Gene
Gene Model ID | pfu_aug1.0_10345.1_39032 |
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Locus | scaffold10345.1 : 1 ... 9865 : - |
To GenomeBrowser | scaffold10345.1:1..9865 |
Genes list of scaffold | scaffold10345.1 |
Synonym | pfu_aug2.0_671.1_04468 |
Manual annotation
Study field | Reproduction |
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Gene name | C1q domain containing protein |
Description | Best hit to FR715645 (MgC1q66). 85 bits, 5e-15 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_10345.1_39032.t1 | 1 | 1 | C1q | 22 | 144 | 1.4e-21 | 76.8 | 2.5e-25 | 1.9e-21 | 76.3 |
Transcript
Transcript ID | pfu_aug1.0_10345.1_39032.t1 |
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Definition | - |
>pfu_aug1.0_10345.1_39032.t1 atgggtttatattacgttcgtagcttcaaaaccaacgtcaacaattcgacccagcatatggtagctttcacagcttgcca ttctaaaggttctacaattggcgttcaccagaccgtactctatgaccacgtcattacaaacatcggaaacgcttacgacg tcagggatggagaattcaacgtgccgtatgatggactttatacgttttccatcacaggaatggcatacgggaatactgac atgtatcttactctatttaaaaatggtgtctacgttcaaaaactgtacagtaatattggaaatgcagactcttcctcctt tactacgcatctttatcttcaagctggtgatgaaatttgggtagtcaatggcggacctaccagtgaccaacttcatcctg gaaattataattgtttttctggaattcttgttaaggaaaagcattga |
Protein
Protein ID | pfu_aug1.0_10345.1_39032.t1 |
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Definition | - |
>pfu_aug1.0_10345.1_39032.t1 MGLYYVRSFKTNVNNSTQHMVAFTACHSKGSTIGVHQTVLYDHVITNIGNAYDVRDGEFNVPYDGLYTFSITGMAYGNTD MYLTLFKNGVYVQKLYSNIGNADSSSFTTHLYLQAGDEIWVVNGGPTSDQLHPGNYNCFSGILVKEKH |