Gene
Gene Model ID | aug_v2a.24632 |
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Locus | scaf18579 : 13266 ... 21823 : + |
To GenomeBrowser | scaf18579:13266..21823 |
Genes list of scaffold | scaf18579 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 29-4 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 29-1. This gene model contains RTV_1 and rve domain. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.24632.t1 |
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Definition | - |
>aug_v2a.24632.t1 gtcgtgtatcagaatatcacatctggcgacgaggatgggacgtcgaggaatgtctttttactagtttcttttaccatttt gtgtttggaggggatatattttttcatgatgcccggcggaggatcaaacgagggagatggcagttcggcgagcgcaagta gtgaggtttcgactccagtggcggtggaagttggcagtttgcagccttttcaagttaaaggtgatcctcattccgtttcg cagcggtggagaaaatggaaaagagcgtttcaattgtacgtgcttggtaaagggatcacaaacgattcgcagaaacgtgg cctgctacttcacacagctgggcttgacgtacaggaattttatttcacactggtgcctgatggtgcagagatgaactacg ccgaaacgtttaaggtagtggatgaatattttattccagaagctaatgtaccttttgaaagacatttgtttcggaaaatc agtcagagtagtgaggaaacggtcgatcaatttgtttgccggctcagacaacgagccgcttcgtgtgagtttggagaacg ggaagatgagtacatcagagatcaattgattgacaaatgttactcggcaaaattgcgtcggtaatttttggaaaaagaag gcagtgttgctctgaatgatctactagttaccgctcgggcgcaggaagcagttaatttgcagatggaagcaatgagggct aacagtggttgaggacaggtgaacgctgttgttgacgatggggcaaggggaggtgacataagttcagagcaggtcaacag tgtggtggatgtaagtgggggtactagtagcgggaagagggactgtttcaattgcggtcgagagggccattttgccaggg ttaggagatgtcctgctcgaggtacaaaagtgtgatcagtgtggggagattggacatttcaaggccaagtgtcgtaagag gctcgccaaggattcctatcaggggcaaaagcaaggtgatggtcggcgtgattggagaaatgcatctagtgtgaatgaaa ggggcagaaagacaaacacaaattatgttgacagtgatgccgaatcgggacaaaatttaacacctaactatgtgttttcg gtgggggataggctgggccaaaggagtggagtggtaacgattgtagttggaggtgttcatttgccaaacgtccttattga ctcaggagcaacatgcaaccttttaggccaaggaacttgggagtggcttaaatcgcagaacatccagtgtcagacccgaa aagaggccaaagctttatttccttatggaaatacaaagccattgccaacactcggaacactttcaacagttatcatgtcc actgacactggtgcaaccttcaaaactgattttgtagttataaacggagatggcagaagtctcctctgcagagaaacggc tgagaaacttggcttgctacgacttgggcctatccatgctgtcaatagtgtcaatactgaggctgatatcaaagagaagt acaaagaactttttattggtgttggccttcttaaagattatgagttgaagttaaacatcgataactcggtgaagccggtg gcgcaaccagtccgcaggattccctttggtgtacgagagaaagtcaagagaaagttagatgaattgttggagagtggaat catagaggaggtgcctgaaggaccaacagggtgggtttcaccacttgtggttatacccaaggcggacggacatatcagga tttgtgtagatatgaggtgcgccaatcaagcaatagtgagagaacgtcagcccatccctacaataaaggaggtgctccaa gaccttaatggtagcatagtattcagtcgtgtggatctgaagtggggatttcatcagatacttctggccgaagagagcag acatgtgacaacgttcgttactcaccgtggtctctatagatatacccgactcatgtttggtgtcacttcagcacccgaaa agtaccaacaaatcatccgagacgtactgcgaggctgtgacggggtggctaatattgcggatgacctgataattcatgga cgaggggaggagcagcatgatgacaggctcttggctgtgctcgatcaattgaaggaaacaggtgtgacactgaacgaaga caatgtgaattcagattacccaggttgacattttttggacacgaagtaacacggaccggtatagaacccagtgaagagaa