Gene
Gene Model ID | pfu_aug1.0_12887.1_39407 |
---|---|
Locus | scaffold12887.1 : 11604 ... 13385 : - |
To GenomeBrowser | scaffold12887.1:11604..13385 |
Genes list of scaffold | scaffold12887.1 |
Synonym | pfu_aug2.0_1708.1_28482 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | Prisilkin-39 like |
Description | reciprocal BLASTN best hit to EU921665.1 Pinctada fucata prisilkin-39 mRNA |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_12887.1_39407.t1 | gi|334350827|sp|C0J7L8.1|PRSKL_PINFU | Prisilkin-39 [Pinctada fucata] | 2.0e-28 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantle | 1 |
mantleEdge | 1 |
mantlePallium | 1 |
Transcript
Transcript ID | pfu_aug1.0_12887.1_39407.t1 |
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Definition | - |
>pfu_aug1.0_12887.1_39407.t1 atgaaaggattcctgacactcttgctggtttgtgctatactcagtactgggtattgtcaaagtcgtcgaagagctgcact tactggattagtagctggtgccgccattggcgctttagctagtggtggtttaggtgctggtggtttcggtgtaggaggtg tcccagtaggagttggtgcggtcggagttccagttgctgttggcggtggtataccgtatggttacggcggatatagcggg tatggctacgggtatccagccggtggatatggtggatacagctacggatatccaactggtggatatggtggatacagcta cggatatccaacgggaggatacagcggatacagctacggatatccaacgggaggatacagcggatacagctacggatatc caacgggaggatacagcggatacagctacggatatccaacgggaggatacagcggatacagctacggatatccaacggga ggatacagcggatacagctacggatatccaacgggaggatacagtggatacagctatccaacgggcggatacagtggata cagttcaaccccaggatatggatattacggctcaggctctggaatgggtggaatgcgttcaggatatagttattacagca gccccgccccatcatattacagttctggtagtatgacaccaggatacggatattacagctcaggctctggaataggagga ggaatgggttcaggatatagctattacagcagccccgccccttcatattacagttctagtgtgagtccaggatacggata ttacggctcaggctctggaatgagaggatatggttattacggtagcagcacacctatgtattacggttctagaagtacgg gttatggtcccttttcttctggattgggaggaatgggttcagggtatagttattacagcagcagcaccccatcatattac agttctggtagtatgacaccaggatacggatattacggcagtactagctatccaggatcagggtatggctcttacagtta tcgtacaactaactatcaaccctcctcttatggatattcctcttatgggaccacgtatccaggacacgggcattggcacg gtcacaaggactgttaa |
Protein
Protein ID | pfu_aug1.0_12887.1_39407.t1 |
---|---|
Definition | - |
>pfu_aug1.0_12887.1_39407.t1 MKGFLTLLLVCAILSTGYCQSRRRAALTGLVAGAAIGALASGGLGAGGFGVGGVPVGVGAVGVPVAVGGGIPYGYGGYSG YGYGYPAGGYGGYSYGYPTGGYGGYSYGYPTGGYSGYSYGYPTGGYSGYSYGYPTGGYSGYSYGYPTGGYSGYSYGYPTG GYSGYSYGYPTGGYSGYSYPTGGYSGYSSTPGYGYYGSGSGMGGMRSGYSYYSSPAPSYYSSGSMTPGYGYYSSGSGIGG GMGSGYSYYSSPAPSYYSSSVSPGYGYYGSGSGMRGYGYYGSSTPMYYGSRSTGYGPFSSGLGGMGSGYSYYSSSTPSYY SSGSMTPGYGYYGSTSYPGSGYGSYSYRTTNYQPSSYGYSSYGTTYPGHGHWHGHKDC |