Genome Projects

OIST Marine Genomics Unit since 2008

Genome Sequencing / Annotation Projects
Genome Sequencing Projects
Cots

Acanthaster planci

The Whole Genome Shotgun Sequencing Project of Okinawan and Australian crown of thorns starfish, Acanthaster planci.

version: 1.0

Adi

Acropora digitifera

The whole genome shotgun sequence project of the Okinawan staghorn coral, Acropora digitifera.

version: oist_v1.1

Aurantiochytrium

Aurantiochytrium sp. kh105

version:

Chlorellaa99

chlorellaA99

Genome sequencing of Chlorella sp. A99, the symbiotic algae in hydra

Green hydra harbors symbiotic Chlorella in the endodermal epithelial cells. They established mutualistic relationship. The algae provides photosynthesis products to hydra, in return hydra gives nutrition includ...

version: 0.1

49 mozuku

Cladosiphon okamuranus

Okinawa Mozuku Genome Project 160227

version: 0.4

Kairou

Euplectella aspergillum

RNA sequence project of deep sea glass sponge, Euplectella aspergillum.

version: version 0.1

Lingula

Lingula anatina

The genome project of the lingulid brachiopod Lingula anatina.

The 425-Mb genome (3,830 scaffolds with contig N50 in 56 kbp and scaffold N50 in 294 kbp) was sequenced from male gonads with four different NGS platforms, including 454 (GS FLX+), Illumina (MiSeq and HiSeq 2500), and...

version: 1.0

Lingula2

Lingula anatina

Brachiopod, Lingula anatina version 2

version: 2.0

Nemertean

Notospermus geniculatus

Nemertean, Notospermus geniculatus

version: 2.0

Catfish

Pangasianodon hypophthalmus

version: catfish version 2018

Phoronid

Phoronis australis

Phoronid, Phoronis australis

version: 2.0

Pfucata 3

Pinctada fucata

This is the latest version of assembly and gene models. The whole genome shotgun sequencing project of Japanese Pearl Oyster.

version: 1.0 + 1.1

Pfucata 3

Pinctada fucata

The whole genome shotgun sequencing projects of Japanese Pearl Oyster.

version: ver2.0

Ptychodera flava 02

Ptychodera flava

Genomic data for Hawaiian Acornworm, Ptychodera flava.

version: v3.0

Symc1

Symbiodinium minutum

The genome project for a clade-B1 symbiodinium.

version: symb_aug_v1.120123

37 cladea

Symbiodinium sp. clade A3

The genome project for a clade-A3 symbiodinium.

version: symbA.v1.0

40 cladec

Symbiodinium sp. clade C

The genome project for a clade-C symbiodinium.

version: symbC.v1.0

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