Gene
Gene Model ID | aug_v2a.24439 |
---|---|
Locus | scaf18266 : 12497 ... 16633 : - |
To GenomeBrowser | scaf18266:12497..16633 |
Genes list of scaffold | scaf18266 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 20-4 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 20-1. This gene model contains Rapsyn_N, TPR_4, TPR_1, TPR_2 and DUF2977 domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.24439.t1 |
---|---|
Definition | - |
>aug_v2a.24439.t1 aagtggataaccaacacagaagtggaagagtcgaaatcaaacacgatacagatttccagttaatgggtgacattaaaaaa gcgattgagtaccttaaacaagatttgacgactgcggtagaaaatggtgatcgggaacgagaacggggagcctatagaag tctcggtattgcgtaccagttactgggtgactatcgaaaagccattaagtatcatgaaaaacatttaaagattgcaattg aaactagtgatgggggcgaagaaggaggagcctatgaatgtctcggtaatgcttacgactcactggatgactatggaata tccgttgagtaccatgaaaaacatttgaaaattgcaataaaaattggtgatcggggcagagaaggaagagcatatggaaa tctcggtaatgcttaccattcactgggtgactatcgaaacgccattaagtatcatgaaaacgatttgaaaaatgcaacag aaattggtgatcgggacggagaaggaagagcctgtggaaatctcggtaatgcttaccagtcactcggttactatcgaaaa gcctttgagtatcaagaaaaaagtttaaaaattgcactggaaatgggtgatcgggaacgagaaggaaaagcatgtggaaa tttgggtaatgtttatcactcgatgggtgaccatcgaaaagccattaagtatcatgaacaagatttgaaaattgcaacag aaattggtgatcgggacggagaaggaacagtctatggaaatctcgggaatgcttaccagtcactcggtgactatcgaaag gccattgagtaccatgaaaagaatttgaaaattgcaataaaaattagtgctcggggcggagaaggaagagcctatggaaa tcttggtaatgcctaccagttactaggtgattatcgaaacgccattaagtatcatgaaaaagatttgaaaattgcgagag aaattaatgatcgggccggagaaagaagagcctatggaaatctcggcaatgcttaccggtcactcggtgactatcgaaaa gccattgactttcaagaaaaaagtttgaaaatttcactagaaataggtgatctgaacggagaaggaaaagcgtgtggaaa tttgggtaatgtttatcacttaatgggtgacaaccgaaaagccactaagtaccatgaaaaagatttgaaaattgcaacag aaactggtgcgcgggacggagaaggaagagcctgtgaaaatctcggttgtgcttacaattcactcgatgtctatcgaaaa gccattgagtatcaagaaaaaagtttgaaaattgcattagaatttggtaatcggggcggagaagaaagagcatatcgaaa tctcggtaatgcttaccgttcactgggtgactatcaaaaagccattgagtatcatgaaaaacatttgaaaattgcaacag aaattgatgatcggggcggagaaggaagagcatatcgagatctcggtattgcttacgactcactgggtgaccatcgaaaa gccattcactttcaagaaaagagtttaaaaattgctctagaaataggtgatccggacgaagaaggaggagcatatggaaa tctcggtaatgcttaccggtcactgggtgactatcgaaaagccattgagtatcatgaaaaacatttgaaaattgcaacag aaattggtgatcggggcggagagggaaaagcctatggaaatctcagtaatgcttaccagtcactcggtgactacagaaaa gctagtgaatatcttgaaaaagatttgaaaatcgccctggaaataggtgatcgggacggagaaggaagagcatatggaaa tctcggcaatgcttaccggtcactgggtgactatcgaaaagccattgagtatcatgaaaaacatttgaaaattgcaaaag aaattggtgatcggcgcggagagggaaaaacctatggaaatcttggtaatacttaccagtcactcggtgattgtcgaaaa gctataaagtattatgaaaaatatttgaaaatttcaacagaacttggtgatcgggacggaaaaggaagagcctatggaag tctcggtaatgcttatcagttaatgggtgactatcaaaaagccattgagtatcatgaaaattttttgaaaattgcaaaag aaattggtgctcggggtggagaaggaatagcctatggatgtctgggtaatgcttaccagtcactgggtgaccatcgaaaa gccattgactatcatgaaaattgtttgaaaattttaacagaaattggtgatcggggaggagaagcagtagcctatagaag tctcggtaatgcttaccactcactgggtgactatggaaaagcaattgagtatcacgaaaaaagcatgaaaattgcaacag aaattggtgatcaggccggagaaggaaaagcttttcacagcattggatttaatcttctctttcttgaacaaactgaaaat gcgataaaaaattttgtttccgccttggatgcctttaattctttgagatctctcttgaagtctgaagataatttgaaaat