Gene
Gene Model ID | pfu_aug1.0_20175.1_69322 |
---|---|
Locus | scaffold20175.1 : 3450 ... 7605 : - |
To GenomeBrowser | scaffold20175.1:3450..7605 |
Genes list of scaffold | scaffold20175.1 |
Synonym | pfu_aug2.0_715.1_17768 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | Pif 177 |
Description | Pif 177 (Pif 80) partial sequence, hit to BLAST (NCBI, BAH97338.1) |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_20175.1_69322.t1 | gi|269969412|sp|C7G0B5.1|PIF_PINFU | Protein PIF [Pinctada fucata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantle | 2 |
Transcript
Transcript ID | pfu_aug1.0_20175.1_69322.t1 |
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Definition | - |
>pfu_aug1.0_20175.1_69322.t1 atgacgacgacaaaaaagctcagaatgaaaagagacgaacgaagcagaaaagattacctaaaagctatattaaaaagaga tgatagaaaagataagactgatgatacgaaaggaaggagaataattgatagaaacgatataatcgatgacaggagaggta gaaggaaagacgatagaaaggatggaggaagagacgatggaaaagatggcagaagagacgataggaaagataacagatta gatgacataaaggataaaaacgatgaaccaatgactctgatttcaaatggagaatgtgacaattttgaattgaatgactg tttcgaaaagccatcgatagccattacgactggaaagaagtctgctggattcagtgttacctcttctgaaaaagatgagg tagatctagaaattgatgaagacaagaaagggtatctctgggataaggaagatggacctgatagaaatggaaaagataaa gacagaaatggcgatagatcggacgacaggagaggctattactggaagaaaaaagataaagatgataacggaaaggataa agacaaaaagggggataaatccgacgataagaaaggttattattggaagaaagataaggatgataaaaatggaaaagata aagacaaaagaagggacaaatcagacgacaaaaagagcctcgacgacattgtgagggaaatagaaagaagcaagggcaat ggtaaagatgacaacaaagacgacgaagatgacgacaagaaaggatggaagacggtctcactgaaaataagtaacggaca tattaggggaagaagggatgatagagaagataaagacgttttggatggtgatttgaagacgacgttctccggcttccaaa taggtcaaggagctagcaacaagaactttaaaggttacatggatgagaacaaatactggaccgagtttaccgttgttttc tttgaaatctactattcacccttccacagttcccgctatttcattgtttttgctccaaaaaaaaagcgcttactctaa |
Protein
Protein ID | pfu_aug1.0_20175.1_69322.t1 |
---|---|
Definition | - |
>pfu_aug1.0_20175.1_69322.t1 MTTTKKLRMKRDERSRKDYLKAILKRDDRKDKTDDTKGRRIIDRNDIIDDRRGRRKDDRKDGGRDDGKDGRRDDRKDNRL DDIKDKNDEPMTLISNGECDNFELNDCFEKPSIAITTGKKSAGFSVTSSEKDEVDLEIDEDKKGYLWDKEDGPDRNGKDK DRNGDRSDDRRGYYWKKKDKDDNGKDKDKKGDKSDDKKGYYWKKDKDDKNGKDKDKRRDKSDDKKSLDDIVREIERSKGN GKDDNKDDEDDDKKGWKTVSLKISNGHIRGRRDDREDKDVLDGDLKTTFSGFQIGQGASNKNFKGYMDENKYWTEFTVVF FEIYYSPFHSSRYFIVFAPKKKRLL |