Gene
Gene Model ID | pfu_aug1.0_14312.1_32434 |
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Locus | scaffold14312.1 : 15932 ... 33875 : - |
To GenomeBrowser | scaffold14312.1:15932..33875 |
Genes list of scaffold | scaffold14312.1 |
Synonym | NA |
Manual annotation
Study field | Biomineralization |
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Gene name | TGF beta receptor1B |
Description | NCBI blastp hit to ref|XP_001184902.1|[Strongylocentrotus purpuratus] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_14312.1_32434.t1 | 1 | 1 | Vps39_2 | 250 | 315 | 2.5e-12 | 46.9 | 1.2e-15 | 8.6e-12 | 45.1 |
Transcript
Transcript ID | pfu_aug1.0_14312.1_32434.t1 |
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Definition | - |
>pfu_aug1.0_14312.1_32434.t1 atgtttgtaacttccgcaggcgtatcccagcgacctccgttacagtggtcagaaaatctggtcagcatcagctatgtaca tccttatatcattgccatgaacgatgaattcatcacaattcacagtattttagatcagcaacagaagcaagctataccat ttcagggcggcacatttatggagaattttgatggtcgattgtttgttgcatcgggaagagaaatctactgcttagtacct gtggcatgggagaaacaggttcaagcgttacttcaggataaacgggtcactgaggcattagaattggcaaaaaatgccaa taaaacgggcagcaaagataaatacttaaagatctataagagattacagcaacaggcagcgtttatagagttctctcagc aacactttgaggaagctgaagatttgtttaaagctggccagttggatgttagagaaatttttactgagcgacctcagaat gagctgccgtcggaacgacttcgaccagagactgtgatcgattacttacatagattccctaaagctgtgatatcatacct cgagtatctagtctttcagaaaaagttagagaaaaaaatatccgccgtgtctcatactcgatcgtcgattaaaaacgaaa tatcaatttatttcattgaacgtttattgtccagacggcataaagatcaacttgttcgacctgctgtagaactgctcaat agtaacattgctgattttgacaccattaagacggtgcgtaaaagcatgaacttaagtcggaatacacggatagagagaat gatgtccagaggagagaacctacaagtcaaacagaactgtatagagagagaaagggagtacgttacaatgaatgatgata ggttatgtgccgtgtgtagcagagctttcagtgatcctacttttgtgcgctatccaaacggtgttaattgtatacgaagt tga |
Protein
Protein ID | pfu_aug1.0_14312.1_32434.t1 |
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Definition | - |
>pfu_aug1.0_14312.1_32434.t1 MFVTSAGVSQRPPLQWSENLVSISYVHPYIIAMNDEFITIHSILDQQQKQAIPFQGGTFMENFDGRLFVASGREIYCLVP VAWEKQVQALLQDKRVTEALELAKNANKTGSKDKYLKIYKRLQQQAAFIEFSQQHFEEAEDLFKAGQLDVREIFTERPQN ELPSERLRPETVIDYLHRFPKAVISYLEYLVFQKKLEKKISAVSHTRSSIKNEISIYFIERLLSRRHKDQLVRPAVELLN SNIADFDTIKTVRKSMNLSRNTRIERMMSRGENLQVKQNCIEREREYVTMNDDRLCAVCSRAFSDPTFVRYPNGVNCIRS |