agactttcgtgagatgtacgaaaagacgtacactgctttgtggatgtcgttgctaagaatcgaagagatcgaagaagctt tgtttgcagctgaacaaggccgagcgcagactttgtctgataatttgttgattcaatataaactaaatgcgtccttatca tctgccacaattgacaccaaagagacggtatcacgcctcatcgcaaaggattcctcaccaattctttttctagcaattaa tggctttacgaccaacatctggtttctgagaaagggaaagaaagttagatttaggcaagggaggctggatggtgacagaa aagagaaagatcctttgcaagccttactgcaatcatctttagaaaaaatcggagctggagatacaagaagttgtgaagat cgcacgtttgatgaacttgacaatgaatgctcgtttagcatagacgtgagcggtgaaggagctggaaaatcaccattgcc gcctttagataatccctttaagccattttatgatgcagttattgatccaattcttgacatgcttgaacctcaagacgagg agttggtcattgtttctcatggtacgctctcctttgtcccatgggccgcagttattgaatcaattaggattcgcattgtt ccatcacttacaagttatcaattaatcttaagtgtagccgaaggacatcacaacaagaagggggcacttttggtcggaaa tccctgcctaaaggagttgaagaaaccaatagatgacttaccatgtgctcaagaggaagtggaaatgattgcatcaattc tgaacacgatagctcttgtggggagagaagcaacaaaagctgaagtgatgaaacggatgtcgtcagttggactaattcat attgccgcccacggaaacgagcgcactggggaaattgccttgtctccaaaccctggatggtcttcaaaattccctcaaag aaaggattacgttttaaaaatatccgatgtgcaggctgccaatcttcgagctcgtcttgtggtgcttagttgttgtcaca gtggacgaggcagagtcttgaagggtgagggtgtggtcggtatcgcgcgtgcttttttggcagctggtgctcgttctgtg ttggtggccctatgggcaatagatgacgaagctaccatggtgttcatgaaaagtttctaccgacatctgaaggaaggaaa aaccgccagtgctgctgttcagcaatcgatgaaattccttcgtgaatctgatcagttttctgagatgggatactgggctc cattccaacttatcggggatgacgtcaagactgaattcgaggcggatgatgacgtcacaaaatgagaggaataagttttt tccattcctttgtcagtataaccggcgtaagacgtttccccccccctttttttcaaaccctaatacgtttccctgcctat ttaacttttcggtaatgccacgtagcggaacatgtgtagtggtttattcaagcaaagatagacatttttaccacagaaag acagatgtgtttaagacatactcaacctgactgactttaggtcatattagtgattag |
Protein
Protein ID | aug_v2a.24439.t1 |
---|---|
Definition | - |
>aug_v2a.24439.t1 MGDIKKAIEYLKQDLTTAVENGDRERERGAYRSLGIAYQLLGDYRKAIKYHEKHLKIAIETSDGGEEGGAYECLGNAYDS LDDYGISVEYHEKHLKIAIKIGDRGREGRAYGNLGNAYHSLGDYRNAIKYHENDLKNATEIGDRDGEGRACGNLGNAYQS LGYYRKAFEYQEKSLKIALEMGDREREGKACGNLGNVYHSMGDHRKAIKYHEQDLKIATEIGDRDGEGTVYGNLGNAYQS LGDYRKAIEYHEKNLKIAIKISARGGEGRAYGNLGNAYQLLGDYRNAIKYHEKDLKIAREINDRAGERRAYGNLGNAYRS LGDYRKAIDFQEKSLKISLEIGDLNGEGKACGNLGNVYHLMGDNRKATKYHEKDLKIATETGARDGEGRACENLGCAYNS LDVYRKAIEYQEKSLKIALEFGNRGGEERAYRNLGNAYRSLGDYQKAIEYHEKHLKIATEIDDRGGEGRAYRDLGIAYDS LGDHRKAIHFQEKSLKIALEIGDPDEEGGAYGNLGNAYRSLGDYRKAIEYHEKHLKIATEIGDRGGEGKAYGNLSNAYQS LGDYRKASEYLEKDLKIALEIGDRDGEGRAYGNLGNAYRSLGDYRKAIEYHEKHLKIAKEIGDRRGEGKTYGNLGNTYQS LGDCRKAIKYYEKYLKISTELGDRDGKGRAYGSLGNAYQLMGDYQKAIEYHENFLKIAKEIGARGGEGIAYGCLGNAYQS LGDHRKAIDYHENCLKILTEIGDRGGEAVAYRSLGNAYHSLGDYGKAIEYHEKSMKIATEIGDQAGEGKAFHSIGFNLLF LEQTENAIKNFVSALDAFNSLRSLLKSEDNLKIDFREMYEKTYTALWMSLLRIEEIEEALFAAEQGRAQTLSDNLLIQYK LNASLSSATIDTKETVSRLIAKDSSPILFLAINGFTTNIWFLRKGKKVRFRQGRLDGDRKEKDPLQALLQSSLEKIGAGD TRSCEDRTFDELDNECSFSIDVSGEGAGKSPLPPLDNPFKPFYDAVIDPILDMLEPQDEELVIVSHGTLSFVPWAAVIES IRIRIVPSLTSYQLILSVAEGHHNKKGALLVGNPCLKELKKPIDDLPCAQEEVEMIASILNTIALVGREATKAEVMKRMS SVGLIHIAAHGNERTGEIALSPNPGWSSKFPQRKDYVLKISDVQAANLRARLVVLSCCHSGRGRVLKGEGVVGIARAFLA AGARSVLVALWAIDDEATMVFMKSFYRHLKEGKTASAAVQQSMKFLRESDQFSEMGYWAPFQLIGDDVKTEFEADDDVTK * |