Gene
Gene Model ID | pfu_aug1.0_11839.1_68415 |
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Locus | scaffold11839.1 : 2363 ... 15329 : - |
To GenomeBrowser | scaffold11839.1:2363..15329 |
Genes list of scaffold | scaffold11839.1 |
Synonym | pfu_aug2.0_1478.1_28307 |
Manual annotation
Study field | Transcription Factors |
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Gene name | Pfu-MITF-related2 |
Description | Best hit to CAI22453 transcription factor EB [Homo sapiens] by a BLASTP search against NCBI Homo sapiens nr database. We could not retrieve a bHLH domain, and therefore this gene is not included in the bHLH annotation paper. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_11839.1_68415.t1 | gi|241715136|ref|XP_002412122.1| | helix-loop-helix transcription factor, putative [Ixodes scapularis] | 6.0e-12 |
Transcript
Transcript ID | pfu_aug1.0_11839.1_68415.t1 |
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Definition | - |
>pfu_aug1.0_11839.1_68415.t1 tccaaaagtagaaatcaagaatgccagttttccattacggacgacgttgcggcagcagctcatgcgacagcagatgcagg atgaagataagaagaaggtcatcacacgacagcagctctcccttcctcagaccatcaacacacctatgtcacagtcgtat acaccggacgtacccacaaaaatcctcaaggtgaaaacaagattagagaatcctacacagttccatgtccaggaaaatca gaagcgtcagatttctcagttctttacgactgataccaaggtgctgcccagctcccttcccgtcattacccagacctctg tggccaacgtggcaccattaagcgggagtgcacctgttgaccctgacagtccgctatctgcaggattcagcagtgctgca acaagtgtctctgatatgaatgagtcgaaaggaggagaagattcaatataa |
Protein
Protein ID | pfu_aug1.0_11839.1_68415.t1 |
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Definition | - |
>pfu_aug1.0_11839.1_68415.t1 PKVEIKNASFPLRTTLRQQLMRQQMQDEDKKKVITRQQLSLPQTINTPMSQSYTPDVPTKILKVKTRLENPTQFHVQENQ KRQISQFFTTDTKVLPSSLPVITQTSVANVAPLSGSAPVDPDSPLSAGFSSAATSVSDMNESKGGEDSI |