Gene
Gene Model ID | pfu_aug1.0_18785.1_18571 |
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Locus | scaffold18785.1 : 8431 ... 10742 : - |
To GenomeBrowser | scaffold18785.1:8431..10742 |
Genes list of scaffold | scaffold18785.1 |
Synonym | pfu_aug2.0_2930.1_02295 |
Manual annotation
Study field | Reproduction |
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Gene name | cytidine deaminase |
Description | Best hit to EU101721 (abalone). 168 bits, 4e-40 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_18785.1_18571.t1 | 1 | 1 | dCMP_cyt_deam_1 | 3 | 98 | 1.0e-18 | 66.8 | 2.5e-22 | 1.2e-18 | 66.5 |
pfu_aug1.0_18785.1_18571.t1 | 2 | 1 | dCMP_cyt_deam_2 | 4 | 68 | 8.0e-09 | 35.5 | 5.5e-12 | 2.7e-08 | 33.8 |
pfu_aug1.0_18785.1_18571.t1 | 2 | 2 | dCMP_cyt_deam_2 | 119 | 131 | 8.0e-09 | 35.5 | 0.25 | 1200.0 | -0.6 |
Transcript
Transcript ID | pfu_aug1.0_18785.1_18571.t1 |
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Definition | - |
>pfu_aug1.0_18785.1_18571.t1 acaagcgtatccaggacttggtgaaggcagcgatagaggtcaaagccaacgcctactgtccttacagcaactttcgtgtt ggtgcttcactgctgactgaaaacgatgttattgtaacaggctgtaacgtagagaatgcatcttatgggctatctgtttg tgcggaacgagtagctattatgtctgctgtgtcacaaggtcacaccaagttcaaggctgcgacagtttcatgtgacatta aaggagacttcaaagctccgtgtggtgcttgtagacagttttatgccgagttcaacttgaaccttgacctttacctagtg aagccagacaatacagcgaaatgtgtcaaaatcagagacgttttacccatggcgtttacaccgcagtcactcgaggaaga cagaatctaa |
Protein
Protein ID | pfu_aug1.0_18785.1_18571.t1 |
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Definition | - |
>pfu_aug1.0_18785.1_18571.t1 KRIQDLVKAAIEVKANAYCPYSNFRVGASLLTENDVIVTGCNVENASYGLSVCAERVAIMSAVSQGHTKFKAATVSCDIK GDFKAPCGACRQFYAEFNLNLDLYLVKPDNTAKCVKIRDVLPMAFTPQSLEEDRI |