ggtcgcagcaatcagacgggtaggtccttcacagaatgtcagtgaagccagatctttcctcggtcttgcccagtttgtgt ctaagtttgtaccagatctgtcttccattgcagaacccatccagaggttaacccacaagaatactgagttcaaatggggc aaagaacaacaggtagcattcgagaagttaaaagagctgatcacacaggcggatgccttagcctacttcaatgtaaacag cagaacaagaattgtggcagacgcgtcaccggtagggcttggagcggatttaactcagctacatggaagtgaatggcgtg tgattgggtatgcttcgcgacatctgtctgatgtagagcggcggtatagccaaagggagacggatcataagcctctggag tacatctattcacagaaatcgaagccttctgcccgagtggaaagatgggtccttcgcttaaaggcttaccactttaaggt tgtttacagaccaggcaagaccaatattgcagatgccttgtccaggctgaattgcgggttccagagtaatgacggagaag attatgactttgtgcatgttgtggttgagaacagtgtttcttgtgctttgaaacctgctgaaatagaaaaggcttcagcc gagaacatggagctgaatctcatcaaagaacgtgtccaaacaggagattggagtcagtgtaatgtgcctgcgtacttgca tgtaaagaatgaattgtgtacgtatggtgaactgcttttacggggttccagactagtgattccccgagaactgcggccgc gtgttttggagttaagctacgagggacatcaaggcattgttaaaacaaaatgtagactgcgcagtaaagtatggttgccc aagttggatgcggatgcagagaagctgtgcaagagttgtcatggatgtcaagcagttagtgaatacactcccccagaacc tatggctcgagctttcccacccagtggcccttgggaagattgtgcagctgatattctgggtactcccttaccttcagggg aaagtttactggtggtggtagactattttagtagatattttgaagtggttattttgaggtcaacctttagcacaaggatc attgaaagtctaaaaccaatatttgcccggtttggagtgctgcatacgcttaagaccgactatgggcctcaactggtatc tggacagtttgaaaccttccttgcagagaatgggatagaacaccgagcaactcctcccttgtggccgcaggtcaacgggg aggtagaacgtcagaattgcacattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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atatcacacattttgagcgctgtgcgattgttaatggctggaatgaggaggacaaagcaatgtttttgacagctagtctt cgtggcgacagccgaaaactgttgagtggactgacggaattggaatgcaagcagtattcgaaaattgtggagcgactgca gctacgctttggagtggagaaacagttccaccaagccagactactgaatcgccggcaatttgaaggtgagagtttaccaa tgctagctattcgttctatgttggacttagcataccaagatttgggtgtcgctgtgcaggaacgctttgccgtacagcat tttcttgatgccttatatgacaaggatgatcggctgtacctcaggcgggaaaagccagaaacccttgaccaagccctttc ccttgctcgggagttagagtcccttcgcgtattagagaacaataattcattcagacggacggattgtaaagtcagggcta tggaaaccgaaaaaaagcaattgcaaatacaagttgatgagctgaaacgtcagatagactatcaacagcaacaactagaa gcataagaaaccatcataagctgattaaaccaatttgtaacacaacaagagcagccccaccccaacagaaaccgagtagc acagggtgcccatagtaggggtagattggagtgctggaactgtggagacggggaacacatgagaaaagaatgcccaaaac tcaaagcaagaccaaattccagtcaaccttcgggaaacgagaacagggtatcctcaagggcccagagggatgcctgaatg ataaagggccgcagttgaatgacaatgttgctgacaacttcaaagagagtgaaaacgtgactgtaatgcgtgattcgaaa ttccaaccatgtggactgtatgttattggatttattggacagtataaacttgtctggcttgtggacactggagccatgaa aaacattttatcctacgaatgttacaaaagattatccgaagatttacagtttccattgcatcagggtggttcacatgtgt tggttacagatggtcgcagagccaatacgtatggcagcgggaacttaactgtgaggatggaaggcaagacgataacctaa gtgtgttggtggcagacattgaagattgggaattcttgtctgctgttgatgcgaagatagatctagtcgaacagcaactg gtgataaatggggagaaaattgactgttataaccagaactgtcagcaaattagcttcaggtgtgtaacccgtcgtctctt gacaatacagccacatagtgagaaagtgatccccgtgcatctcctccatcgacagtcgttgcccggaactgccacgcaag