNITGIFTPHQCCKQPQIVLIEGEPGMGKTTYSQKLVFEWASKQCPDWDETFPRIDVLLFLRCRGIKSTIWD AIEDQILPDEIKPEEKEMFFQFLKENPSKVLLVLDGLDEADPQKLEMYLKLIQRKQLLGCYIVLTSRHEAGKKVRPYTDT LLEIVGFTRADAKCFIRKYFQHGEHLAEKLISKVHLDLDEDEDEDEDEDEDEDEGEYWDEDEYEDKDLRELLKNPLNTLL LCVIFEDLEGTLPTKRTQLYLEIVLFILRRYESKNGISNRGKDLLLVYKKELMILGERAFDSLRKQELYFDDHEGDIKES LLMKFGFLSIQSGGSKRAPCERYGFFHKSFQEFFSGYFLAFSAIDNVTNSHSVLTDERYGDEPSHVLKFMIGIVAQQSEE TAVSIVESIASIVNETGGTSHQLVFHLAFAKNIIMEFKTYSENLYTKLVRTLGESLDLVHVIMGPFNTPFDWESIVTFLH ALEFNSTISSLYMLRFTFLDDGTNILSHVLRVNTSLSSLGLHYNSIEVKGANSLAQALRGNTSLSSLGLTGNYXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXSLDLHSNSIGDEGANSLAQALRVNTSLSSLNLTRNSIGEEGTNSLAQALIVNTSISS LNLDSNSIGDKGANSLAQAFRESSSLFLNLNHNSIGAEGANDLLRPSE* |