Gene
Gene Model ID | pfu_aug1.0_2055.1_15695 |
---|---|
Locus | scaffold2055.1 : 46692 ... 52945 : - |
To GenomeBrowser | scaffold2055.1:46692..52945 |
Genes list of scaffold | scaffold2055.1 |
Synonym | pfu_aug2.0_3829.1_32561 |
Manual annotation
Study field | Reproduction |
---|---|
Gene name | C1q domain containing protein |
Description | Best hit to MgC1q36, 65 bits, 4e-09 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2055.1_15695.t1 | 1 | 1 | C1q | 36 | 157 | 1.9e-18 | 66.7 | 3.1e-22 | 2.3e-18 | 66.4 |
Transcript
Transcript ID | pfu_aug1.0_2055.1_15695.t1 |
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Definition | - |
>pfu_aug1.0_2055.1_15695.t1 atgcaacacccgtcgcaacagctccatggaaacctgtcaaatgcggagattgtctctatgtatattttgatgtacagatc aggtgtagcgtgtgaaaaaccagtcgtattttcgactcgcctctccaagaacttgtacccccttggcaaaaatcagatta ttacttacgacgatgtgcttaccaatgtggaaggtggatatgacaaggttaccggcattttcgaggcaccatttgctggc ctgtaccagttgatagcaacaatgtggtcaaacgatggctaccaagtggacatagaaatgattcacaatggaactgatgt ctgctacgctaaatcaacatctaagaatcagtctatgagcatgtgtgctagtgttatatccatgcaggaaaacggtcggg tgtgggtcaggcatctcaacaacataggcaactacgcttatgggaacctctacgccactttttcgggtcataagataatg tag |
Protein
Protein ID | pfu_aug1.0_2055.1_15695.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2055.1_15695.t1 MQHPSQQLHGNLSNAEIVSMYILMYRSGVACEKPVVFSTRLSKNLYPLGKNQIITYDDVLTNVEGGYDKVTGIFEAPFAG LYQLIATMWSNDGYQVDIEMIHNGTDVCYAKSTSKNQSMSMCASVISMQENGRVWVRHLNNIGNYAYGNLYATFSGHKIM |