Gene
Gene Model ID | pfu_aug1.0_14492.1_03507 |
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Locus | scaffold14492.1 : 421 ... 12275 : - |
To GenomeBrowser | scaffold14492.1:421..12275 |
Genes list of scaffold | scaffold14492.1 |
Synonym | pfu_aug2.0_5649.1_32813 |
Manual annotation
Study field | Reproduction |
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Gene name | C1q domain containing protein |
Description | Best hit to FR715662 (Mg1q83). 90 bits, 3e-20 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_14492.1_03507.t1 | 1 | 1 | C1q | 24 | 119 | 9.3e-15 | 54.7 | 9.1e-19 | 1.3e-14 | 54.2 |
Transcript
Transcript ID | pfu_aug1.0_14492.1_03507.t1 |
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Definition | - |
>pfu_aug1.0_14492.1_03507.t1 atgattcatcaactggaaaatacggttcacaacttgttgaataatacacaaaaggacccacacatcggattttatgcaca actatccacagacaagagtaatctaggagatgccagagcgatcgagtttgacaaagtaatcacaaacgaggggaattcat atgatcgctaccatggtcacttcaccgctccagtaaacggaatgtacttactatctgcatccgtgatggccgtcccttat catgctttatcatgcgagatagtcaagaatggggttactttcgcctacttgtatggcggtgcaggaaattacattgctaa tacccatacatccgtcattatgttgaacgcgggtgatatgggacgagattatgtggtgtacgagttggttatggtactag tacatgagtatttatattcgtcggtacgtaaaaagggaggtactgacgaaaatgacgaaaattggtacctgacgaataaa aattaa |
Protein
Protein ID | pfu_aug1.0_14492.1_03507.t1 |
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Definition | - |
>pfu_aug1.0_14492.1_03507.t1 MIHQLENTVHNLLNNTQKDPHIGFYAQLSTDKSNLGDARAIEFDKVITNEGNSYDRYHGHFTAPVNGMYLLSASVMAVPY HALSCEIVKNGVTFAYLYGGAGNYIANTHTSVIMLNAGDMGRDYVVYELVMVLVHEYLYSSVRKKGGTDENDENWYLTNK N |