Gene
Gene Model ID | pfu_aug1.0_192.1_22046 |
---|---|
Locus | scaffold192.1 : 20727 ... 25535 : - |
To GenomeBrowser | scaffold192.1:20727..25535 |
Genes list of scaffold | scaffold192.1 |
Synonym | pfu_aug2.0_1281.1_04939 |
Manual annotation
Study field | other developmental genes |
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Gene name | ADMP-like |
Description | NCBI BLASTP hit to ref|NP_001158394.1| |
mRNA evidence |
Study field | other developmental genes |
---|---|
Gene name | ADMP-like |
Description | NCBI BLASTP hit to ref|NP_001158394.1| |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_192.1_22046.t1 | 3 | 1 | TGFb_propeptide | 2 | 108 | 2.6e-18 | 66.2 | 1.0e-21 | 5.1e-18 | 65.2 |
pfu_aug1.0_192.1_22046.t1 | 3 | 2 | TGFb_propeptide | 148 | 169 | 2.6e-18 | 66.2 | 0.14 | 680.0 | -0.7 |
pfu_aug1.0_192.1_22046.t1 | 3 | 3 | TGFb_propeptide | 151 | 180 | 2.6e-18 | 66.2 | 0.095 | 470.0 | -0.2 |
pfu_aug1.0_192.1_22046.t1 | 1 | 1 | TGF_beta | 233 | 337 | 1.9e-36 | 124.4 | 7.80001e-40 | 3.9e-36 | 123.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_192.1_22046.t1 | gi|259013378|ref|NP_001158394.1| | anti dorsalizing morphogenetic protein precursor [Saccoglossus kowalevskii] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_192.1_22046.t1 |
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Definition | - |
>pfu_aug1.0_192.1_22046.t1 atgcatttttattacaacatctcgtaccttaatgaaatggagaaaatccttgcagctgaatttcatgtattcaaaatgag accagcaccctccgcacatgcgcatgcaaattctcatgtaatggagataaagatctaccaaatcttggacccaacaaaca tatatagccttaattctttgcgccttttagacgctcgcagagttagcactcatggccatgggtggtacgtttttcaagtt aagaaagcagtggaatgctgggtcaatggaacatatcctaatcatgattatctgcaaataaaagaagatattttgaagaa agaaagaatgactcagttcaacagaaaagatttcaaacacgctttgaaatttctgaacgaaagggacagggatgaattgc aaaatgaacatttaaagaaactattaggtataaattcatcacattccagaagtagaagaagtgctaatgttacaatttca gtgacaagtaaaaagaaacgtaaattaagtaaagaagagcgtaggaaaagaaagttggcaaggaaaaatagaaaaggaaa gaggaaacgtttatccaaggaagaaagacgaaaaagaagaaaaatgaggagagaagaaagaaagagacaaagagaaattc tcaaacagggaaaagggaagagggcattagattattttagttataatcgtaaacgaaggaattgtgcaaagcaccagtta tacgtagacttcgacgaaataggttggtcggggtggataatttcacccaaaggttacaatgcctatcattgcaaagggga gtgtccctttcccctcggacaagggcaaaagccaaccaaccatgctacagtacaaagtatagttcatgctttgaaagtag gaaaggacgtttcgacgccttgttgtgttccaaataagttgtattcaataagtttattgtactttgacgatgatgagaat gtcatattaaagcaatacgacgatatggtggccgccagttgtggatgccattaa |
Protein
Protein ID | pfu_aug1.0_192.1_22046.t1 |
---|---|
Definition | - |
>pfu_aug1.0_192.1_22046.t1 MHFYYNISYLNEMEKILAAEFHVFKMRPAPSAHAHANSHVMEIKIYQILDPTNIYSLNSLRLLDARRVSTHGHGWYVFQV KKAVECWVNGTYPNHDYLQIKEDILKKERMTQFNRKDFKHALKFLNERDRDELQNEHLKKLLGINSSHSRSRRSANVTIS VTSKKKRKLSKEERRKRKLARKNRKGKRKRLSKEERRKRRKMRREERKRQREILKQGKGKRALDYFSYNRKRRNCAKHQL YVDFDEIGWSGWIISPKGYNAYHCKGECPFPLGQGQKPTNHATVQSIVHALKVGKDVSTPCCVPNKLYSISLLYFDDDEN VILKQYDDMVAASCGCH |