Gene
Gene Model ID | pfu_aug1.0_1754.1_22750 |
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Locus | scaffold1754.1 : 21526 ... 30278 : + |
To GenomeBrowser | scaffold1754.1:21526..30278 |
Genes list of scaffold | scaffold1754.1 |
Synonym | pfu_aug2.0_1565.1_18406 |
Manual annotation
Study field | Environmental Response |
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Gene name | alpha-2 adrenergic receptor |
Description | BLASTP top hit to XP_003401590.1 [Bombus terrestris] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1754.1_22750.t1 | 2 | 1 | 7TM_GPCR_Srsx | 54 | 249 | 7.0e-10 | 38.4 | 6.9e-12 | 2.5e-08 | 33.3 |
pfu_aug1.0_1754.1_22750.t1 | 1 | 1 | 7tm_1 | 56 | 463 | 0.0 | 271.5 | 0.0 | 0.0 | 270.6 |
pfu_aug1.0_1754.1_22750.t1 | 2 | 2 | 7TM_GPCR_Srsx | 411 | 477 | 7.0e-10 | 38.4 | 0.00023 | 0.87 | 8.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1754.1_22750.t1 | gi|340726490|ref|XP_003401590.1| | PREDICTED: alpha-2B adrenergic receptor [Bombus terrestris] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_1754.1_22750.t1 |
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Definition | - |
>pfu_aug1.0_1754.1_22750.t1 atggaaaacaaatcagaaaaagccgattcgtgggaaaatttgacattaaacaacaattccacaataagaggtctggaggg taatgaactgccaagtggttatagtacaccacatatggtgattactgcggttttggttagcattattattctaacaatag ttttcggaaacttgcttgttgttgtggctatctatactgaccgaaatttgaagtcaaagcagaattggttcattgcttca ctggcggttgccgacttcatgttgggattagtcattatgcctttttccttggctaacgagctgatgggatactggtattt tggatcagtctggtgtgacttatggaaagctatcgatgtattcacctgcactgcatcaattctcagcatttgtctcatta gtttagatagatactggtcaataaccagggctattgaatattctcgccagaggacttccaaacgggcagccctgatgatt tcagcggtttggatattatcagccattatttgtgtcccaccgttaattggttggaaaaatccccttcctgttactgaata cccactttgtgtattaagtgacgatataggctatgtttggtattcttgtatgggctccttttatatcccagcagtcatca tggtatttgtttattacaaaatctatggcgctgccaaggctagggccaatcgtaattctaaaatgaaaattgaaaaggga aggaaattgaacgaaaaggaaacaaaaccaaataatgaacaaaaagatatcaagtctttagaggttgttgtcaaagacgc aaatctccaagtccccgatatggattgcccttcagccttgtccgacgatgaaagtacatggccaatataccagaaaccac ttaatgtcagagcaacattagatgaaaaagcaaaattattgcagacatcaaaggggatagaagaaaagaatccatcccaa aatgatacggataatgaccagccttcacttagtttgacgagagttcctagtaatgaagagcctagtgttatttatgatga agttgttgacgtttccacttcatctgaatacggaaaacatattgacgaaacaactgatgacataccaatgaaggaaagta aatcagtatctttacctataaaaatacaaagtgcctcgacaaatgatgccataaggaaattggaaagtcaaaaaagaaag cttgccaaagctcgtgagagacgggcaaccattgttcttgggcttgttatggcggcctttattttgtgttggtttccttt ttttacgttatacgttataacttcaatgtgcctctgtattccagaaatcgtttttaatgtgtgcttttgggctggatatt gtaattcggccctcaatccaatcatttatactgtattcaatcgagattttagacaagcattcaaaaagatcctggtggga aagatttcccgccgatga |
Protein
Protein ID | pfu_aug1.0_1754.1_22750.t1 |
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Definition | - |
>pfu_aug1.0_1754.1_22750.t1 MENKSEKADSWENLTLNNNSTIRGLEGNELPSGYSTPHMVITAVLVSIIILTIVFGNLLVVVAIYTDRNLKSKQNWFIAS LAVADFMLGLVIMPFSLANELMGYWYFGSVWCDLWKAIDVFTCTASILSICLISLDRYWSITRAIEYSRQRTSKRAALMI SAVWILSAIICVPPLIGWKNPLPVTEYPLCVLSDDIGYVWYSCMGSFYIPAVIMVFVYYKIYGAAKARANRNSKMKIEKG RKLNEKETKPNNEQKDIKSLEVVVKDANLQVPDMDCPSALSDDESTWPIYQKPLNVRATLDEKAKLLQTSKGIEEKNPSQ NDTDNDQPSLSLTRVPSNEEPSVIYDEVVDVSTSSEYGKHIDETTDDIPMKESKSVSLPIKIQSASTNDAIRKLESQKRK LAKARERRATIVLGLVMAAFILCWFPFFTLYVITSMCLCIPEIVFNVCFWAGYCNSALNPIIYTVFNRDFRQAFKKILVG KISRR |