Gene
Gene Model ID | pfu_aug1.0_1303.1_07891 |
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Locus | scaffold1303.1 : 3975 ... 15665 : - |
To GenomeBrowser | scaffold1303.1:3975..15665 |
Genes list of scaffold | scaffold1303.1 |
Synonym | pfu_aug2.0_19.1_30005 |
Manual annotation
Study field | other developmental genes |
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Gene name | FGFR |
Description | NCBI blastp hit to dbj|BAI67805.1| fibroblast growth factor receptor [Idiosepius paradoxus] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1303.1_07891.t1 | 2 | 1 | Pkinase_Tyr | 204 | 245 | 0.0 | 260.6 | 1.9e-08 | 2.5e-05 | 23.4 |
pfu_aug1.0_1303.1_07891.t1 | 2 | 1 | Pkinase | 206 | 247 | 1.1e-35 | 123.0 | 6.7e-05 | 0.091 | 11.9 |
pfu_aug1.0_1303.1_07891.t1 | 2 | 2 | Pkinase_Tyr | 265 | 428 | 0.0 | 260.6 | 0.0 | 0.0 | 234.9 |
pfu_aug1.0_1303.1_07891.t1 | 2 | 2 | Pkinase | 265 | 426 | 1.1e-35 | 123.0 | 1.8e-34 | 2.5e-31 | 108.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1303.1_07891.t1 | gi|284999805|dbj|BAI67805.1| | fibroblast growth factor receptor [Idiosepius paradoxus] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_1303.1_07891.t1 |
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Definition | - |
>pfu_aug1.0_1303.1_07891.t1 atgatgtatataagtgacaccatattactgttggacctgtattacattaggcaatcaaatttcaatgtcactgacccaga aattctacgcctactcaacgtgacgcacgatgatgcaggatggtacacatgtttggttagcaacagtctgggaaggtctt atcaaagtgcttggttgaccgtagaggagatagaagctgcatggttgtcacaaaatcttacagaggatgaattttttaat ccagttacacccgagacgcagcgatcagtccagaatttgaaggaaggaacagaacaaaccgtcattatcgtcgtgggaac atcagtcgcagccactctcctaattgtatttgttgtgatggccgtttgtttccatagacatcgtcgtaacggcaaaaatt acagaccaatcaaacgtgtcattgtcatgaaaccaaatgagttttactatccgaacaagagcagtgcttacgagggcagt cctatgttagtacccacagttagaatcgaggctggaagtcgtaggagactgtcgtctgatctcactgtcatgtccgagta tgaccttcctctcgataaaacatgggaaatctgtagagaaaagttgttgatgggtgcgccccttggagaaggagcttttg gattggttatgaaggcagaggcttctgggataggaaataaaaatggaacaactacagtagctgttaaaatgttgaaagat agaaaaaaaaaaangcggagtcgacgaccaccaaacagtggatatgagaagcctatacaaggtgactctaaagaaaagag ggtcttatcagagaaagatctaatatcattcgcttaccagatagcaagaggaatggactacctagcctcaagacagtgta tacacagagatcttgccgctaggaatgttttagtgtcggaggactacgtcctaaaaattgcagactttggtctaactaga aatattaccaacatcgactattataggaaaacgggtgatggtcgtttgccagtaaagtggatggcccctgaagctttgtt cgatagaaagtatacttctaagagtgatgtatggtcatttggtgtactgctatgggaaatcttcacactgggcggcaacc cctacccctccgtccctgttgagaggctttttgagctgctaagggaggggcatcgaatggagagacccccctacgcctcc caggaaatgtataacatgatgcttcattgctgggccaccaacccaacccgccgtcccacctttatcaacctggttaacga gcttgacaagatgttaagctcgcggggtgaggaatatttggatttagagccattggaaactcctataagcacatcagaca gtcagtattcctcaatgtcacggagttttagtagtgttacggacgatattatgggtgcaaacttaacgactagcgcaagt gactcggagtga |
Protein
Protein ID | pfu_aug1.0_1303.1_07891.t1 |
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Definition | - |
>pfu_aug1.0_1303.1_07891.t1 MMYISDTILLLDLYYIRQSNFNVTDPEILRLLNVTHDDAGWYTCLVSNSLGRSYQSAWLTVEEIEAAWLSQNLTEDEFFN PVTPETQRSVQNLKEGTEQTVIIVVGTSVAATLLIVFVVMAVCFHRHRRNGKNYRPIKRVIVMKPNEFYYPNKSSAYEGS PMLVPTVRIEAGSRRRLSSDLTVMSEYDLPLDKTWEICREKLLMGAPLGEGAFGLVMKAEASGIGNKNGTTTVAVKMLKD RKKKXRSRRPPNSGYEKPIQGDSKEKRVLSEKDLISFAYQIARGMDYLASRQCIHRDLAARNVLVSEDYVLKIADFGLTR NITNIDYYRKTGDGRLPVKWMAPEALFDRKYTSKSDVWSFGVLLWEIFTLGGNPYPSVPVERLFELLREGHRMERPPYAS QEMYNMMLHCWATNPTRRPTFINLVNELDKMLSSRGEEYLDLEPLETPISTSDSQYSSMSRSFSSVTDDIMGANLTTSAS DSE |