gcttgcgaattttggagccctgtggcactcgccttcaggaaaaggactttacatcggcagaaccttggtttcggaggagg aaccagccttgtacctgtgcgaattctgaacacgtctgatcaaacacaaacccttggtgctcaactgttgtagccgtagc caaagcggtgactagtgttgcagagttggaattgcctcaagttgcttcagagagcaccacaagtgaagttcacaaaaacc acccagaggaagagtacaaggaaccattaccaggtcccctgaaagaactatgggagcgtagcgaagaacagttgacggag gaggaaagccatgcagttgctaagttgttacaccgacataaggacatattttccttatcagaacaggaacataaagacaa gtcataatgacaagtcaagacatcatcaagaagtcaaacagcccgtggtcgtcccctgtagtgttggtgacgaagaagga tggctctcaaagattctgtgtagactataggcaggtcaaagcagtgaccatttaaaatgcttatccactcccacgcattg acgattctctgtgtgccctctcaggggcaaaaatggctctccacgttggacctagcttctgggtattggcaagtcccaat ggatccagccagtagtggcaaagctgcatgcttttgtaaccaccagtggtctctacgaatggaacgtcatgccctttggc cttacgtcgtcaccaagtacttttgagcgatcgatggaattgcttttagcaggactgaggtttgaaacatgcttgattta cttagatgactccatagtgtatggaaaaacctttctggaagagctggagcgtttggaggaggtcttcgttcggtttgaat ctgctggacttaagcttaaacctggcaaatgtgtgctgttccagaagagcgtcgcatacttgggccacatcgtctctgag agaggtattgaaacagatccttctaaggttgaacgcgtgtgtgagtggccagcgccagagaatgccacggaagttaagag cttcctaggacttgccagttattatcgacgttttgttccaagctttgctcaagtggccaagcctcttcacagattaaccg aagctaaaattgactttgtctggacaccggagtgccagtcggcatttgaaatgctgaagaacctactgtctactgctcct gtattgtcatgtacggattttacagcggagtttatacttgactcggacaccagtaatcatggaatcggagctgtcttaag tcagctgaaagactgataagtttgaaagatttattcgaagattctctggctcaaatcagtaaaaacggattgccatgcag ttgaccccttattctacccagtaagatcaagttacaatcaagtagtgaaatcacgccttataaaatgtcgcgcatggg |
Protein
Protein ID | aug_v2a.24632.t1 |
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Definition | - |
>aug_v2a.24632.t1 MPGGGSNEGDGSSASASSEVSTPVAVEVGSLQPFQVKGDPHSVSQRWRKWKRAFQLYVLGKGITNDSQKRGLLLHTAGLD VQEFYFTLVPDGAEMNYAETFKGQKQGDGRRDWRNASSVNERGRKTNTNYVDSDAESGQNLTPNYVFSVGDRLGQRSGVV TIVVGGVHLPNVLIDSGATCNLLGQGTWEWLKSQNIQCQTRKEAKALFPYGNTKPLPTLGTLSTVIMSTDTGATFKTDFV VINGDGRSLLCRETAEKLGLLRLGPIHAVNSVNTEADIKEKYKELFIGVGLLKDYELKLNIDNSVKPVAQPVRRIPFGVR EKVKRKLDELLESGIIEEVPEGPTGWVSPLVVIPKADGHIRICVDMRCANQAIVRERQPIPTIKEVLQDLNGSIVFSRVD LKWGFHQILLAEESRHVTTFVTHRGLYRYTRLMFGVTSAPEKYQQIIRDVLRGCDGVANIADDLIIHGRGEEQHDDRLLA VLDQLKETGVTLNEDNVNSDYPEPIQRLTHKNTEFKWGKEQQVAFEKLKELITQADALAYFNVNSRTRIVADASPVGLGA DLTQLHGSEWRVIGYASRHLSDVERRYSQRETDHKPLEYIYSQKSKPSARVERWVLRLKAYHFKVVYRPGKTNIADALSR LNCGFQSNDGEDYDFVHVVVENSVSCALKPAEIEKASAENMELNLIKERVQTGDWSQCNVPAYLHVKNELCTYGELLLRG SRLVIPRELRPRVLELSYEGHQGIVKTKCRLRSKVWLPKLDADAEKLCKSCHGCQAVSEYTPPEPMARAFPPSGPWEDCA ADILGTPLPSGESLLVVVDYFSRYFEVVILRSTFSTRIIESLKPIFARFGVLHTLKTDYGPQLVSGQFETFLAENGIEHR ATPPLWPQVNGENITHFERCAIVNGWNEEDKAMFLTASLRGDSRKLLSGLTELECKQYSKIVERLQLRFGVEKQFHQARL LNRRQFEGWFTCVGYRWSQSQYVWQRELNCEDGRQDDNLSVLVADIEDWEFLSAVDAKIDLVEQQLVINGEKIDCYNQNC QQISFSGLYEWNVMPFGLTSSPSTFERSMELLLAGLRFETCLIYLDDSIVYGKTFLEELERLEEVFVRFESAGLKLKPGK CVLFQKSVAYLGHIVSERGIETDPSKVERVCEWPAPENATEVKSFLGLASYYRRFVPSFAQVAKPLHRLTEAKIDFVWTP ECQSAFEMLKNLLSTAPVLSCTDFTAEFILDSDTSNHGIGAVLSQLKD* |