Gene
Gene Model ID | pfu_aug1.0_1195.1_58407 |
---|---|
Locus | scaffold1195.1 : 78556 ... 87838 : + |
To GenomeBrowser | scaffold1195.1:78556..87838 |
Genes list of scaffold | scaffold1195.1 |
Synonym | pfu_aug2.0_456.1_20794 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | fgf19/21/23-like |
Description | NCBI BLASTP hit to ref|XP_003226252.1| [Anolis carolinensis] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1195.1_58407.t1 | 1 | 1 | FGF | 27 | 125 | 1.0e-10 | 41.4 | 1.5e-14 | 2.2e-10 | 40.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
8-16cell | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_1195.1_58407.t1 |
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Definition | - |
>pfu_aug1.0_1195.1_58407.t1 atgggggcacctgctagtccaagactattcaacggggtcaatccggaaattgataccaataaggaaattaaaactttctt tatgaggacgaaaaacgaaaaagtgctagaaattttagaagatggaacagtgcgaggatccgattgtgcaaatagtccca ccagatattcattgttagaaagtggatctcactgtcacagtacacgtaatgtattgatggtcaccttgttcggaaaggcc gccgagaggtttctctgcatccataaaaacgggacagtttatgcaaccaagagggagaatttctcggaggatgattgtgg ttttaacgtgattctggatagcagaggtagtgaactttaccctcgcgggaaatacaaacacgctgttcacggaagaccgc cacctagcggcaagggactgcgtcgttaccaactggctttaacgtgtagtaatgtggctatgtcgatatatacggggaga gataggaggaaacttataaacgatactctttttatagaagaaaaagtggacgcaaaagtagaaagccttaatgaatcttg tgatgttcgaacgactaaaaagtgtaaacacaatcattggtgtccagaattctacgatgtgaaaggtaggacgtatgtga aattctgtcgacgcgtcgtgaagaatttctttagtgccactttaagagattttaggttattccataaaagagattgttgg aatgtgttgaaaaaagtgcgactgtgtagagaaaggcggacaaaccgacactccggacagactcgccgacgtagacggag acatcaccacggaccatcccggggaaaacgatcggaccaagttgtagacttcgataagattctgcctcgttgtgtcccca cgtga |
Protein
Protein ID | pfu_aug1.0_1195.1_58407.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1195.1_58407.t1 MGAPASPRLFNGVNPEIDTNKEIKTFFMRTKNEKVLEILEDGTVRGSDCANSPTRYSLLESGSHCHSTRNVLMVTLFGKA AERFLCIHKNGTVYATKRENFSEDDCGFNVILDSRGSELYPRGKYKHAVHGRPPPSGKGLRRYQLALTCSNVAMSIYTGR DRRKLINDTLFIEEKVDAKVESLNESCDVRTTKKCKHNHWCPEFYDVKGRTYVKFCRRVVKNFFSATLRDFRLFHKRDCW NVLKKVRLCRERRTNRHSGQTRRRRRRHHHGPSRGKRSDQVVDFDKILPRCVPT |