Gene
Gene Model ID | pfu_aug1.0_14895.1_10758 |
---|---|
Locus | scaffold14895.1 : 12496 ... 25651 : + |
To GenomeBrowser | scaffold14895.1:12496..25651 |
Genes list of scaffold | scaffold14895.1 |
Synonym | NA |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | shematrin-6 |
Description | reciprocal BLASTN hit to NCBI Accession AB244424 |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_14895.1_10758.t1 | gi|93102309|dbj|BAE93438.1| | shematrin-6 [Pinctada fucata] | 4.0e-30 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantle | 1 |
mantleEdge | 1 |
mantlePallium | 1 |
Transcript
Transcript ID | pfu_aug1.0_14895.1_10758.t1 |
---|---|
Definition | - |
>pfu_aug1.0_14895.1_10758.t1 atgttgcgatttgcctgcatcgccttatttgttgctctcgccaatgctggaggcagcagcaataaatatccatcagtaat tgacctaggaacgtccgtcgctcctgcaaccagctcagttgcaccaggaataattggatctggcatcggatctattggag gtgtcggagttctaccagtgggaggagtcggcattggacccgtgggaggagtcggcattggacccgtgggaggaatcgga gttggaccagtattgggttatggcggacctgatgtcgccaccttcagaggaaacaccttcggaacattggcaactggaac aattaactcacttactggaggctactccgtaggatatggtggaaatctagcattaagtggaggactcagtctcggtcttg gaggtgctgttggtcttggaggtgctggtggtctcggcgttcttggaggctacggtgtaggacctgtaggggttggagca gtcggaggaggagtaggagccatcgggggcgttggctcaattggcgtaggaggtgtcggcggcggagttggcatccttgg aggtggtggtcttggcggcaatgttgcttcattccaaggacatacatacggaccaattgcaactggttcaatcacctcga acacaggaggtgtaattccatatggtggaatcataggtctatcccgtggcattggaccttatggactcggatctggaata ggcggtggtgtcttagctggacctggtttaggtggc |
Protein
Protein ID | pfu_aug1.0_14895.1_10758.t1 |
---|---|
Definition | - |
>pfu_aug1.0_14895.1_10758.t1 MLRFACIALFVALANAGGSSNKYPSVIDLGTSVAPATSSVAPGIIGSGIGSIGGVGVLPVGGVGIGPVGGVGIGPVGGIG VGPVLGYGGPDVATFRGNTFGTLATGTINSLTGGYSVGYGGNLALSGGLSLGLGGAVGLGGAGGLGVLGGYGVGPVGVGA VGGGVGAIGGVGSIGVGGVGGGVGILGGGGLGGNVASFQGHTYGPIATGSITSNTGGVIPYGGIIGLSRGIGPYGLGSGI GGGVLAGPGLGG |