Gene
Gene Model ID | pfu_aug1.0_11799.1_60944 |
---|---|
Locus | scaffold11799.1 : 11784 ... 20635 : - |
To GenomeBrowser | scaffold11799.1:11784..20635 |
Genes list of scaffold | scaffold11799.1 |
Synonym | pfu_aug2.0_1919.1_31963 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | PFMG4 B |
Description | gb|AAZ76258.1| |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_11799.1_60944.t1 | 1 | 1 | C1q | 30 | 156 | 2.5e-21 | 75.9 | 4.0e-25 | 3.0e-21 | 75.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 5 |
>Adult tissues | |
mantle | 4 |
mantleEdge | 1 |
mantlePallium | 2 |
pearlSac | 1 |
Transcript
Transcript ID | pfu_aug1.0_11799.1_60944.t1 |
---|---|
Definition | - |
>pfu_aug1.0_11799.1_60944.t1 atgtttcgtacagaaatacttgtgatgttgacagtgatggccgtaacaatcaggggacagatatgtagtaatccagagaa agtttacttccaagcttggaattctgcaactttgacaaacatcaaaagcggccatatcttcgtcttcgatagaacaaaca caaaccatggaaatcactatgacagttccaatgggaattttaaagctcctagagacggcccgtacgtctttacatggacc gtcgttacccaggacaaatacagtataaatgttgaactgttccggaataacaaaagagtaagtcttgcacaagcagatgg tcagcccggaccacaaaatagttccggatctaacactgttgtgcttgatcttaagacaggtgacgtggtgaatcttagat gtggtggttggatgaaccagggtcagcgacagctttatggctatacacactctacattttccggatgggcactatga |
Protein
Protein ID | pfu_aug1.0_11799.1_60944.t1 |
---|---|
Definition | - |
>pfu_aug1.0_11799.1_60944.t1 MFRTEILVMLTVMAVTIRGQICSNPEKVYFQAWNSATLTNIKSGHIFVFDRTNTNHGNHYDSSNGNFKAPRDGPYVFTWT VVTQDKYSINVELFRNNKRVSLAQADGQPGPQNSSGSNTVVLDLKTGDVVNLRCGGWMNQGQRQLYGYTHSTFSGWAL |